Viral OTU vOTU-011345

vOTU: vOTU-011345

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-011345
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00156 → vSUBFAM-01319 → vGENUS-02736 → vSUBGEN-10621 → vOTU-011345
Host Lineage	Bacteria → Spirochaetota → Spirochaetia → Treponematales → Treponemataceae → Treponema_D → Treponema_D sp900541995
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0193042
Biosample ID	N/A
Length	34,431 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	52
CDS Density	95.14%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0193042_3	UniRef90_UPI0011CAEDCA	181.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0193042_3	1125725.HMPREF1325_1302	169.0	0	N/A	N/A
structural_annotation	UHGV-0193042_3	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_6	phrog_2139	119.0	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193042_6	UniRef90_UPI0011CB479F	405.0	0	N/A	N/A
eggNOG-mapper	UHGV-0193042_6	545694.TREPR_0892	307.0	0	N/A	N/A
Pfam	UHGV-0193042_6	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-0193042_6	PF12705,MF_03030,TIGR04328,COG2251	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_7	phrog_15098	146.7	7.9874e-44	N/A	unknown function
UniRef90	UHGV-0193042_7	UniRef90_A8ATE5	126.0	2.08e-34	Gp52	N/A
KOfam	UHGV-0193042_8	K03111	111.0	1.7e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0193042_8	phrog_44	107.3	1.7e-31	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193042_8	UniRef90_M2AXR1	183.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0193042_8	1124982.MSI_22640	174.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0193042_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0193042_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0193042_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0193042_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0193042_8	PF00436,MF_00984,NF005406,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_9	phrog_21649	105.8	2.8e-31	N/A	unknown function
UniRef90	UHGV-0193042_9	UniRef90_A0A5E4IAL9	156.0	4.04975e-43	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0193042_9	357809.Cphy_2988	164.0	0	ERF superfamily	N/A
Pfam	UHGV-0193042_9	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0193042_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0193042_9	PF04404,TIGR00607	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_10	1539298.JO41_08365	173.0	0	N/A	N/A
structural_annotation	UHGV-0193042_10	PF16784	N/A	N/A	N/A	N/A
UniRef90	UHGV-0193042_11	UniRef90_A0A7W8LNA3	197.0	0	N/A	N/A
structural_annotation	UHGV-0193042_11	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_12	1125725.HMPREF1325_1313	143.0	1.86373e-43	N/A	N/A
PHROG	UHGV-0193042_13	phrog_15768	81.8	6.6e-30	N/A	unknown function
UniRef90	UHGV-0193042_13	UniRef90_A0A0E2E9N1	101.0	1.85e-23	N/A	N/A
eggNOG-mapper	UHGV-0193042_13	1232428.CAVO010000067_gene439	73.9	0.0000000000000191	N/A	N/A
Pfam	UHGV-0193042_13	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0193042_13	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0193042_14	K02315	155.2	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0193042_14	phrog_50	137.8	8.00001e-41	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193042_14	UniRef90_M2BFI9	223.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0193042_14	641147.HMPREF9021_02339	116.0	1.19e-28	IstB-like ATP binding protein	N/A
PADLOC	UHGV-0193042_14	DrmD_00013	41.7	0.000000000027	DrmD	DISARM
Pfam	UHGV-0193042_14	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0193042_14	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0193042_14	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_15	1539298.JO41_12705	85.5	1.1e-18	N/A	N/A
UniRef90	UHGV-0193042_16	UniRef90_A0A843HS63	75.1	0.00000000000000531	MazG domain-containing protein	N/A
Pfam	UHGV-0193042_16	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
PHROG	UHGV-0193042_18	phrog_5781	109.9	2.1e-32	N/A	unknown function
UniRef90	UHGV-0193042_18	UniRef90_UPI0003FCFFC2	94.0	3.69e-21	N/A	N/A
eggNOG-mapper	UHGV-0193042_18	742767.HMPREF9456_03346	90.1	1.61e-21	N/A	N/A
Pfam	UHGV-0193042_18	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0193042_18	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
PHROG	UHGV-0193042_19	phrog_799	185.8	0	DNA methyltransferase	other
UniRef90	UHGV-0193042_19	UniRef90_UPI001CC0BF33	217.0	0	NAD(P)-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-0193042_19	1123263.AUKY01000096_gene1823	214.0	0	DNA restriction-modification system	N/A
COG	UHGV-0193042_19	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-0193042_19	PF19587,MF_01872,NF011489,COG0286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0193042_21	PF12961,COG2028	N/A	N/A	N/A	N/A
KOfam	UHGV-0193042_22	K00571	134.7	8.20001e-40	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0193042_22	phrog_498	355.2	0	DNA methyltransferase	other
UniRef90	UHGV-0193042_22	UniRef90_U1FPG3	504.0	0	DNA methylase family protein	N/A
eggNOG-mapper	UHGV-0193042_22	1125725.HMPREF1325_1319	504.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0193042_22	MTase_II_00015	180.8	0	Type II methyltransferase	RM
Pfam	UHGV-0193042_22	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0193042_22	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0193042_22	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0193042_22	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0193042_24	UniRef90_E8PPG9	87.0	1.3e-19	Helix-turn-helix Fis-type	N/A
eggNOG-mapper	UHGV-0193042_24	743525.TSC_c10130	87.0	2.19e-20	N/A	N/A
structural_annotation	UHGV-0193042_24	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-0193042_25	K06909	261.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0193042_25	phrog_3717	104.9	6.5e-31	terminase large subunit	head and packaging
