Viral OTU vOTU-012275

vOTU: vOTU-012275

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-012275
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00226 → vSUBFAM-02036 → vGENUS-16632 → vSUBGEN-30156 → vOTU-012275
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Paludibacteraceae → RF16
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0024653
Biosample ID	SAMEA4766250
Length	43,459 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	67
CDS Density	92.51%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0024653_3	PF10628	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024653_6	PF08299,NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_7	phrog_824	125.9	1.4e-37	N/A	unknown function
UniRef90	UHGV-0024653_7	UniRef90_A0A414ZEU3	97.4	3.64e-23	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0024653_7	1235792.C808_00622	86.7	1.35e-18	VRR_NUC	N/A
Pfam	UHGV-0024653_7	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0024653_7	PF08774	N/A	N/A	N/A	N/A
Pfam	UHGV-0024653_9	PF21732	N/A	N/A	N/A	DUF6864
KOfam	UHGV-0024653_10	K08640	115.4	8.4e-34	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0024653_10	phrog_894	107.5	1.4e-31	endolysin	lysis
UniRef90	UHGV-0024653_10	UniRef90_A0A255TPD5	138.0	3.49e-39	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0024653_10	1088721.NSU_3108	135.0	6.96e-39	Peptidase M15	N/A
Pfam	UHGV-0024653_10	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0024653_10	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024653_10	PF08291,COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024653_16	PF09067	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024653_23	UniRef90_A0A1V6HD22	374.0	0	Bacterial Ig-like domain (Group 2)	N/A
PHROG	UHGV-0024653_26	phrog_23416	116.4	1.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0024653_26	585502.HMPREF0645_2512	109.0	5.68e-23	N/A	N/A
COG	UHGV-0024653_26	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_27	phrog_7376	49.8	0.000000000000031	portal protein	head and packaging
eggNOG-mapper	UHGV-0024653_27	1166018.FAES_1823	137.0	2.51e-31	N/A	N/A
PHROG	UHGV-0024653_29	phrog_15220	136.5	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0024653_29	1237149.C900_05356	88.2	0.00000000000000458	N/A	N/A
PHROG	UHGV-0024653_30	phrog_18891	51.2	0.0000000000000087	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0024653_30	1347393.HG726021_gene383	62.0	0.000000856	Phage-related minor tail protein	N/A
COG	UHGV-0024653_30	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0024653_35	phrog_4758	237.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0024653_35	UniRef90_A0A6J5LJ23	316.0	0	Terminase RNaseH-like domain containing protein	N/A
eggNOG-mapper	UHGV-0024653_35	742767.HMPREF9456_03337	311.0	0	domain protein	N/A
COG	UHGV-0024653_35	COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_37	phrog_13321	45.0	0.000000000001	N/A	unknown function
UniRef90	UHGV-0024653_37	UniRef90_A0A1H0N0K7	394.0	0	DNA repair photolyase	N/A
eggNOG-mapper	UHGV-0024653_37	1122971.BAME01000006_gene910	556.0	0	DNA photolyase activity	N/A
COG	UHGV-0024653_37	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0024653_37	PF20903,MF_01865,NF033668,COG2100	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_38	phrog_842	65.0	1.5e-18	beta-glucosyl-HMC-alpha-glucosyltransferase	other
Pfam	UHGV-0024653_38	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-0024653_38	PF20691,MF_00057,NF038299,COG1216	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024653_39	UniRef90_A0A3R6C0L8	79.0	0.00000000000000834	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0024653_39	1122971.BAME01000006_gene912	165.0	0	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	N/A
COG	UHGV-0024653_39	COG4123	N/A	N/A	tRNA1(Val) A37 N6-methylase TrmN6	N/A
eggNOG-mapper	UHGV-0024653_40	1122971.BAME01000006_gene912	54.7	0.0000000408	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)	N/A
COG	UHGV-0024653_40	COG4123	N/A	N/A	tRNA1(Val) A37 N6-methylase TrmN6	N/A
KOfam	UHGV-0024653_41	K00571	120.8	1.5e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0024653_41	phrog_67	97.9	1.5e-30	DNA methyltransferase	other
UniRef90	UHGV-0024653_41	UniRef90_B0MZV1	405.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0024653_41	445970.ALIPUT_02676	405.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0024653_41	MTase_II_00157	74.6	2.4e-27	Type II methyltransferase	RM
Pfam	UHGV-0024653_41	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0024653_41	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0024653_41	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024653_42	UniRef90_F3QSQ3	52.8	0.000000108	Conserved domain protein	N/A
structural_annotation	UHGV-0024653_45	PF10922	N/A	N/A	N/A	N/A
KOfam	UHGV-0024653_46	K00390	67.9	1.7e-19	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0024653_46	phrog_424	113.7	1.5e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0024653_46	UniRef90_A0A3N2NAZ8	274.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0024653_46	357276.EL88_11445	159.0	1.12104e-44	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0024653_46	BrxP_00001	56.3	2.1e-16	BrxP	BREX
Pfam	UHGV-0024653_46	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0024653_46	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0024653_46	PF01507,MF_00064,NF006327,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0024653_47	K00558	193.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0024653_47	phrog_116	208.8	0	DNA methyltransferase	other
UniRef90	UHGV-0024653_47	UniRef90_A0A3E4VX46	584.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0024653_47	411477.PARMER_02067	580.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0024653_47	MTase_II_00164	106.5	2.66247e-44	Type II methyltransferase	RM
Pfam	UHGV-0024653_47	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0024653_47	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0024653_47	PF00145,MF_02100,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_48	phrog_874	93.5	1.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0024653_48	563008.HMPREF0665_02420	154.0	8.40779e-45	N/A	N/A
structural_annotation	UHGV-0024653_48	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_54	phrog_16304	58.9	9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0024653_54	521097.Coch_0881	55.5	0.00000369	N/A	N/A
Pfam	UHGV-0024653_54	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0024653_54	PF07106,MF_01819,NF041413,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_55	phrog_4932	41.0	0.00000000003	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0024653_55	PF11325	N/A	N/A	N/A	DUF3127
structural_annotation	UHGV-0024653_55	PF11325,MF_00984,NF005579,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_56	phrog_72	54.4	0.0000000000000027	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024653_56	UniRef90_UPI0008D9D600	59.3	0.000000015	recombination protein NinB	N/A
structural_annotation	UHGV-0024653_56	NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0024653_57	phrog_155	123.8	1.3e-36	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024653_57	UniRef90_A0A6J5MMW5	119.0	4.82e-30	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-0024653_57	585502.HMPREF0645_2601	114.0	4.52e-29	Erf family	N/A
Pfam	UHGV-0024653_57	PF04404	N/A	N/A	ERF superfamily	ERF
Pfam	UHGV-0024653_58	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
Pfam	UHGV-0024653_63	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0024653_66	PF07022	N/A	N/A	N/A	N/A
KOfam	UHGV-0024653_67	K04763	79.8	3.9e-23	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0024653_67	phrog_1	95.2	8.6e-28	integrase	integration and excision
UniRef90	UHGV-0024653_67	UniRef90_R6DY43	220.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-0024653_67	411479.BACUNI_00309	213.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0024653_67	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-0024653_67	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0024653_67	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0024653_67	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0024653_67	PF00589,MF_01808,NF002331,COG4974	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0024653	Yes	43,459	48	100	1
UHGV-0005335	No	47,143	47	100	1
UHGV-0006298	No	36,495	48	85	1