Viral OTU vOTU-013760

vOTU: vOTU-013760

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-013760
Number of Genomes	14
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00027 → vGENUS-00912 → vSUBGEN-42256 → vOTU-013760
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E sp900314705
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2179925
Biosample ID	N/A
Length	37,365 bps
CheckV Completeness	97.47% (High-quality)
CDS Count	55
CDS Density	91.97%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2179925_1	phrog_18586	80.3	4e-24	N/A	unknown function
UniRef90	UHGV-2179925_1	UniRef90_K0XKW7	172.0	0	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_1	1410661.JNKW01000001_gene491	163.0	0	N/A	N/A
structural_annotation	UHGV-2179925_1	PF04471,COG1715	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2179925_2	1235802.C823_05251	142.0	2.57979e-42	N/A	N/A
structural_annotation	UHGV-2179925_2	PF19363,COG3355	N/A	N/A	N/A	N/A
UniRef90	UHGV-2179925_3	UniRef90_M9LXJ4	100.0	2.35e-20	Polyketide synthase module	N/A
eggNOG-mapper	UHGV-2179925_3	1410661.JNKW01000001_gene489	237.0	0	N/A	N/A
KOfam	UHGV-2179925_5	K01447	119.4	4.2e-35	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2179925_5	phrog_670	125.2	6.5e-37	endolysin	lysis
UniRef90	UHGV-2179925_5	UniRef90_A0A348ZBJ3	529.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_5	1232453.BAIF02000030_gene2529	216.0	0	Ami_2	N/A
Pfam	UHGV-2179925_5	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2179925_5	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
structural_annotation	UHGV-2179925_5	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_6	phrog_199	89.8	2.8e-26	holin	lysis
UniRef90	UHGV-2179925_6	UniRef90_A0A348ZBJ4	278.0	0	Holin	N/A
eggNOG-mapper	UHGV-2179925_6	411459.RUMOBE_01714	207.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-2179925_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2179925_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-2179925_6	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-2179925_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_9	phrog_18190	47.6	9.6e-23	N/A	unknown function
UniRef90	UHGV-2179925_9	UniRef90_UPI000F53DFF3	59.7	0.00000737	tail fiber domain-containing protein	N/A
structural_annotation	UHGV-2179925_9	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_10	phrog_1194	42.8	0.0000000000068	N/A	unknown function
eggNOG-mapper	UHGV-2179925_10	1235790.C805_00088	85.5	2.97e-19	N/A	N/A
Pfam	UHGV-2179925_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2179925_10	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_11	phrog_1535	236.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2179925_11	411459.RUMOBE_01384	100.0	1.66e-18	phage tail tape measure protein	N/A
COG	UHGV-2179925_11	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-2179925_12	phrog_5319	62.6	4.2e-18	outer membrane protein	other
UniRef90	UHGV-2179925_12	UniRef90_A0A1Q6JN93	114.0	3.48e-28	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_12	1042156.CXIVA_15870	97.4	1.94e-21	sh3 domain protein	N/A
Pfam	UHGV-2179925_12	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
COG	UHGV-2179925_12	COG3103	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_13	phrog_706	141.2	5.89947e-42	N/A	unknown function
UniRef90	UHGV-2179925_13	UniRef90_UPI001B3C82AE	370.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2179925_13	1160721.RBI_II00530	204.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2179925_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2179925_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_14	phrog_11299	129.7	1.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-2179925_14	1449050.JNLE01000003_gene3883	100.0	2.34e-25	N/A	N/A
structural_annotation	UHGV-2179925_14	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_15	phrog_3099	120.3	1.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-2179925_15	1160721.RBI_II00532	189.0	0	N/A	N/A
structural_annotation	UHGV-2179925_15	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_16	phrog_3266	97.6	9.4e-29	tail completion	connector
eggNOG-mapper	UHGV-2179925_16	1449050.JNLE01000003_gene3885	151.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-2179925_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_17	phrog_556	118.0	3.7e-35	minor head protein	head and packaging
UniRef90	UHGV-2179925_17	UniRef90_UPI001B3C5A2B	325.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2179925_17	1449050.JNLE01000003_gene3886	137.0	1.61e-39	N/A	N/A
Pfam	UHGV-2179925_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2179925_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_18	phrog_3366	43.8	0.0000000000014	N/A	unknown function
eggNOG-mapper	UHGV-2179925_18	1449050.JNLE01000003_gene3887	64.7	0.00000000000567	N/A	N/A
PHROG	UHGV-2179925_19	phrog_541	92.8	2.7e-27	head-tail adaptor	connector
UniRef90	UHGV-2179925_19	UniRef90_A0A371AQT0	98.2	4.16e-24	N/A	N/A