UniRef90	UHGV-0193042_25	UniRef90_M2BSU5	571.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0193042_25	1125725.HMPREF1325_1321	545.0	0	PBSX family phage terminase, large subunit	N/A
Pfam	UHGV-0193042_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0193042_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0193042_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_27	phrog_533	224.6	0	portal protein	head and packaging
UniRef90	UHGV-0193042_27	UniRef90_U1FPF4	597.0	0	Portal protein, A118 family	N/A
eggNOG-mapper	UHGV-0193042_27	1125725.HMPREF1325_1322	597.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0193042_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_29	phrog_581	322.6	0	minor head protein	head and packaging
UniRef90	UHGV-0193042_29	UniRef90_UPI0011C910CB	478.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0193042_29	1539298.JO41_08260	531.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0193042_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0193042_29	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
COG	UHGV-0193042_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0193042_29	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_30	1125699.HMPREF9194_01056	95.9	3e-25	N/A	N/A
UniRef90	UHGV-0193042_33	UniRef90_UPI0011C917A8	58.9	0.000000168	pyocin knob domain-containing protein	N/A
KOfam	UHGV-0193042_35	K01447	107.2	2.2e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0193042_35	phrog_9611	163.2	0	endolysin	lysis
UniRef90	UHGV-0193042_35	UniRef90_M2AXT2	260.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0193042_35	1125725.HMPREF1325_1326	244.0	0	Ami_2	N/A
Pfam	UHGV-0193042_35	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0193042_35	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0193042_35	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_39	phrog_194	55.0	0.0000000000000016	head scaffolding protein	head and packaging
UniRef90	UHGV-0193042_39	UniRef90_U1FQG8	154.0	1.4013e-44	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0193042_39	1125725.HMPREF1325_1331	154.0	2.8026e-45	Phage minor structural protein GP20	N/A
Pfam	UHGV-0193042_39	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0193042_39	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_40	phrog_422	251.7	0	major head protein	head and packaging
UniRef90	UHGV-0193042_40	UniRef90_R7FBE8	298.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0193042_40	445972.ANACOL_01845	279.0	0	N/A	N/A
PHROG	UHGV-0193042_41	phrog_541	48.5	0.00000000000013	head-tail adaptor	connector
eggNOG-mapper	UHGV-0193042_41	1539298.JO41_08170	111.0	5.4e-30	N/A	N/A
PHROG	UHGV-0193042_42	phrog_793	66.5	3.5e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0193042_42	1539298.JO41_08190	83.6	2.01e-19	Minor capsid protein	N/A
Pfam	UHGV-0193042_42	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0193042_42	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0193042_42	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_43	phrog_556	93.4	1.7e-27	minor head protein	head and packaging
UniRef90	UHGV-0193042_43	UniRef90_A0A7T3V3Z0	110.0	5.49e-29	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0193042_43	1539298.JO41_08160	134.0	2.22e-39	Minor capsid protein	N/A
Pfam	UHGV-0193042_43	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0193042_43	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_44	phrog_913	61.9	8.8e-18	minor head protein	head and packaging
UniRef90	UHGV-0193042_44	UniRef90_UPI0011C89F23	134.0	4.21e-38	minor capsid protein	N/A
Pfam	UHGV-0193042_44	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
PHROG	UHGV-0193042_45	phrog_3099	57.7	2.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0193042_45	1539298.JO41_08150	172.0	0	N/A	N/A
structural_annotation	UHGV-0193042_45	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_46	phrog_706	108.0	6.4e-32	N/A	unknown function
UniRef90	UHGV-0193042_46	UniRef90_UPI0011C87A99	166.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0193042_46	1539298.JO41_08145	167.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0193042_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0193042_46	PF06854	N/A	N/A	N/A	N/A
UniRef90	UHGV-0193042_47	UniRef90_A0A7W8GBU4	280.0	0	Chromosome segregation ATPase	N/A
eggNOG-mapper	UHGV-0193042_47	1125725.HMPREF1325_1340	267.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0193042_47	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0193042_47	PF05537,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0193042_48	phrog_384	40.7	0.000000000041	virion structural protein	head and packaging
structural_annotation	UHGV-0193042_48	PF05939,TIGR02217,COG4718	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_49	1539298.JO41_08130	206.0	0	N/A	N/A
structural_annotation	UHGV-0193042_49	PF08875,MF_00833,TIGR01600,COG4672	N/A	N/A	N/A	N/A
KOfam	UHGV-0193042_50	K13695	52.9	0.0000000000000065	nlpC; probable lipoprotein NlpC	N/A
PHROG	UHGV-0193042_50	phrog_329	47.2	0.00000000000019	minor tail protein	tail
UniRef90	UHGV-0193042_50	UniRef90_A0A0A0X0T9	184.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0193042_50	1539298.JO41_08125	184.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0193042_50	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-0193042_50	PF00877,NF008096,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_51	1539298.JO41_00015	1044.0	0	cellulase activity	N/A
COG	UHGV-0193042_51	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0193042_51	PF13550,PF03658,PF14879,MF_00460,NF040662,NF005028,COG4733,COG2914	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193042_52	313606.M23134_04174	146.0	1.18e-37	N/A	N/A
Pfam	UHGV-0193042_52	PF16940	N/A	N/A	Chloroplast envelope transporter	Tic110

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0193042	Yes	34,431	45	100	1
UHGV-0133849	No	36,584	45	100	1
UHGV-0238110	No	14,178	43	42	1