Viral OTU vOTU-011754

vOTU: vOTU-011754

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-011754
Number of Genomes	9
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00134 → vGENUS-00111 → vSUBGEN-01859 → vOTU-011754
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0243052
Biosample ID	SAMEA4588091
Length	34,299 bps
CheckV Completeness	97.49% (High-quality)
CDS Count	49
CDS Density	93.05%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0243052_2	UniRef90_A0A412ULX9	108.0	6.42e-30	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0243052_2	679200.HMPREF9333_02253	57.4	0.000000000195	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0243052_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0243052_2	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0243052_2	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0243052_3	K01447	57.0	4.1e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0243052_3	phrog_20388	310.7	0	endolysin	lysis
UniRef90	UHGV-0243052_3	UniRef90_A0A374N1L8	542.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0243052_3	1203606.HMPREF1526_00253	315.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0243052_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0243052_3	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0243052_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0243052_3	PF01510,PF01476,PF15591,MF_02014,MF_04111,MF_01354,NF008758,NF010723,TIGR00405,COG3023,COG5004,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_4	phrog_443	64.7	2.4e-18	holin	lysis
UniRef90	UHGV-0243052_4	UniRef90_R6R2Q3	90.5	1.56e-22	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0243052_4	1298920.KI911353_gene2669	81.6	8.66e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0243052_4	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0243052_4	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_5	phrog_1863	73.6	2.1e-22	N/A	unknown function
UniRef90	UHGV-0243052_5	UniRef90_UPI001F223E8B	91.3	1.62e-22	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0243052_5	1203606.HMPREF1526_02027	77.4	8.02e-18	N/A	N/A
structural_annotation	UHGV-0243052_7	PF10651,PF15432,PF08931,TIGR03711	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_8	phrog_1067	98.8	1.3e-29	minor head protein	head and packaging
UniRef90	UHGV-0243052_8	UniRef90_A0A348ZBV6	150.0	5e-38	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0243052_8	1462527.CCDM010000003_gene3730	63.5	0.0000000651	gp58-like protein	N/A
Pfam	UHGV-0243052_8	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0243052_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0243052_8	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0243052_8	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_9	phrog_33	83.9	3.3e-24	distal tail protein Dit	tail
UniRef90	UHGV-0243052_9	UniRef90_A0A1G5CPA2	141.0	1.81e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-0243052_9	1160721.RBI_I01575	91.3	3.55e-19	Phage tail protein	N/A
COG	UHGV-0243052_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0243052_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0243052_10	K20478	70.2	4.3e-21	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0243052_10	phrog_5218	284.7	0	N/A	unknown function
UniRef90	UHGV-0243052_10	UniRef90_A0A412ULX0	1923.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0243052_10	588581.Cpap_1264	209.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0243052_10	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0243052_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0243052_10	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0243052_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_12	phrog_88	74.1	1.8e-21	major tail protein	tail
eggNOG-mapper	UHGV-0243052_12	1321782.HMPREF1986_01362	65.1	0.000000000192	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0243052_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0243052_12	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0243052_13	UniRef90_UPI000E5564A4	270.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0243052_13	1235792.C808_00089	50.1	0.00000847	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0243052_13	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0243052_13	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0243052_14	272623.L59277	51.6	0.0000006	N/A	N/A
structural_annotation	UHGV-0243052_14	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_15	phrog_19734	69.0	5.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0243052_15	86416.Clopa_0343	61.2	0.000000000164	N/A	N/A
structural_annotation	UHGV-0243052_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_16	phrog_749	56.7	3.7e-16	N/A	unknown function
UniRef90	UHGV-0243052_16	UniRef90_A0A1G5CMX8	108.0	1.06e-28	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0243052_16	1211817.CCAT010000053_gene2133	62.0	0.0000000000366	N/A	N/A
PHROG	UHGV-0243052_17	phrog_10	125.3	6.1e-37	major head protein	head and packaging
UniRef90	UHGV-0243052_17	UniRef90_A0A412ULW9	736.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0243052_17	1211817.CCAT010000053_gene2132	319.0	0	Phage capsid family	N/A
Pfam	UHGV-0243052_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0243052_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0243052_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0243052_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0243052_18	K01358	138.1	8.99998e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0243052_18	phrog_94	206.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0243052_18	UniRef90_A0A412ULU1	471.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0243052_18	86416.Clopa_0340	180.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0243052_18	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0243052_18	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0243052_18	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_19	phrog_12	98.0	7.9e-29	portal protein	head and packaging
UniRef90	UHGV-0243052_19	UniRef90_A0A412ULV9	753.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0243052_19	1415774.U728_1254	263.0	0	Phage portal protein	N/A
Pfam	UHGV-0243052_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0243052_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0243052_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0243052_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_20	phrog_9	287.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0243052_20	UniRef90_A0A412UM03	1044.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0243052_20	86416.Clopa_0337	612.0	0	Phage Terminase	N/A
Pfam	UHGV-0243052_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0243052_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0243052_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0243052_20	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_21	phrog_5110	83.0	2.4e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0243052_21	UniRef90_A0A1M5U1D5	113.0	1.2e-30	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0243052_21	1211817.CCAT010000053_gene2128	100.0	3.14e-26	N/A	N/A
