Viral OTU vOTU-012874

vOTU: vOTU-012874

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-012874
Number of Genomes	4
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00089 → vGENUS-01161 → vSUBGEN-15912 → vOTU-012874
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_D → Ruminococcus_D bicirculans
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1410751
Biosample ID	SAMN02334121
Length	37,237 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	55
CDS Density	91.18%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1410751_5	UniRef90_R6T919	684.0	0	Putative replication protein	N/A
eggNOG-mapper	UHGV-1410751_5	650150.ERH_1292	228.0	0	Putative viral replication protein	N/A
Pfam	UHGV-1410751_5	PF02407	N/A	N/A	Putative viral replication protein	Viral_Rep
Pfam	UHGV-1410751_5	PF00910	N/A	N/A	RNA helicase	RNA_helicase
structural_annotation	UHGV-1410751_5	PF02407,PF00519,MF_04000,TIGR01650,COG0606	N/A	N/A	N/A	N/A
KOfam	UHGV-1410751_6	K14059	249.0	0	int; integrase	N/A
PHROG	UHGV-1410751_6	phrog_1	213.1	0	integrase	integration and excision
UniRef90	UHGV-1410751_6	UniRef90_A0A1C6FGR9	756.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1410751_6	1408823.AXUS01000024_gene2685	173.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-1410751_6	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1410751_6	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1410751_6	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1410751_6	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1410751_7	K02342	202.1	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-1410751_7	phrog_192	182.4	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410751_7	UniRef90_A0A373VNA0	851.0	0	Exonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1410751_7	864565.HMPREF0379_1203	167.0	4.52059e-42	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity	N/A
PADLOC	UHGV-1410751_7	cd06127	146.6	9.94922e-44	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-1410751_7	PF00929	N/A	N/A	Exonuclease	RNase_T
NCBIFam	UHGV-1410751_7	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-1410751_7	COG2176	N/A	N/A	DNA polymerase III, alpha subunit (gram-positive type)	N/A
PHROG	UHGV-1410751_8	phrog_20936	41.7	0.00000000002	N/A	unknown function
UniRef90	UHGV-1410751_8	UniRef90_A0A374E958	142.0	4.48416e-43	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1410751_8	861450.HMPREF0080_02020	50.1	0.000000413	N/A	N/A
Pfam	UHGV-1410751_8	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1410751_8	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1410751_9	K07727	40.7	0.000000000053	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-1410751_9	phrog_8	64.5	2.2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1410751_9	UniRef90_A0A373XY93	243.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1410751_9	1160721.RBI_I01471	69.3	0.00000000000017	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1410751_9	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1410751_9	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410751_10	UniRef90_A0A373XXU1	131.0	1.43e-38	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1410751_10	428125.CLOLEP_02737	53.1	0.0000000328	N/A	N/A
structural_annotation	UHGV-1410751_12	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_15	phrog_757	202.1	0	DNA methyltransferase	other
UniRef90	UHGV-1410751_15	UniRef90_A0A349YFI2	260.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1410751_15	1095750.HMPREF9970_0173	240.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1410751_15	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1410751_15	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1410751_20	K10906	103.0	2.2e-36	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1410751_20	phrog_412	264.9	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410751_20	UniRef90_A0A1C6FHM2	526.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-1410751_20	1454004.AW11_02382	189.0	0	N/A	N/A
Pfam	UHGV-1410751_20	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1410751_20	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1410751_20	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_21	phrog_3657	352.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1410751_21	1121864.OMO_02139	232.0	0	N/A	N/A
KOfam	UHGV-1410751_22	K03111	52.3	0.000000000000015	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1410751_22	phrog_44	51.1	0.000000000000039	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410751_22	UniRef90_A0A1C6FIL5	280.0	0	Helix-destabilizing protein	N/A
