Viral OTU vOTU-009757

vOTU: vOTU-009757

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-009757
Number of Genomes	19
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 → vSUBFAM-00597 → vGENUS-01083 → vSUBGEN-03053 → vOTU-009757
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Rikenellaceae → Alistipes → Alistipes shahii
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0009206
Biosample ID	SAMN20031235
Length	46,344 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	75
CDS Density	89.14%
tRNA Count	3
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0009206_1	K04763	103.7	2.5e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0009206_1	phrog_1	115.0	9.7e-34	integrase	integration and excision
UniRef90	UHGV-0009206_1	UniRef90_R7JKN8	502.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0009206_1	679935.Alfi_0474	471.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-0009206_1	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-0009206_1	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0009206_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0009206_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0009206_1	PF17293,PF13102,PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009206_4	PF10628	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009206_9	UniRef90_A0A8D9UI10	79.0	4.68e-17	Chromosomal replication initiator protein	N/A
eggNOG-mapper	UHGV-0009206_9	445970.ALIPUT_01633	97.4	4.43e-25	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-0009206_9	PF08299,NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_10	phrog_15610	115.7	1.6e-34	protease	other
UniRef90	UHGV-0009206_10	UniRef90_A0A0J6CFE9	127.0	4.29e-36	Membrane protein	N/A
eggNOG-mapper	UHGV-0009206_10	1347393.HG726024_gene2889	128.0	2.52e-37	N/A	N/A
PHROG	UHGV-0009206_11	phrog_14010	90.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0009206_11	1033732.CAHI01000035_gene2726	374.0	0	N/A	N/A
Pfam	UHGV-0009206_11	PF20186	N/A	N/A	N/A	DUF6549
structural_annotation	UHGV-0009206_11	PF20186	N/A	N/A	N/A	N/A
KOfam	UHGV-0009206_12	K00571	183.1	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0009206_12	phrog_67	168.3	0	DNA methyltransferase	other
UniRef90	UHGV-0009206_12	UniRef90_A0A5M5M510	440.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0009206_12	865938.Weevi_0267	321.0	0	DNA methylase	N/A
PADLOC	UHGV-0009206_12	MTase_II_00157	91.6	9.19952e-42	Type II methyltransferase	RM
Pfam	UHGV-0009206_12	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0009206_12	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0009206_12	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_13	phrog_873	123.8	1.2e-36	endolysin	head and packaging
UniRef90	UHGV-0009206_13	UniRef90_UPI0018ABA41D	259.0	0	structural protein P5	N/A
eggNOG-mapper	UHGV-0009206_13	411477.PARMER_01682	182.0	0	N/A	N/A
PHROG	UHGV-0009206_14	phrog_32423	43.0	0.0000000000042	N/A	unknown function
structural_annotation	UHGV-0009206_15	PF10043,NF008028	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009206_17	UniRef90_A0A5B3GAI3	326.0	0	LamG domain-containing protein	N/A
Pfam	UHGV-0009206_17	PF13385	N/A	N/A	Concanavalin A-like lectin/glucanases superfamily	Laminin_G_3
structural_annotation	UHGV-0009206_17	PF13385	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_18	phrog_20680	70.1	2.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0009206_18	470145.BACCOP_01126	80.9	3.89e-16	N/A	N/A
PHROG	UHGV-0009206_21	phrog_21217	85.0	8.3e-25	N/A	unknown function
PHROG	UHGV-0009206_22	phrog_14295	228.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0009206_22	445970.ALIPUT_01650	252.0	0	N/A	N/A
COG	UHGV-0009206_22	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0009206_23	phrog_33698	105.6	0	N/A	unknown function
UniRef90	UHGV-0009206_23	UniRef90_UPI001873A18B	562.0	0	BACON domain-containing protein	N/A
eggNOG-mapper	UHGV-0009206_23	742767.HMPREF9456_03372	181.0	0	N/A	N/A
structural_annotation	UHGV-0009206_23	NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009206_24	PF19266,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009206_26	PF05561	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_30	phrog_10	82.3	6.6e-24	major head protein	head and packaging
