Viral OTU vOTU-009877

vOTU: vOTU-009877

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-009877
Number of Genomes	7
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00146 → vGENUS-00309 → vSUBGEN-30212 → vOTU-009877
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1402560
Biosample ID	SAMN00088586
Length	37,326 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	54
CDS Density	91.87%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1402560_1	phrog_5110	98.6	3.6e-29	terminase small subunit	head and packaging
UniRef90	UHGV-1402560_1	UniRef90_A0A1C5LZF0	102.0	6.54e-26	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1402560_1	349161.Dred_2608	79.0	9.44e-18	N/A	N/A
Pfam	UHGV-1402560_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1402560_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_2	phrog_9	263.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1402560_2	UniRef90_D4M588	1101.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-1402560_2	1232452.BAIB02000007_gene1629	528.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1402560_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1402560_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1402560_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1402560_2	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_3	phrog_12	69.1	3.1e-20	portal protein	head and packaging
UniRef90	UHGV-1402560_3	UniRef90_UPI00156D5DC9	593.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1402560_3	1232452.BAIB02000007_gene1627	281.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1402560_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1402560_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1402560_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_4	K01358	154.7	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1402560_4	phrog_94	228.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1402560_4	UniRef90_UPI00156EEE56	369.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1402560_4	1232452.BAIB02000007_gene1626	265.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1402560_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1402560_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1402560_4	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_5	phrog_10	92.1	5.5e-27	major head protein	head and packaging
UniRef90	UHGV-1402560_5	UniRef90_D4M591	707.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-1402560_5	1232452.BAIB02000007_gene1625	481.0	0	Phage capsid family	N/A
Pfam	UHGV-1402560_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1402560_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1402560_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1402560_5	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402560_7	UniRef90_D4M593	235.0	0	Phage head-tail adaptor, putative, SPP1 family	N/A
NCBIFam	UHGV-1402560_7	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-1402560_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1402560_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_9	phrog_5	48.2	0.00000000000024	tail completion or Neck1 protein	connector
UniRef90	UHGV-1402560_9	UniRef90_D4M595	231.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-1402560_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1402560_9	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_10	phrog_88	98.4	7.2e-29	major tail protein	tail
UniRef90	UHGV-1402560_10	UniRef90_D4M596	381.0	0	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-1402560_10	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1402560_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1402560_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_13	phrog_1272	210.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1402560_13	UniRef90_A0A373N7M8	1125.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1402560_13	1035184.HMPREF1042_1328	307.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-1402560_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1402560_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1402560_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1402560_14	phrog_33	67.2	3.8e-19	distal tail protein Dit	tail
UniRef90	UHGV-1402560_14	UniRef90_UPI000E50043B	359.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1402560_14	1235798.C817_04593	207.0	0	phage tail	N/A
COG	UHGV-1402560_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1402560_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_15	phrog_13289	396.4	0	tail protein	tail
UniRef90	UHGV-1402560_15	UniRef90_A0A373N6D1	1189.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1402560_15	1235798.C817_02568	478.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1402560_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1402560_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1402560_15	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-1402560_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_16	phrog_14030	136.0	1.7e-40	N/A	unknown function
UniRef90	UHGV-1402560_16	UniRef90_A0A373N7H3	660.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-1402560_16	33035.JPJF01000093_gene2240	327.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1402560_16	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1402560_16	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-1402560_16	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1402560_16	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_17	K07296	41.4	0.000000000015	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-1402560_17	phrog_10972	46.9	0.00000000000032	tail fiber protein	tail
UniRef90	UHGV-1402560_17	UniRef90_A0A374E9Q0	401.0	0	Collagen-like protein	N/A
Pfam	UHGV-1402560_17	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1402560_17	PF10651,NF007636,COG5456	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_19	K06236	43.7	0.0000000000014	COL1A; collagen type I alpha	N/A
PHROG	UHGV-1402560_19	phrog_819	60.3	2.1e-17	tail protein	tail
UniRef90	UHGV-1402560_19	UniRef90_UPI0006C3C855	325.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1402560_19	877414.ATWA01000019_gene2051	84.3	0.00000000000000226	N/A	N/A
Pfam	UHGV-1402560_19	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-1402560_20	K03733	214.9	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-1402560_20	phrog_1	171.6	0	integrase	integration and excision
UniRef90	UHGV-1402560_20	UniRef90_A0A844KCF3	636.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1402560_20	742765.HMPREF9457_03372	463.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1402560_20	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-1402560_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1402560_20	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1402560_20	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1402560_21	PF17900	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402560_22	UniRef90_A0A373CM53	157.0	5.32493e-44	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-1402560_22	1235799.C818_04237	301.0	0	N/A	N/A
