Viral OTU vOTU-013920

vOTU: vOTU-013920

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-013920
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lughvirus
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-00609 → vSUBGEN-00738 → vOTU-013920
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_C
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1548213
Biosample ID	SAMN06112012
Length	34,623 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	44
CDS Density	96.23%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1548213_2	K14059	146.1	4.1058e-43	int; integrase	N/A
PHROG	UHGV-1548213_2	phrog_1	133.0	2.8e-39	integrase	integration and excision
UniRef90	UHGV-1548213_2	UniRef90_A0A2A7AII9	763.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1548213_2	748224.HMPREF9436_03382	327.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1548213_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1548213_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1548213_2	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1548213_3	641112.ACOK01000103_gene519	64.7	0.000000000389	N/A	N/A
KOfam	UHGV-1548213_4	K01356	151.6	8.40779e-45	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1548213_4	phrog_4	122.3	5e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-1548213_4	UniRef90_A0A2A7AIG0	466.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-1548213_4	748224.HMPREF9436_01793	154.0	2.8026e-44	N/A	N/A
Pfam	UHGV-1548213_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1548213_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1548213_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1548213_4	PF00717,PF12844,MF_00015,TIGR00498,TIGR03070,COG1974,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_5	phrog_8	53.7	0.0000000000000054	transcriptional regulator	transcription regulation
UniRef90	UHGV-1548213_5	UniRef90_A0A2A7AI45	130.0	1.55e-38	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1548213_5	445335.CBN_3090	50.1	0.000000869	Helix-turn-helix domain	N/A
Pfam	UHGV-1548213_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1548213_5	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1548213_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1548213_6	UniRef90_A0A2A7BGV7	83.6	1.95e-19	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1548213_6	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_7	phrog_32852	92.7	2.1e-27	N/A	unknown function
structural_annotation	UHGV-1548213_8	PF12270,NF040944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1548213_10	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_11	phrog_1733	62.8	1.2e-18	N/A	unknown function
UniRef90	UHGV-1548213_11	UniRef90_UPI00196846D9	302.0	0	cell envelope integrity protein TolA	N/A
eggNOG-mapper	UHGV-1548213_11	665956.HMPREF1032_03597	189.0	0	DNA binding	N/A
COG	UHGV-1548213_11	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-1548213_12	K03546	47.5	0.00000000000017	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1548213_12	phrog_1499	457.8	0	N/A	unknown function
UniRef90	UHGV-1548213_12	UniRef90_A0A2A7AIJ9	738.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-1548213_12	1235798.C817_04766	474.0	0	AAA ATPase domain	N/A
Pfam	UHGV-1548213_12	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1548213_12	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1548213_12	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_13	phrog_124	227.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1548213_13	UniRef90_UPI00122C2B12	593.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1548213_13	645991.Sgly_0321	355.0	0	AAA domain	N/A
Pfam	UHGV-1548213_13	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1548213_13	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_14	phrog_2698	198.1	0	N/A	unknown function
UniRef90	UHGV-1548213_14	UniRef90_A0A291T9B6	330.0	0	N/A	N/A
eggNOG-mapper	UHGV-1548213_14	394503.Ccel_3308	127.0	2.2e-35	N/A	N/A
structural_annotation	UHGV-1548213_14	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-1548213_15	K17677	345.7	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1548213_15	phrog_16	273.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1548213_15	UniRef90_A0A1Q6JIT4	1040.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1548213_15	610130.Closa_1369	763.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-1548213_15	mREase_IV_00005	138.3	7.20001e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1548213_15	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1548213_15	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1548213_15	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1548213_15	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-1548213_16	K07505	376.9	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1548213_16	phrog_2597	1107.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1548213_16	UniRef90_A0A2A7AI73	1490.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1548213_16	999413.HMPREF1094_00232	861.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1548213_16	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1548213_16	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1548213_16	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1548213_16	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1548213_17	K01160	47.7	0.00000000000044	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1548213_17	phrog_140	86.1	4.6e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1548213_17	UniRef90_UPI00122CFAB3	256.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1548213_17	478749.BRYFOR_07588	140.0	6.32e-41	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1548213_17	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1548213_17	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1548213_17	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_18	phrog_36	76.2	5.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1548213_18	UniRef90_A0A3E2U224	142.0	7.20001e-41	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1548213_18	748224.HMPREF9436_01463	137.0	1.14e-39	N/A	N/A
structural_annotation	UHGV-1548213_18	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_19	phrog_2412	86.0	4.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1548213_19	742738.HMPREF9460_02504	117.0	3.51e-32	N/A	N/A
KOfam	UHGV-1548213_20	K06909	82.1	7.5e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1548213_20	phrog_2	111.5	1.2e-32	terminase large subunit	head and packaging