UniRef90	UHGV-0009206_30	UniRef90_A0A1V5ID18	203.0	0	Phage capsid family protein	N/A
structural_annotation	UHGV-0009206_30	PF05065,PF15188,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0009206_31	K06904	119.5	3.6e-35	N/A	N/A
PHROG	UHGV-0009206_31	phrog_80	115.7	5.4e-34	head maturation protease	head and packaging
UniRef90	UHGV-0009206_31	UniRef90_UPI000B385EC9	238.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0009206_31	449673.BACSTE_00581	140.0	2.39e-38	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0009206_31	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0009206_31	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0009206_31	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0009206_31	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_32	phrog_12	51.1	0.000000000000009	portal protein	head and packaging
UniRef90	UHGV-0009206_32	UniRef90_UPI001A90B2FB	86.7	0.00000000000000894	phage portal protein	N/A
eggNOG-mapper	UHGV-0009206_32	449673.BACSTE_00582	89.4	1.77e-16	Phage portal protein	N/A
Pfam	UHGV-0009206_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0009206_32	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0009206_33	K06909	179.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0009206_33	phrog_2	75.9	8e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0009206_33	UniRef90_A0A497PCX3	243.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0009206_33	313596.RB2501_01375	199.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0009206_33	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0009206_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0009206_33	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_34	phrog_606	77.0	2.3e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0009206_34	UniRef90_A0A6J7X176	84.7	6.81e-18	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0009206_34	266835.14021430	69.3	0.00000000000134	DNA-packaging protein gp3	N/A
Pfam	UHGV-0009206_34	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0009206_34	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009206_37	UniRef90_A0A396MBG1	145.0	8.12753e-44	N/A	N/A
eggNOG-mapper	UHGV-0009206_37	445970.ALIPUT_01584	145.0	1.4013e-44	N/A	N/A
Pfam	UHGV-0009206_37	PF16476	N/A	N/A	N/A	DUF5053
structural_annotation	UHGV-0009206_37	PF16476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009206_38	UniRef90_F0R799	52.4	0.0000000656	Type III restriction protein res subunit	N/A
eggNOG-mapper	UHGV-0009206_38	667015.Bacsa_2379	52.4	0.000000011	SPTR ArsR-family transcription regulator	N/A
PHROG	UHGV-0009206_39	phrog_4002	79.1	4.4e-23	N/A	unknown function
UniRef90	UHGV-0009206_39	UniRef90_UPI00189C26A3	152.0	6.5861e-43	N/A	N/A
eggNOG-mapper	UHGV-0009206_39	1492737.FEM08_28720	54.3	0.00000175	N/A	N/A
Pfam	UHGV-0009206_39	PF14730	N/A	N/A	N/A	DUF4468
structural_annotation	UHGV-0009206_39	PF14730,TIGR03931	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009206_40	UniRef90_A0A644VI62	52.0	0.0000074	HTH cro/C1-type domain-containing protein	N/A
COG	UHGV-0009206_40	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0009206_40	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0009206_43	K07684	51.8	0.000000000000016	narL; two-component system, NarL family, nitrate/nitrite response regulator NarL	N/A
UniRef90	UHGV-0009206_43	UniRef90_A0A5B5VJJ0	198.0	0	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0009206_43	1116472.MGMO_177c00100	51.6	0.00000305	helix_turn_helix, Lux Regulon	N/A
Pfam	UHGV-0009206_43	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0009206_43	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0009206_43	PF00196,MF_00674,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_44	phrog_4973	40.8	0.000000000031	N/A	unknown function
Pfam	UHGV-0009206_44	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0009206_44	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_47	phrog_56	61.2	5.5e-29	DNA methyltransferase	other
UniRef90	UHGV-0009206_47	UniRef90_UPI00164C574E	227.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0009206_47	1688.BCUN_0619	134.0	1.43e-33	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0009206_47	MTase_II_00075	76.1	1.1e-30	Type II methyltransferase	RM