structural_annotation	UHGV-1402560_22	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_23	phrog_20274	146.9	7.84727e-44	N/A	unknown function
UniRef90	UHGV-1402560_23	UniRef90_A0A173TUK0	196.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-1402560_23	608534.GCWU000341_02273	158.0	0	N/A	N/A
Pfam	UHGV-1402560_23	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-1402560_23	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1402560_23	PF06541,COG4905	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_24	phrog_1863	59.3	3.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1402560_24	1226322.HMPREF1545_04027	64.7	0.00000000000104	N/A	N/A
PHROG	UHGV-1402560_25	phrog_18218	136.3	8.30003e-41	N/A	unknown function
UniRef90	UHGV-1402560_25	UniRef90_A0A373SUI3	191.0	0	Ribonuclease	N/A
eggNOG-mapper	UHGV-1402560_25	658655.HMPREF0988_02546	155.0	0	N/A	N/A
structural_annotation	UHGV-1402560_25	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1402560_26	PF13384,NF001074,COG3677	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_27	K07273	183.6	0	acm; lysozyme	N/A
PHROG	UHGV-1402560_27	phrog_291	138.9	4.10006e-41	endolysin	lysis
UniRef90	UHGV-1402560_27	UniRef90_A0A564SYY2	697.0	0	Glycosyl hydrolases family 25	N/A
eggNOG-mapper	UHGV-1402560_27	515620.EUBELI_01316	198.0	0	Glycoside Hydrolase Family 25-like lysozyme endolysin	N/A
Pfam	UHGV-1402560_27	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1402560_27	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1402560_27	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1402560_28	cluster_11486	65.9	1.47e-16	NA	N/A
KOfam	UHGV-1402560_29	K19117	94.9	8.4e-28	csd1, cas8c; CRISPR-associated protein Csd1	N/A
UniRef90	UHGV-1402560_29	UniRef90_UPI001570630B	264.0	0	type I-C CRISPR-associated protein Cas8c/Csd1	N/A
eggNOG-mapper	UHGV-1402560_29	679201.HMPREF9334_02143	88.2	8.51e-17	CRISPR-associated protein, Csd1 family	N/A
PADLOC	UHGV-1402560_29	cd09757	111.1	1.7e-32	CAS-I-C; effector_LS	CRISPR-CAS
Pfam	UHGV-1402560_29	PF09709	N/A	N/A	CRISPR-associated protein (Cas_Csd1)	Cas_Csd1
COG	UHGV-1402560_29	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1402560_29	PF09709,TIGR01863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402560_30	UniRef90_R6NQM1	67.0	0.000000000615	Putative TnpX site-specific recombinase	N/A
eggNOG-mapper	UHGV-1402560_30	478749.BRYFOR_07651	182.0	0	N/A	N/A
structural_annotation	UHGV-1402560_30	TIGR03826	N/A	N/A	N/A	N/A
UniRef90	UHGV-1402560_31	UniRef90_A0A374IGY5	126.0	9.03e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1402560_31	1235799.C818_04243	81.3	1.19e-19	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1402560_31	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1402560_31	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_32	K06400	247.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1402560_32	phrog_95	260.5	0	integrase	integration and excision
UniRef90	UHGV-1402560_32	UniRef90_A0A374E9M4	1018.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1402560_32	97139.C824_00068	709.0	0	Recombinase	N/A
Pfam	UHGV-1402560_32	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1402560_32	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1402560_32	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1402560_32	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_33	phrog_38135	63.7	2.7e-18	N/A	unknown function
UniRef90	UHGV-1402560_33	UniRef90_UPI001F3985DB	676.0	0	N/A	N/A
eggNOG-mapper	UHGV-1402560_33	658088.HMPREF0987_00537	79.3	0.000000000000126	DNA/RNA non-specific endonuclease	N/A
Pfam	UHGV-1402560_33	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-1402560_33	PF14020,PF21602	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_35	K18830	69.4	5.8e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1402560_35	phrog_2967	52.9	0.000000000000006	transcriptional regulator	transcription regulation
UniRef90	UHGV-1402560_35	UniRef90_D4M569	236.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-1402560_35	1280698.AUJS01000007_gene1002	127.0	8.59e-36	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1402560_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1402560_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1402560_35	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1402560_37	COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_40	phrog_3584	152.0	2.8026e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1402560_40	665950.HMPREF1025_02552	313.0	0	N/A	N/A
structural_annotation	UHGV-1402560_40	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_41	K03469	50.9	0.00000000000003	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1402560_41	phrog_531	61.1	2e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1402560_41	UniRef90_A0A844KCI1	294.0	0	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-1402560_41	665950.HMPREF1025_02551	152.0	1.4013e-45	RNase H	N/A
Pfam	UHGV-1402560_41	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1402560_41	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1402560_41	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1402560_42	1235792.C808_00065	244.0	0	N/A	N/A
PHROG	UHGV-1402560_43	phrog_8470	396.0	0	N/A	unknown function
UniRef90	UHGV-1402560_43	UniRef90_UPI001D086F83	950.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1402560_43	97139.C824_00039	1129.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1402560_43	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1402560_43	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1402560_44	phrog_15077	108.6	1e-31	N/A	unknown function
UniRef90	UHGV-1402560_44	UniRef90_UPI001D0741A0	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-1402560_44	97139.C824_05986	327.0	0	N/A	N/A
structural_annotation	UHGV-1402560_44	PF11300,NF033725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1402560_46	1196322.A370_05726	65.5	0.000000000000825	N/A	N/A
PHROG	UHGV-1402560_47	phrog_7566	113.7	6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1402560_47	665950.HMPREF1025_02547	177.0	0	N/A	N/A
PHROG	UHGV-1402560_53	phrog_36	83.5	2.5e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1402560_53	UniRef90_UPI001899709D	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-1402560_53	658655.HMPREF0988_02569	212.0	0	sigma factor activity	N/A
Pfam	UHGV-1402560_53	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1402560_53	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1402560_53	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1402560_54	K07451	51.8	0.000000000000014	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1402560_54	phrog_119	79.1	5.3e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1402560_54	UniRef90_A0A373MPW5	223.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1402560_54	1232452.BAIB02000007_gene1631	97.1	1.08e-24	HNH nucleases	N/A
Pfam	UHGV-1402560_54	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1402560_54	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1402560	Yes	37,326	42	100	1
UHGV-1922429	No	37,352	42	100	1
UHGV-1405183	No	37,333	42	100	1
UHGV-1384052	No	36,225	43	98	1
UHGV-1729898	No	15,448	43	43	1
UHGV-1808627	No	13,062	44	37	1
UHGV-0070424	No	12,673	42	36	1