UniRef90	UHGV-1548213_20	UniRef90_A0A844EGH8	743.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1548213_20	1449050.JNLE01000003_gene3895	396.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1548213_20	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1548213_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1548213_20	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_21	phrog_533	267.7	0	portal protein	head and packaging
UniRef90	UHGV-1548213_21	UniRef90_A0A7G9WF85	368.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1548213_21	718252.FP2_06700	868.0	0	N/A	N/A
structural_annotation	UHGV-1548213_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_22	phrog_581	350.0	0	minor head protein	head and packaging
UniRef90	UHGV-1548213_22	UniRef90_A0A2K9V3K1	1113.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1548213_22	718252.FP2_06690	625.0	0	N/A	N/A
Pfam	UHGV-1548213_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1548213_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1548213_22	PF06152,PF07737,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_24	phrog_3675	113.8	6.3e-34	N/A	unknown function
UniRef90	UHGV-1548213_24	UniRef90_A0A2A7AIK7	213.0	0	Dihydrolipoyl dehydrogenase	N/A
eggNOG-mapper	UHGV-1548213_24	1122173.AXVL01000018_gene435	86.7	9.92e-21	YjcQ protein	N/A
Pfam	UHGV-1548213_24	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1548213_24	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_25	phrog_194	55.8	5.8e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-1548213_25	UniRef90_E6U604	142.0	1.1e-39	Minor structural GP20 protein	N/A
eggNOG-mapper	UHGV-1548213_25	663278.Ethha_0497	143.0	4.60004e-41	N/A	N/A
Pfam	UHGV-1548213_25	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1548213_25	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_26	phrog_10	184.5	0	major head protein	head and packaging
UniRef90	UHGV-1548213_26	UniRef90_A0A2A7AII3	607.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1548213_26	1120998.AUFC01000030_gene2236	403.0	0	Phage capsid family	N/A
Pfam	UHGV-1548213_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1548213_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1548213_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1548213_26	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_27	phrog_541	80.4	2e-23	head-tail adaptor	connector
PHROG	UHGV-1548213_28	phrog_3366	94.5	1.1e-27	N/A	unknown function
structural_annotation	UHGV-1548213_28	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_29	phrog_556	92.0	4.6e-27	minor head protein	head and packaging
UniRef90	UHGV-1548213_29	UniRef90_UPI0016528549	234.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1548213_29	718252.FP2_06630	220.0	0	Minor capsid protein	N/A
Pfam	UHGV-1548213_29	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1548213_29	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_30	phrog_3266	141.8	2.10055e-42	tail completion	connector
UniRef90	UHGV-1548213_30	UniRef90_UPI001178914F	79.7	3.76e-16	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1548213_30	718252.FP2_06620	253.0	0	N/A	N/A
structural_annotation	UHGV-1548213_30	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_31	phrog_820	102.4	3.4e-30	major tail protein	tail
eggNOG-mapper	UHGV-1548213_31	718252.FP2_06610	263.0	0	N/A	N/A
structural_annotation	UHGV-1548213_31	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_32	phrog_4450	118.9	3e-35	N/A	unknown function
Pfam	UHGV-1548213_32	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-1548213_32	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_33	phrog_706	129.8	1.9e-38	N/A	unknown function
UniRef90	UHGV-1548213_33	UniRef90_E2ZNP9	190.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1548213_33	748224.HMPREF9436_03328	190.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1548213_33	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1548213_33	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_34	phrog_28775	1250.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1548213_34	UniRef90_A0A291T8F4	1492.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1548213_34	411470.RUMGNA_02228	196.0	0	tape measure	N/A
Pfam	UHGV-1548213_34	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1548213_34	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1548213_34	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1548213_34	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_35	phrog_36410	65.2	8.9e-19	N/A	unknown function
UniRef90	UHGV-1548213_35	UniRef90_UPI00130E98E0	324.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1548213_35	748224.HMPREF9436_03325	276.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1548213_35	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_36	phrog_538	205.6	0	minor tail protein	tail
UniRef90	UHGV-1548213_36	UniRef90_UPI001899858F	115.0	1.02e-25	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1548213_36	748224.HMPREF9436_03324	441.0	0	N/A	N/A
Pfam	UHGV-1548213_36	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1548213_36	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_37	phrog_9534	472.3	0	head protein	head and packaging
eggNOG-mapper	UHGV-1548213_37	748224.HMPREF9436_03323	185.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1548213_37	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_39	phrog_28526	102.0	2.3e-30	N/A	unknown function
UniRef90	UHGV-1548213_39	UniRef90_A0A2A7AIE2	109.0	2.66e-30	Antitoxin	N/A
eggNOG-mapper	UHGV-1548213_39	411462.DORLON_00769	77.8	1.15e-18	N/A	N/A
Pfam	UHGV-1548213_39	PF04255	N/A	N/A	N/A	DUF433
KOfam	UHGV-1548213_41	K07273	172.6	0	acm; lysozyme	N/A
PHROG	UHGV-1548213_41	phrog_291	124.0	1.5e-36	endolysin	lysis
UniRef90	UHGV-1548213_41	UniRef90_A0A173W4B0	307.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1548213_41	411483.FAEPRAA2165_00002	284.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1548213_41	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1548213_41	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1548213_41	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1548213_43	phrog_4105	90.5	1.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1548213_43	718252.FP2_06480	165.0	0	N/A	N/A
PHROG	UHGV-1548213_44	phrog_263	83.4	1.8e-24	holin	lysis
UniRef90	UHGV-1548213_44	UniRef90_A0A2A7AI87	171.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1548213_44	718252.FP2_06470	101.0	5.6e-27	SPP1 phage holin	N/A
Pfam	UHGV-1548213_44	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1548213_44	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1548213_44	PF04688,TIGR01592	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1548213	Yes	34,623	60	100	1
UHGV-2196334	No	45,271	56	100	1
UHGV-0373226	No	28,472	61	82	1