eggNOG-mapper	UHGV-1410751_22	1121370.AQUY01000001_gene1006	55.5	0.000000102	Single-strand binding protein family	N/A
Pfam	UHGV-1410751_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-1410751_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1410751_22	PF00436,MF_00984,TIGR04418,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_23	phrog_8841	488.8	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410751_23	UniRef90_A0A1C6FHQ3	1269.0	0	Superfamily II helicase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-1410751_23	742738.HMPREF9460_02495	612.0	0	N/A	N/A
Pfam	UHGV-1410751_23	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1410751_23	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1410751_23	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410751_23	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-1410751_25	K17677	422.1	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1410751_25	phrog_16	253.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410751_25	UniRef90_A0A373V5W0	1003.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-1410751_25	742738.HMPREF9460_02499	637.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-1410751_25	mREase_IV_00005	115.4	4.6e-34	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1410751_25	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1410751_25	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1410751_25	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1410751_25	PF04851,PF16203,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_26	phrog_824	125.6	2e-37	N/A	unknown function
UniRef90	UHGV-1410751_26	UniRef90_A0A373V639	248.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1410751_26	641107.CDLVIII_1315	103.0	1.29e-26	VRR-NUC domain	N/A
Pfam	UHGV-1410751_26	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1410751_26	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_28	phrog_1384	110.2	1.8e-32	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1410751_28	411490.ANACAC_02385	192.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1410751_28	PF14236,MF_02210,NF007025,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_29	phrog_424	81.1	1.3e-23	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1410751_29	UniRef90_C0CTA2	474.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1410751_29	445972.ANACOL_01819	494.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1410751_29	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1410751_29	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_30	phrog_36	44.0	0.0000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1410751_30	UniRef90_A0A374HLM1	257.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1410751_30	1304880.JAGB01000002_gene2225	52.4	0.00000127	N/A	N/A
structural_annotation	UHGV-1410751_30	PF07374	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_31	phrog_104	251.4	0	portal protein	head and packaging
UniRef90	UHGV-1410751_31	UniRef90_A0A373V3S0	791.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1410751_31	1280698.AUJS01000007_gene1033	490.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1410751_31	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_32	phrog_2494	170.6	0	minor head protein	head and packaging
UniRef90	UHGV-1410751_32	UniRef90_A0A316LS12	176.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1410751_32	875454.BAEW01000017_gene1600	153.0	3.84001e-40	N/A	N/A
PHROG	UHGV-1410751_33	phrog_34144	69.5	3.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1410751_33	742742.HMPREF9452_00763	81.3	5.01e-20	N/A	N/A
structural_annotation	UHGV-1410751_33	PF20111	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_34	phrog_17688	300.8	0	N/A	unknown function
UniRef90	UHGV-1410751_34	UniRef90_A0A373V412	845.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1410751_34	665950.HMPREF1025_02532	512.0	0	phage terminase, large subunit	N/A
COG	UHGV-1410751_34	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1410751_34	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_35	phrog_233	65.3	1.7e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-1410751_35	UniRef90_A0A7Z2B590	76.6	0.00000000000000573	N/A	N/A
eggNOG-mapper	UHGV-1410751_35	1280698.AUJS01000007_gene1037	66.6	0.00000000000728	N/A	N/A
Pfam	UHGV-1410751_35	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1410751_35	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_36	phrog_32396	128.1	2.6e-38	N/A	unknown function
UniRef90	UHGV-1410751_36	UniRef90_A0A373V3S9	588.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1410751_36	936375.HMPREF1152_0679	324.0	0	Phage capsid family	N/A
