Viral OTU vOTU-010795

vOTU: vOTU-010795

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-010795
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00135 → vSUBFAM-04616 → vGENUS-08225 → vSUBGEN-07701 → vOTU-010795
Host Lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0038580
Biosample ID	SAMEA4969121
Length	48,028 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	79
CDS Density	89.67%
tRNA Count	4
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0038580_1	K14059	221.1	0	int; integrase	N/A
PHROG	UHGV-0038580_1	phrog_1	200.7	0	integrase	integration and excision
UniRef90	UHGV-0038580_1	UniRef90_R5LPI4	328.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0038580_1	1232449.BAHV02000018_gene1556	194.0	0	Site-specific recombinase, phage integrase family	N/A
Pfam	UHGV-0038580_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0038580_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0038580_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0038580_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0038580_2	K07729	75.5	9.1e-22	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0038580_2	phrog_8	64.0	3.1e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0038580_2	UniRef90_A0A4R6BWA4	80.9	2.49e-17	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0038580_2	883112.HMPREF9707_00008	77.4	0.00000000000000111	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0038580_2	retron_type_VI_hth_cluster2_1	48.2	0.00000000000024	N/A	Retron
Pfam	UHGV-0038580_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0038580_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0038580_2	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038580_3	UniRef90_A0A0R2J4H9	69.3	0.0000000000000445	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0038580_3	1234679.BN424_3330	65.5	0.000000000000248	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0038580_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0038580_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0038580_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0038580_4	cluster_116087	46.6	0.000000000538	NA	N/A
PHROG	UHGV-0038580_5	phrog_428	128.9	5.4e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038580_5	UniRef90_UPI000B1808B0	109.0	3.04e-25	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0038580_5	190478.Q8SBM0_9CAUD	109.0	4.78e-26	calcium ion binding	N/A
Pfam	UHGV-0038580_5	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0038580_5	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0038580_5	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
KOfam	UHGV-0038580_6	K17680	137.3	1.4013e-45	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0038580_6	phrog_19	175.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038580_6	UniRef90_UPI00129D8126	412.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0038580_6	1298920.KI911353_gene2713	385.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0038580_6	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0038580_6	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0038580_6	PF03796,PF16793,MF_01498,MF_00700,NF004109,NF040562,COG0305,COG1467	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_8	PF02559,MF_01194,TIGR02097	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_9	phrog_6244	41.7	0.000000000026	N/A	unknown function
structural_annotation	UHGV-0038580_9	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_10	phrog_2872	250.8	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038580_10	UniRef90_A0A412AWF4	197.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0038580_10	1449050.JNLE01000005_gene3946	211.0	0	AAA domain	N/A
Pfam	UHGV-0038580_10	PF13479	N/A	N/A	AAA domain	AAA_24
KOfam	UHGV-0038580_12	K17080	176.1	0	PHB1; prohibitin 1	N/A
PHROG	UHGV-0038580_12	phrog_200	142.7	2.59941e-42	lipoprotein	other
UniRef90	UHGV-0038580_12	UniRef90_R6BHX9	218.0	0	PHB domain-containing protein	N/A
eggNOG-mapper	UHGV-0038580_12	1131462.DCF50_p817	148.0	1.2e-40	PFAM SPFH domain Band 7 family	N/A
Pfam	UHGV-0038580_12	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0038580_12	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-0038580_12	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_14	phrog_18107	105.7	4.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0038580_14	536233.CLO_1545	99.0	2.96e-23	N/A	N/A
structural_annotation	UHGV-0038580_14	PF05037	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_15	PF10654	N/A	N/A	N/A	N/A
KOfam	UHGV-0038580_29	K07313	137.4	9.99995e-41	pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]	N/A
PHROG	UHGV-0038580_29	phrog_246	121.2	7.1e-36	NinI-like serine-threonine phosphatase	other
UniRef90	UHGV-0038580_29	UniRef90_A0A843HKZ7	310.0	0	Metallophosphoesterase (Fragment)	N/A
eggNOG-mapper	UHGV-0038580_29	1033810.HLPCO_002194	152.0	1.71939e-42	Calcineurin-like phosphoesterase	N/A
Pfam	UHGV-0038580_29	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0038580_29	COG0639	N/A	N/A	Diadenosine tetraphosphatase ApaH/serine/threonine protein phosphatase, PP2A family	N/A
structural_annotation	UHGV-0038580_29	PF12850,MF_01443,NF007425,COG2129	N/A	N/A	N/A	N/A
Pfam	UHGV-0038580_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0038580_31	PF01381,NF040522,NF007271,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_34	phrog_2245	71.6	1.2e-20	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0038580_35	UniRef90_A0A316P783	66.6	0.000000000000487	XRE family transcriptional regulator	N/A
Pfam	UHGV-0038580_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0038580_35	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0038580_37	K01160	52.5	0.000000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0038580_37	phrog_34	51.8	0.000000000000017	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038580_37	UniRef90_UPI0018F5FF03	145.0	1.8399e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0038580_37	796940.HMPREF9628_00163	130.0	1.35e-37	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0038580_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0038580_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0038580_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_39	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0038580_42	K14060	93.1	3.8e-27	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0038580_42	phrog_125	134.2	8.60001e-40	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038580_42	UniRef90_A8RCY2	135.0	4.42e-36	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0038580_42	428127.EUBDOL_01535	135.0	7.41e-37	resolvase	N/A