eggNOG-mapper	UHGV-2179925_19	1449050.JNLE01000003_gene3888	103.0	7.08e-27	N/A	N/A
PHROG	UHGV-2179925_20	phrog_422	237.0	0	major head protein	head and packaging
eggNOG-mapper	UHGV-2179925_20	693746.OBV_18090	343.0	0	N/A	N/A
structural_annotation	UHGV-2179925_20	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_21	phrog_194	104.6	1.1e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-2179925_21	UniRef90_UPI001B3C6D0D	330.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2179925_21	411470.RUMGNA_02218	132.0	1.18e-36	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-2179925_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2179925_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_23	phrog_581	322.3	0	minor head protein	head and packaging
UniRef90	UHGV-2179925_23	UniRef90_UPI001B3C97A7	1147.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2179925_23	742765.HMPREF9457_02121	369.0	0	N/A	N/A
Pfam	UHGV-2179925_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2179925_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2179925_23	PF06152,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_24	phrog_533	300.8	0	portal protein	head and packaging
UniRef90	UHGV-2179925_24	UniRef90_UPI001B3C997D	874.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-2179925_24	1304866.K413DRAFT_3035	451.0	0	N/A	N/A
structural_annotation	UHGV-2179925_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2179925_25	K06909	83.2	3.3e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2179925_25	phrog_2	81.6	1.5e-23	terminase large subunit	head and packaging
UniRef90	UHGV-2179925_25	UniRef90_UPI001B3C8BA8	858.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-2179925_25	1304866.K413DRAFT_3034	599.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2179925_25	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-2179925_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2179925_25	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_26	phrog_309	131.4	2.3e-39	terminase small subunit	head and packaging
UniRef90	UHGV-2179925_26	UniRef90_UPI001B3C9B19	239.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_26	374526.A5GYP7_9CAUD	132.0	8.12e-38	endonuclease activity	N/A
structural_annotation	UHGV-2179925_26	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_29	phrog_8680	248.8	0	N/A	unknown function
UniRef90	UHGV-2179925_29	UniRef90_A0A373KTP5	285.0	0	N/A	N/A
eggNOG-mapper	UHGV-2179925_29	411470.RUMGNA_02208	228.0	0	N/A	N/A
Pfam	UHGV-2179925_29	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-2179925_29	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_30	phrog_36	88.3	8.6e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-2179925_30	UniRef90_A0A6B3W4B2	100.0	3e-24	N/A	N/A
eggNOG-mapper	UHGV-2179925_30	1408424.JHYI01000032_gene3838	102.0	1.23e-25	N/A	N/A
Pfam	UHGV-2179925_30	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-2179925_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-2179925_30	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2179925_31	PF10571	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2179925_32	PF09889	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_35	phrog_277	90.5	2.2e-26	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2179925_35	UniRef90_K2G5E4	90.5	1.23e-17	Phage_rep_O domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_35	1230341.MJ3_13494	90.5	2.07e-18	Bacteriophage replication protein O	N/A
Pfam	UHGV-2179925_35	PF04492	N/A	N/A	Bacteriophage replication protein O	Phage_rep_O
NCBIFam	UHGV-2179925_35	TIGR01610.1	N/A	N/A	phage replication protein O, N-terminal domain	N/A
structural_annotation	UHGV-2179925_35	PF01978,MF_01819,TIGR01610,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_36	phrog_3490	133.4	1.3e-39	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2179925_36	UniRef90_A0A1C6FNL5	192.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_36	357809.Cphy_2986	173.0	0	N/A	N/A
Pfam	UHGV-2179925_36	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-2179925_36	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-2179925_37	K03111	118.4	9.3e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2179925_37	phrog_44	124.7	7.5e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2179925_37	UniRef90_A0A7C7EMB2	129.0	6.14e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2179925_37	428125.CLOLEP_03546	111.0	1.31e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-2179925_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2179925_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2179925_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2179925_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2179925_37	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_38	phrog_1227	265.5	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2179925_38	UniRef90_A0A3D0X749	351.0	0	N/A	N/A
eggNOG-mapper	UHGV-2179925_38	1120998.AUFC01000030_gene2216	300.0	0	N/A	N/A
