Viral OTU vOTU-011056

vOTU: vOTU-011056

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-011056
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00067 → vGENUS-19593 → vSUBGEN-38035 → vOTU-011056
Host Lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0075881
Biosample ID	N/A
Length	37,636 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	66
CDS Density	91.22%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0075881_1	K14059	70.2	4.6e-20	int; integrase	N/A
PHROG	UHGV-0075881_1	phrog_1	104.2	1.7e-30	integrase	integration and excision
UniRef90	UHGV-0075881_1	UniRef90_A0A1Q6L7V2	515.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0075881_1	697329.Rumal_2496	156.0	4.71004e-41	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0075881_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0075881_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0075881_1	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_2	phrog_87	75.5	5.8e-22	metallo-protease	other
UniRef90	UHGV-0075881_2	UniRef90_R5PN39	99.0	5.95e-24	N/A	N/A
eggNOG-mapper	UHGV-0075881_2	1220589.CD32_16955	64.3	0.0000000000545	Zn peptidase	N/A
Pfam	UHGV-0075881_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0075881_2	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0075881_2	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_3	K22299	44.1	0.0000000000045	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0075881_3	phrog_8	48.6	0.0000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0075881_3	UniRef90_A0A8E5Y4B1	57.0	0.0000000417	Helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0075881_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0075881_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0075881_3	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075881_4	UniRef90_UPI00189D0CCD	69.3	0.000000000000029	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-0075881_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_5	phrog_6058	42.7	0.0000000000083	N/A	unknown function
structural_annotation	UHGV-0075881_5	PF12728,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_10	phrog_253	110.0	2.2e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075881_10	UniRef90_UPI00054290C3	108.0	8.16e-27	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0075881_10	632292.Calhy_0748	83.2	6.37e-18	Siphovirus Gp157	N/A
Pfam	UHGV-0075881_10	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0075881_10	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_11	phrog_124	89.1	6.5e-26	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075881_11	UniRef90_A0A7X7HFU7	301.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0075881_11	1329516.JPST01000033_gene2854	74.3	0.000000000000867	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-0075881_11	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0075881_11	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0075881_11	PF13479,MF_00348,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075881_12	UniRef90_UPI001F3F3E5C	99.8	3.65e-23	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0075881_12	445972.ANACOL_01825	80.9	1.25e-16	N/A	N/A
structural_annotation	UHGV-0075881_12	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_13	phrog_7370	40.5	0.000000000033	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075881_13	UniRef90_R7IWH8	109.0	1.06e-29	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0075881_13	445972.ANACOL_01826	53.1	0.0000000318	HNH nucleases	N/A
Pfam	UHGV-0075881_13	PF01844	N/A	N/A	HNH endonuclease	HNH
UniRef90	UHGV-0075881_14	UniRef90_G3MAW6	50.1	0.00000268	Gp586	N/A
KOfam	UHGV-0075881_15	K02086	52.9	0.0000000000000031	dnaD; DNA replication protein	N/A
PHROG	UHGV-0075881_15	phrog_186	102.9	4.1e-30	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0075881_15	1567011.A0A0A7S128_9VIRU	73.9	0.00000000000124	calcium ion binding	N/A
Pfam	UHGV-0075881_15	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0075881_15	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0075881_15	PF07120,COG3756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_16	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_17	phrog_1123	56.5	4.6e-16	N/A	unknown function
UniRef90	UHGV-0075881_17	UniRef90_A0A7U3NJT7	68.9	0.000000000000867	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0075881_17	445972.ANACOL_03346	66.6	0.000000000000586	N/A	N/A
structural_annotation	UHGV-0075881_17	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_19	K01160	46.7	0.00000000000089	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0075881_19	phrog_1682	83.7	3e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075881_19	UniRef90_R7FGZ0	241.0	0	Gp63	N/A
eggNOG-mapper	UHGV-0075881_19	1120985.AUMI01000019_gene2247	105.0	9.59e-28	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0075881_19	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0075881_19	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_20	K00571	68.3	1.5e-19	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0075881_20	phrog_67	63.7	1.5e-18	DNA methyltransferase	other
UniRef90	UHGV-0075881_20	UniRef90_UPI001BA5F7AD	354.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0075881_20	1123298.KB904077_gene447	325.0	0	DNA modification methylase DNA replication, recombination, and repair	N/A
PADLOC	UHGV-0075881_20	MTase_II_00157	60.9	1.7e-17	Type II methyltransferase	RM
Pfam	UHGV-0075881_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0075881_20	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0075881_20	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_30	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_34	K07474	87.5	3.8e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0075881_34	phrog_51	111.5	7.3e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0075881_34	UniRef90_R6HDV5	248.0	0	Prophage LambdaCh01 terminase small subunit	N/A
eggNOG-mapper	UHGV-0075881_34	246194.CHY_1681	138.0	5.35e-40	terminase, small subunit	N/A