Pfam	UHGV-0038580_42	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0038580_42	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0038580_42	PF00239,NF009949,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0038580_50	K03111	42.2	0.000000000017	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0038580_50	phrog_44	41.8	0.000000000014	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0038580_50	UniRef90_U4KKW9	77.8	1.82e-16	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0038580_50	562981.HMPREF0428_01047	69.7	0.0000000000000563	Single-strand binding protein family	N/A
Pfam	UHGV-0038580_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0038580_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0038580_50	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038580_52	1163671.JAGI01000002_gene1246	87.4	9.9e-20	N/A	N/A
structural_annotation	UHGV-0038580_53	PF05732,MF_01177,TIGR01610,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_55	phrog_3502	48.1	0.00000000000023	N/A	unknown function
UniRef90	UHGV-0038580_55	UniRef90_A0A1M5VMA1	53.5	0.000000247	Repressor LexA	N/A
eggNOG-mapper	UHGV-0038580_55	945713.IALB_0493	50.1	0.00000784	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0038580_55	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-0038580_55	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0038580_56	PF01381	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038580_57	1410626.JHXB01000008_gene1183	58.5	0.0000000119	N/A	N/A
PHROG	UHGV-0038580_59	phrog_38	202.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0038580_59	UniRef90_A0A416VUC6	158.0	1.19e-38	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0038580_59	428127.EUBDOL_01551	250.0	0	chromosome segregation	N/A
NCBIFam	UHGV-0038580_59	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0038580_59	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_59	PF17289,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_60	phrog_64	193.9	0	portal protein	head and packaging
UniRef90	UHGV-0038580_60	UniRef90_UPI001D06C00B	310.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0038580_60	428127.EUBDOL_01552	260.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0038580_60	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0038580_60	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_62	phrog_247	321.5	0	major head protein	head and packaging
UniRef90	UHGV-0038580_62	UniRef90_UPI000C089D46	422.0	0	phage coat protein	N/A
eggNOG-mapper	UHGV-0038580_62	445335.CBN_1379	405.0	0	N/A	N/A
COG	UHGV-0038580_62	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0038580_62	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0038580_63	UniRef90_A0A374HKI7	58.2	0.0000000117	DNA-packaging protein	N/A
structural_annotation	UHGV-0038580_63	PF05135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_64	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_66	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0038580_67	PF08873,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_68	phrog_158	44.8	0.0000000000022	major tail protein	tail
eggNOG-mapper	UHGV-0038580_68	1293597.BN147_01430	59.3	0.00000000432	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0038580_68	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-0038580_69	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0038580_69	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0038580_70	1211844.CBLM010000023_gene987	54.3	0.0000000388	N/A	N/A
PHROG	UHGV-0038580_71	phrog_28918	111.0	1.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-0038580_71	428127.EUBDOL_01563	186.0	8.40779e-45	homoserine transmembrane transporter activity	N/A
COG	UHGV-0038580_71	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0038580_71	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_73	phrog_6616	79.1	4e-23	tail protein	tail
eggNOG-mapper	UHGV-0038580_73	1121333.JMLH01000047_gene1007	105.0	1.74e-20	N/A	N/A
structural_annotation	UHGV-0038580_73	PF16466,TIGR03361,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0038580_74	phrog_372	191.7	0	tail protein	tail
UniRef90	UHGV-0038580_74	UniRef90_UPI001D088452	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0038580_74	1507.HMPREF0262_00218	91.3	1.99e-16	tail collar domain protein	N/A
COG	UHGV-0038580_74	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0038580_74	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
KOfam	UHGV-0038580_77	K10268	48.1	2.4e-35	FBXL2_20; F-box and leucine-rich repeat protein 2/20	N/A
PHROG	UHGV-0038580_77	phrog_9915	45.4	3.6e-33	N/A	unknown function
Pfam	UHGV-0038580_77	PF03382	N/A	N/A	N/A	DUF285
Pfam	UHGV-0038580_77	PF13855	N/A	N/A	Leucine rich repeat	LRR_8
Pfam	UHGV-0038580_77	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-0038580_77	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-0038580_77	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
KOfam	UHGV-0038580_79	K07273	175.9	0	acm; lysozyme	N/A
PHROG	UHGV-0038580_79	phrog_291	137.7	9.99995e-41	endolysin	lysis
UniRef90	UHGV-0038580_79	UniRef90_UPI000C08B3CE	206.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0038580_79	398512.JQKC01000068_gene4270	204.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0038580_79	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0038580_79	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0038580_79	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0038580_79	COG0810	N/A	N/A	Periplasmic protein TonB, links inner and outer membranes	N/A
structural_annotation	UHGV-0038580_79	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0038580	Yes	48,028	28	100	1
UHGV-0015878	No	48,854	28	100	1