Pfam	UHGV-0243052_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0243052_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_22	phrog_119	71.2	1.4e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0243052_22	UniRef90_A0A412ULY9	223.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0243052_22	1158607.UAU_01026	102.0	1.02e-26	HNH endonuclease	N/A
Pfam	UHGV-0243052_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0243052_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0243052_23	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_24	phrog_3584	154.1	1.4013e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0243052_24	1235800.C819_00515	67.8	0.000000000123	N/A	N/A
structural_annotation	UHGV-0243052_24	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_27	phrog_8684	92.7	2.3e-27	N/A	unknown function
UniRef90	UHGV-0243052_27	UniRef90_A0A374DV44	169.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0243052_27	411477.PARMER_02066	80.5	2.25e-17	YopX protein	N/A
Pfam	UHGV-0243052_27	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0243052_27	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0243052_27	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_28	phrog_2118	121.2	9.2e-36	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0243052_28	UniRef90_A0A374DVG7	243.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0243052_28	610130.Closa_0730	149.0	4.2039e-45	HNH endonuclease	N/A
Pfam	UHGV-0243052_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0243052_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0243052_28	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_30	phrog_824	144.3	3.60134e-43	N/A	unknown function
UniRef90	UHGV-0243052_30	UniRef90_A0A3D3D6C6	249.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0243052_30	397288.C806_00096	157.0	0	VRR_NUC	N/A
Pfam	UHGV-0243052_30	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0243052_30	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_31	phrog_24518	78.6	8.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0243052_31	1519439.JPJG01000077_gene922	108.0	1.05e-26	N/A	N/A
KOfam	UHGV-0243052_32	K03427	158.9	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0243052_32	phrog_6380	363.4	0	DNA methyltransferase	other
UniRef90	UHGV-0243052_32	UniRef90_UPI001B3C6DA9	658.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0243052_32	1444306.JFZC01000034_gene2643	308.0	0	type I restriction-modification system	N/A
PADLOC	UHGV-0243052_32	MTase_I_00010	92.0	5.8e-27	Type I methyltransferase	RM
Pfam	UHGV-0243052_32	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0243052_32	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0243052_32	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0243052_33	K03497	155.5	0	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0243052_33	phrog_6218	236.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0243052_33	UniRef90_A0A3D3D7T1	798.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0243052_33	1408437.JNJN01000030_gene1074	226.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0243052_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0243052_33	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0243052_33	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0243052_33	PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0243052_37	COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_38	phrog_6058	42.6	0.0000000000065	N/A	unknown function
structural_annotation	UHGV-0243052_38	NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_39	phrog_599	41.6	0.000000000024	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0243052_39	UniRef90_UPI0015F48AC0	153.0	0	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0243052_39	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0243052_39	PF14354,TIGR03655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0243052_40	UniRef90_UPI000E4DC4DA	142.0	1.73e-40	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0243052_40	PF15597	N/A	N/A	N/A	N/A
KOfam	UHGV-0243052_41	K00390	97.0	2e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0243052_41	phrog_424	120.4	1.4e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0243052_41	UniRef90_UPI001C034617	591.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0243052_41	1408437.JNJN01000032_gene2312	336.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0243052_41	BrxP_00001	80.0	2.2e-23	BrxP	BREX
Pfam	UHGV-0243052_41	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0243052_41	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0243052_41	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_43	phrog_585	115.0	4.8e-34	N/A	unknown function
UniRef90	UHGV-0243052_43	UniRef90_UPI00051C896C	143.0	1.32997e-41	N/A	N/A
eggNOG-mapper	UHGV-0243052_43	1033744.CAEL01000029_gene1306	128.0	4.7e-36	N/A	N/A
Pfam	UHGV-0243052_43	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0243052_43	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
UniRef90	UHGV-0243052_45	UniRef90_A0A374DVN3	161.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0243052_45	1219626.HMPREF1639_07045	47.8	0.00000322	N/A	N/A
UniRef90	UHGV-0243052_46	UniRef90_A0A373XLN2	156.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0243052_46	1408823.AXUS01000025_gene2653	58.9	0.00000000852	N/A	N/A
structural_annotation	UHGV-0243052_46	PF05339,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0243052_47	phrog_1914	143.7	1.10002e-42	N/A	unknown function
UniRef90	UHGV-0243052_47	UniRef90_A0A374NDM7	328.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0243052_47	1160721.RBI_I01604	163.0	0	N/A	N/A
Pfam	UHGV-0243052_47	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0243052_47	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0243052_47	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0243052_48	UniRef90_UPI000E52DA24	736.0	0	zinc ribbon domain-containing protein	N/A
Pfam	UHGV-0243052_48	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-0243052_48	PF18933,PF02883,MF_02248,NF008627,COG5435,COG2847	N/A	N/A	N/A	N/A
KOfam	UHGV-0243052_49	K14059	91.2	1.7e-26	int; integrase	N/A
PHROG	UHGV-0243052_49	phrog_1	113.9	1.9e-33	integrase	integration and excision
UniRef90	UHGV-0243052_49	UniRef90_A0A1G5CL52	793.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-0243052_49	693746.OBV_41260	182.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0243052_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0243052_49	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0243052_49	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0243052	Yes	34,299	40	97	1
UHGV-1437724	No	32,131	40	91	1
UHGV-0373656	No	31,378	40	89	1
UHGV-0043403	No	31,367	40	89	1
UHGV-1527758	No	31,367	40	89	1
UHGV-0089407	No	31,170	40	89	1
UHGV-1431384	No	31,170	40	89	1
UHGV-0333077	No	29,935	40	85	1
UHGV-1902829	No	24,723	40	70	1