Viral OTU vOTU-011407

vOTU: vOTU-011407

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-011407
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00090 → vSUBFAM-00163 → vGENUS-01896 → vSUBGEN-12313 → vOTU-011407
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0196589
Biosample ID	N/A
Length	12,443 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	20
CDS Density	88.36%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0196589_1	K22299	55.7	0.0000000000000011	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0196589_1	phrog_3	50.4	0.000000000000077	transcriptional repressor	transcription regulation
UniRef90	UHGV-0196589_1	UniRef90_A0A6N9PW89	99.0	6.38e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0196589_1	1235790.C805_00648	58.9	0.0000000221	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0196589_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0196589_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0196589_2	K14623	367.8	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-0196589_2	phrog_8036	384.1	0	N/A	unknown function
UniRef90	UHGV-0196589_2	UniRef90_A0A1Y4LUW1	416.0	0	DNA damage-inducible protein D	N/A
eggNOG-mapper	UHGV-0196589_2	1131462.DCF50_p2453	392.0	0	N/A	N/A
AcrCatalog	UHGV-0196589_2	cluster_17589	156.0	0	NA	N/A
PADLOC	UHGV-0196589_2	Specificity_I_00032	356.2	0	Type I specificity subunit	RM
Pfam	UHGV-0196589_2	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-0196589_2	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-0196589_2	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0196589_2	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0196589_3	K14059	247.3	0	int; integrase	N/A
PHROG	UHGV-0196589_3	phrog_1	203.4	0	integrase	integration and excision
UniRef90	UHGV-0196589_3	UniRef90_UPI0019598861	578.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0196589_3	718252.FP2_06900	274.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0196589_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0196589_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0196589_3	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0196589_7	phrog_6244	47.2	0.00000000000046	N/A	unknown function
eggNOG-mapper	UHGV-0196589_7	1519439.JPJG01000044_gene958	103.0	1.07e-27	N/A	N/A
UniRef90	UHGV-0196589_8	UniRef90_A0A3F3K1J1	100.0	2.95e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0196589_8	394503.Ccel_3173	94.0	1.36e-24	N/A	N/A
Pfam	UHGV-0196589_8	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0196589_8	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0196589_9	phrog_5	61.5	2.4e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-0196589_9	UniRef90_A0A0R8V1F4	59.7	0.0000000122	Tail protein	N/A
Pfam	UHGV-0196589_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0196589_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
PHROG	UHGV-0196589_10	phrog_859	67.6	1.5e-19	portal protein	head and packaging
UniRef90	UHGV-0196589_10	UniRef90_A0A3A9EHQ6	169.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0196589_10	1078020.KEK_08242	58.2	0.00000137	Phage Mu protein F like protein	N/A
Pfam	UHGV-0196589_10	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
structural_annotation	UHGV-0196589_10	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0196589_14	phrog_15404	40.3	0.000000000048	N/A	unknown function
eggNOG-mapper	UHGV-0196589_14	397291.C804_01613	67.4	0.000000000000166	N/A	N/A
KOfam	UHGV-0196589_15	K06909	368.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0196589_15	phrog_3717	164.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0196589_15	UniRef90_R9JJE2	518.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0196589_15	397291.C804_01612	518.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0196589_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0196589_15	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0196589_15	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0196589_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0196589_15	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0196589_16	UniRef90_A0A3D1LEC5	114.0	1.75e-30	VPS37 C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0196589_16	485916.Dtox_3705	59.7	0.000000000921	N/A	N/A
structural_annotation	UHGV-0196589_16	PF13022	N/A	N/A	N/A	N/A
PHROG	UHGV-0196589_17	phrog_244	53.8	0.0000000000000042	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0196589_17	742738.HMPREF9460_00725	112.0	7.46e-31	N/A	N/A
structural_annotation	UHGV-0196589_17	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0196589_18	K07505	59.3	5.2e-17	repA; regulatory protein RepA	N/A
PHROG	UHGV-0196589_18	phrog_239	81.6	2e-24	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0196589_18	UniRef90_UPI001C123A0E	491.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-0196589_18	370438.PTH_2877	209.0	0	DNA primase	N/A
Pfam	UHGV-0196589_18	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0196589_18	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0196589_18	PF03796,MF_04154,TIGR02237,TIGR01391,COG3598,COG4643	N/A	N/A	N/A	N/A
UniRef90	UHGV-0196589_19	UniRef90_A0A3A8YWT9	84.0	3.82e-20	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0196589_19	877414.ATWA01000139_gene1368	80.5	1.25e-19	N/A	N/A
UniRef90	UHGV-0196589_20	UniRef90_UPI001C02DF0D	101.0	5e-27	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0196589_20	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0196589_20	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0196589_20	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0196589	Yes	12,443	52	100	1
UHGV-1338250	No	12,443	52	100	1
UHGV-0039806	No	7,742	52	60	1