Pfam	UHGV-0009206_47	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0009206_47	PF02086,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_48	phrog_2340	47.6	0.00000000000031	endonuclease	DNA, RNA and nucleotide metabolism
COG	UHGV-0009206_48	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0009206_48	PF18275	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_54	phrog_155	154.2	1.4013e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009206_54	UniRef90_UPI001CF85C41	194.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0009206_54	762982.HMPREF9442_00551	180.0	0	Erf family	N/A
Pfam	UHGV-0009206_54	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0009206_54	PF04404,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009206_56	1121100.JCM6294_521	63.9	0.00000000000472	N/A	N/A
PHROG	UHGV-0009206_57	phrog_72	53.8	0.0000000000000036	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0009206_57	1122991.BAIZ01000025_gene1850	134.0	2.26e-38	N/A	N/A
structural_annotation	UHGV-0009206_57	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_58	phrog_1408	88.6	7.6e-26	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0009206_58	1123248.KB893315_gene2930	111.0	2.85e-27	N/A	N/A
COG	UHGV-0009206_58	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0009206_58	PF10771,NF000244	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_60	phrog_824	113.7	1.1e-33	N/A	unknown function
UniRef90	UHGV-0009206_60	UniRef90_A0A373ZU69	202.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0009206_60	357276.EL88_12700	130.0	1.39e-37	VRR_NUC	N/A
Pfam	UHGV-0009206_60	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0009206_60	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-0009206_61	K15352	142.5	1.19951e-42	pipB2; secreted effector protein PipB2	N/A
PHROG	UHGV-0009206_61	phrog_31265	105.4	0	N/A	unknown function
UniRef90	UHGV-0009206_61	UniRef90_A0A5B5VMT7	207.0	0	Pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-0009206_61	1226322.HMPREF1545_00011	117.0	2.49e-29	Pentapeptide repeats (8 copies)	N/A
Pfam	UHGV-0009206_61	PF13599	N/A	N/A	Pentapeptide repeats (9 copies)	Pentapeptide_4
Pfam	UHGV-0009206_61	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0009206_61	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0009206_61	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009206_61	PF19062,PF13599,NF011743,COG1357	N/A	N/A	N/A	N/A
KOfam	UHGV-0009206_62	K00558	183.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0009206_62	phrog_363	236.0	0	DNA methyltransferase	other
UniRef90	UHGV-0009206_62	UniRef90_UPI0018AB7658	644.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0009206_62	445970.ALIPUT_01612	484.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0009206_62	MTase_II_00058	154.7	0	Type II methyltransferase	RM
Pfam	UHGV-0009206_62	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0009206_62	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0009206_62	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0009206_62	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0009206_68	phrog_874	86.5	3.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0009206_68	762968.HMPREF9441_00541	213.0	0	N/A	N/A
structural_annotation	UHGV-0009206_68	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
Pfam	UHGV-0009206_72	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
COG	UHGV-0009206_72	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
UniRef90	UHGV-0009206_75	UniRef90_UPI000B5C1847	52.4	0.00000323	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0009206_75	483216.BACEGG_03179	53.9	0.000000131	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0009206	Yes	46,344	50	100	1
UHGV-0974021	No	45,222	50	99	1
UHGV-0917201	No	45,143	50	99	1
UHGV-0926722	No	45,057	50	98	1
UHGV-0211411	No	37,928	50	83	1
UHGV-1122289	No	35,880	50	78	1
UHGV-1484088	No	27,874	50	61	1
UHGV-1446844	No	26,988	50	59	1
UHGV-1468235	No	23,753	50	52	1
UHGV-0118012	No	18,486	49	42	1
UHGV-1198681	No	15,564	50	34	1
UHGV-2143379	No	15,320	49	34	1
UHGV-1775016	No	15,303	50	33	1
UHGV-0096372	No	15,151	51	33	1
UHGV-1775602	No	15,150	50	33	1
UHGV-1688043	No	14,646	50	32	1
UHGV-1701121	No	14,613	51	32	1
UHGV-1221549	No	11,911	51	26	1
UHGV-2169884	No	11,176	51	24	1