Pfam	UHGV-2179925_38	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-2179925_38	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-2179925_38	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_39	phrog_21613	103.6	1.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-2179925_39	1120998.AUFC01000030_gene2214	146.0	2.95954e-42	N/A	N/A
KOfam	UHGV-2179925_40	K03546	50.7	0.000000000000014	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-2179925_40	phrog_1499	272.1	0	N/A	unknown function
UniRef90	UHGV-2179925_40	UniRef90_A0A315Y1S7	556.0	0	Exonuclease SbcC	N/A
eggNOG-mapper	UHGV-2179925_40	1120998.AUFC01000030_gene2215	589.0	0	DNA recombination	N/A
Pfam	UHGV-2179925_40	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-2179925_40	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-2179925_40	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_45	phrog_2232	216.5	0	N/A	unknown function
UniRef90	UHGV-2179925_45	UniRef90_UPI00164B82D7	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-2179925_45	218284.CCDN010000005_gene3396	151.0	6.0396e-42	N/A	N/A
Pfam	UHGV-2179925_45	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-2179925_45	PF14337,TIGR03899	N/A	N/A	N/A	N/A
UniRef90	UHGV-2179925_47	UniRef90_A0A1Y4SQ86	81.3	1.05e-18	N/A	N/A
eggNOG-mapper	UHGV-2179925_47	646413.C5IUM3_9CAUD	74.7	6.31e-17	N/A	N/A
Pfam	UHGV-2179925_47	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-2179925_47	PF05339,MF_00535,NF002773,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2179925_48	phrog_5079	64.9	9.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-2179925_48	883112.HMPREF9707_01632	48.5	0.000000253	N/A	N/A
KOfam	UHGV-2179925_49	K01356	166.4	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2179925_49	phrog_4	131.7	6.4e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-2179925_49	UniRef90_A0A1Y4HYP5	226.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-2179925_49	411473.RUMCAL_03095	196.0	0	N/A	N/A
Pfam	UHGV-2179925_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-2179925_49	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
NCBIFam	UHGV-2179925_49	TIGR00498.1	N/A	N/A	transcriptional repressor LexA	N/A
COG	UHGV-2179925_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2179925_49	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2179925_50	PF20505,MF_00194,NF001462,COG2974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2179925_51	PF15968	N/A	N/A	N/A	N/A
KOfam	UHGV-2179925_52	K07729	50.6	0.000000000000042	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-2179925_52	phrog_8	56.5	6.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-2179925_52	UniRef90_UPI00164BD4EE	82.8	2.75e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2179925_52	931626.Awo_c14370	63.2	0.0000000000239	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-2179925_52	retron_type_VI_hth_cluster2_1	42.4	0.000000000018	N/A	Retron
Pfam	UHGV-2179925_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2179925_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-2179925_53	UniRef90_A0A348ZC97	365.0	0	UDP-N-acetylglucosamine kinase	N/A
eggNOG-mapper	UHGV-2179925_53	1408437.JNJN01000002_gene1419	197.0	0	zeta toxin	N/A
Pfam	UHGV-2179925_53	PF06414	N/A	N/A	Zeta toxin	Zeta_toxin
COG	UHGV-2179925_53	COG4185	N/A	N/A	Predicted ABC-type ATPase or kinase	N/A
structural_annotation	UHGV-2179925_53	PF06414,MF_00234,NF041574,COG4185	N/A	N/A	N/A	N/A
KOfam	UHGV-2179925_54	K06400	353.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2179925_54	phrog_95	349.9	0	integrase	integration and excision
UniRef90	UHGV-2179925_54	UniRef90_A0A354HPL0	938.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-2179925_54	537013.CLOSTMETH_01697	447.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-2179925_54	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2179925_54	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-2179925_54	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2179925_54	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-2179925_55	K06334	222.6	0	cotJC; spore coat protein JC	N/A
PHROG	UHGV-2179925_55	phrog_7573	181.5	0	N/A	unknown function
UniRef90	UHGV-2179925_55	UniRef90_R7NRD0	328.0	0	Manganese containing catalase	N/A
eggNOG-mapper	UHGV-2179925_55	1105031.HMPREF1141_2503	258.0	0	PFAM Manganese containing catalase	N/A
Pfam	UHGV-2179925_55	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-2179925_55	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2179925	Yes	37,365	33	97	1
UHGV-1510450	No	35,067	34	91	1
UHGV-0093683	No	32,931	34	86	1
UHGV-1518052	No	32,731	34	85	1
UHGV-1548016	No	32,677	34	85	1
UHGV-0298023	No	31,166	34	81	1
UHGV-0177356	No	20,323	35	54	1
UHGV-0213207	No	20,299	35	53	1
UHGV-0004683	No	19,478	34	51	1
UHGV-1594203	No	17,922	34	47	1
UHGV-1682052	No	17,483	34	45	1
UHGV-1612843	No	13,368	34	35	1
UHGV-1615642	No	13,186	34	34	1
UHGV-0104684	No	12,595	35	34	1