Pfam	UHGV-1410751_36	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1410751_36	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_37	phrog_137	53.3	0.0000000000000037	head-tail adaptor Ad1	connector
UniRef90	UHGV-1410751_37	UniRef90_R6C7E8	160.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1410751_37	873448.STRPO_0287	87.8	3.25e-20	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1410751_37	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1410751_37	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_38	phrog_501	66.7	3.2e-19	head closure Hc1	connector
UniRef90	UHGV-1410751_38	UniRef90_R6CEU4	147.0	8.26766e-44	N/A	N/A
eggNOG-mapper	UHGV-1410751_38	1121864.OMO_02155	131.0	2.7e-38	N/A	N/A
structural_annotation	UHGV-1410751_38	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_39	phrog_387	60.7	2.3e-17	neck protein	connector
eggNOG-mapper	UHGV-1410751_39	1423775.BAMN01000011_gene600	67.4	0.0000000000000729	N/A	N/A
PHROG	UHGV-1410751_40	phrog_123	63.7	3.2e-18	tail terminator	connector
UniRef90	UHGV-1410751_40	UniRef90_A0A2A5RIK6	112.0	9.6e-30	N/A	N/A
eggNOG-mapper	UHGV-1410751_40	1321820.HMPREF1983_00928	115.0	9.8e-32	N/A	N/A
structural_annotation	UHGV-1410751_40	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_41	phrog_117	163.2	0	major tail protein	tail
UniRef90	UHGV-1410751_41	UniRef90_A0A373V4D0	367.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1410751_41	1121864.OMO_02158	191.0	0	domain, Protein	N/A
COG	UHGV-1410751_41	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410751_41	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_42	phrog_1526	72.5	4.9e-21	N/A	unknown function
UniRef90	UHGV-1410751_42	UniRef90_G2SN49	55.8	0.0000000289	N/A	N/A
eggNOG-mapper	UHGV-1410751_42	665950.HMPREF1025_02524	72.4	0.00000000000000163	N/A	N/A
PHROG	UHGV-1410751_43	phrog_1633	130.6	6.1e-39	N/A	unknown function
UniRef90	UHGV-1410751_43	UniRef90_A0A0E3WFP2	112.0	1.2e-29	N/A	N/A
eggNOG-mapper	UHGV-1410751_43	1280698.AUJS01000007_gene1046	103.0	8.77e-27	N/A	N/A
Pfam	UHGV-1410751_43	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1410751_43	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_44	phrog_6900	264.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1410751_44	585203.SMSK564_1276	315.0	0	phage tail tape measure protein	N/A
COG	UHGV-1410751_44	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410751_44	PF16535	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_45	phrog_1194	49.9	0.000000000000048	N/A	unknown function
eggNOG-mapper	UHGV-1410751_45	1160721.RBI_II00527	103.0	7.48e-27	N/A	N/A
structural_annotation	UHGV-1410751_45	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_46	phrog_6616	50.6	1.9e-25	tail protein	tail
eggNOG-mapper	UHGV-1410751_46	1160721.RBI_II00526	709.0	0	N/A	N/A
structural_annotation	UHGV-1410751_46	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_50	phrog_13256	78.1	6.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-1410751_50	1160721.RBI_II00522	97.8	2.65e-26	N/A	N/A
PHROG	UHGV-1410751_51	phrog_1863	58.3	3.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-1410751_51	1226322.HMPREF1545_04027	71.6	0.00000000000000223	N/A	N/A
KOfam	UHGV-1410751_52	K07273	214.4	0	acm; lysozyme	N/A
PHROG	UHGV-1410751_52	phrog_291	183.3	0	endolysin	lysis
UniRef90	UHGV-1410751_52	UniRef90_A0A1C6IMI8	494.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1410751_52	246199.CUS_5914	298.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1410751_52	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1410751_52	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1410751_52	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1410751_52	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
KOfam	UHGV-1410751_53	K03071	47.4	0.00000000000029	secB; preprotein translocase subunit SecB	N/A
PHROG	UHGV-1410751_53	phrog_21664	48.1	0.00000000000023	N/A	unknown function
UniRef90	UHGV-1410751_53	UniRef90_UPI001AE7FA25	92.4	1.94e-21	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-1410751_53	397290.C810_04111	71.2	0.000000000000053	Preprotein translocase subunit SecB	N/A
Pfam	UHGV-1410751_53	PF02556	N/A	N/A	Preprotein translocase subunit SecB	SecB
structural_annotation	UHGV-1410751_53	PF02556,MF_00821,NF004391,COG1952	N/A	N/A	N/A	N/A
PHROG	UHGV-1410751_55	phrog_14664	42.4	0.0000000000081	N/A	unknown function
eggNOG-mapper	UHGV-1410751_55	883103.HMPREF9703_01676	52.4	0.0000087	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1410751	Yes	37,237	44	100	1
UHGV-1469662	No	30,722	45	90	1
UHGV-1861014	No	14,662	46	43	1
UHGV-0326134	No	12,485	45	37	1