Pfam	UHGV-0075881_34	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0075881_34	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0075881_34	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_35	K06909	163.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0075881_35	phrog_3717	142.0	3.99931e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0075881_35	UniRef90_R6H5U4	337.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0075881_35	861454.HMPREF9099_00528	235.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0075881_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0075881_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0075881_35	PF04466,MF_04145,NF002340,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_36	K06909	223.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0075881_36	phrog_5653	200.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0075881_36	UniRef90_R6HF73	464.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0075881_36	1408823.AXUS01000024_gene2712	354.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0075881_36	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0075881_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0075881_36	PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_37	phrog_64	204.1	0	portal protein	head and packaging
UniRef90	UHGV-0075881_37	UniRef90_R6I230	456.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0075881_37	665956.HMPREF1032_03614	268.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0075881_37	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0075881_37	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075881_39	UniRef90_R7IWF4	201.0	0	SPP1 gp7 family phage putative head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0075881_40	272626.lin1730	64.7	0.0000000153	Phage Mu protein F like protein	N/A
COG	UHGV-0075881_40	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_43	phrog_172	106.1	4.4e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0075881_43	UniRef90_A0A3D1PKZ2	304.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0075881_43	1235800.C819_00486	99.8	5.01e-23	N/A	N/A
Pfam	UHGV-0075881_43	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0075881_43	PF14265	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075881_44	UniRef90_A0A3D1PN29	671.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0075881_44	86416.Clopa_0341	106.0	2.17e-22	Phage capsid family	N/A
Pfam	UHGV-0075881_44	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
COG	UHGV-0075881_44	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0075881_44	PF05065,PF18316,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_45	PF05135,TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_46	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0075881_49	665956.HMPREF1032_03624	54.7	0.000000113	N/A	N/A
structural_annotation	UHGV-0075881_49	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0075881_50	445972.ANACOL_01851	96.3	3.1e-23	N/A	N/A
structural_annotation	UHGV-0075881_50	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_51	PF12363	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_53	TIGR04165,COG3478	N/A	N/A	N/A	N/A
UniRef90	UHGV-0075881_54	UniRef90_A0A7X9XQD0	68.2	0.000000000568	N/A	N/A
eggNOG-mapper	UHGV-0075881_54	1292035.H476_2311	57.8	0.000000422	Short C-terminal domain	N/A
Pfam	UHGV-0075881_54	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
PHROG	UHGV-0075881_56	phrog_1535	178.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0075881_56	UniRef90_R6H5W8	635.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0075881_56	86416.Clopa_0587	63.9	0.000000227	phage tail tape measure protein	N/A
COG	UHGV-0075881_56	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_57	phrog_1194	99.5	2.3e-29	N/A	unknown function
structural_annotation	UHGV-0075881_57	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_58	phrog_6616	89.5	3e-26	tail protein	tail
eggNOG-mapper	UHGV-0075881_58	1414720.CBYM010000002_gene560	84.3	0.000000000000122	Phage minor structural protein	N/A
COG	UHGV-0075881_58	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0075881_58	PF01105,PF04862,NF033848,TIGR04362	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_59	phrog_372	232.0	0	tail protein	tail
UniRef90	UHGV-0075881_59	UniRef90_UPI0019610394	149.0	9.25e-34	N/A	N/A
eggNOG-mapper	UHGV-0075881_59	1211844.CBLM010000016_gene1479	65.1	0.0000000574	N/A	N/A
Pfam	UHGV-0075881_59	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0075881_59	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0075881_60	PF07041	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0075881_61	397290.C810_03256	52.4	0.000000271	N/A	N/A
structural_annotation	UHGV-0075881_62	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-0075881_63	K01447	117.5	1.7e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0075881_63	phrog_9611	148.2	5.32493e-44	endolysin	lysis
UniRef90	UHGV-0075881_63	UniRef90_R6H5X6	475.0	0	N-acetylmuramyl-L-alanine amidase negative regulator of AmpC AmpD	N/A
eggNOG-mapper	UHGV-0075881_63	642492.Clole_0841	205.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0075881_63	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0075881_63	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0075881_63	PF01510,PF20780,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0075881_64	phrog_3377	138.3	4.49999e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0075881_64	UniRef90_UPI001D10AAAA	115.0	3.14e-29	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0075881_64	1434319.W5RV26_9CAUD	110.0	3.85e-27	N/A	N/A
UniRef90	UHGV-0075881_65	UniRef90_R6I264	118.0	1.27e-33	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0075881_65	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0075881_65	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0075881_65	PF01381,NF010465,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0075881	Yes	37,636	28	100	1
UHGV-0181728	No	42,950	28	100	1
UHGV-2039599	No	18,785	28	51	1