Viral OTU vOTU-014370

vOTU: vOTU-014370

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-014370
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00671 → vGENUS-06045 → vSUBGEN-20859 → vOTU-014370
Host Lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0184535
Biosample ID	N/A
Length	39,757 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	66
CDS Density	92.36%
tRNA Count	3
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0184535_1	K14059	231.0	0	int; integrase	N/A
PHROG	UHGV-0184535_1	phrog_1	195.8	0	integrase	integration and excision
UniRef90	UHGV-0184535_1	UniRef90_UPI0015C5C81A	228.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0184535_1	428125.CLOLEP_02743	139.0	1.24e-34	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0184535_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0184535_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0184535_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0184535_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_3	phrog_87	66.8	2.7e-19	metallo-protease	other
UniRef90	UHGV-0184535_3	UniRef90_R5PN39	240.0	0	N/A	N/A
eggNOG-mapper	UHGV-0184535_3	457421.CBFG_03224	75.1	0.00000000000000434	N/A	N/A
Pfam	UHGV-0184535_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0184535_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0184535_3	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_4	K22299	57.7	2.8e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0184535_4	phrog_8	81.5	1.4e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0184535_4	UniRef90_A0A1Q6K3F1	107.0	7.8e-28	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0184535_4	350688.Clos_1821	67.4	0.000000000000606	helix-turn-helix	N/A
PADLOC	UHGV-0184535_4	retron_type_VI_hth_cluster2_1	42.1	0.000000000019	N/A	Retron
Pfam	UHGV-0184535_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0184535_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0184535_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_5	K07729	52.8	0.0000000000000081	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0184535_5	phrog_3	44.2	0.0000000000066	transcriptional repressor	transcription regulation
UniRef90	UHGV-0184535_5	UniRef90_A0A1Q6K3M2	97.4	3.73e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0184535_5	755731.Clo1100_0531	56.2	0.00000000125	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0184535_5	retron_type_VI_hth_cluster2_1	44.7	0.0000000000037	N/A	Retron
Pfam	UHGV-0184535_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0184535_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_6	phrog_4621	43.1	0.0000000000055	N/A	unknown function
eggNOG-mapper	UHGV-0184535_6	1196322.A370_02090	57.0	0.000000000156	N/A	N/A
PHROG	UHGV-0184535_7	phrog_3292	57.3	2.7e-16	N/A	unknown function
UniRef90	UHGV-0184535_7	UniRef90_UPI000DE379A1	77.0	3.3e-17	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0184535_7	1121342.AUCO01000012_gene1704	70.5	0.00000000000000221	KTSC domain	N/A
Pfam	UHGV-0184535_7	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0184535_7	COG0433	N/A	N/A	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	N/A
structural_annotation	UHGV-0184535_7	PF13619	N/A	N/A	N/A	N/A
Pfam	UHGV-0184535_8	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0184535_8	PF09035,NF040990,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_12	K06284	72.3	6.7e-21	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0184535_12	phrog_4681	66.8	1.8e-19	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0184535_12	UniRef90_UPI001A9EF159	70.5	0.000000000000038	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0184535_12	1145276.T479_16390	70.1	0.00000000000000794	Transition state regulator Abh	N/A
Pfam	UHGV-0184535_12	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0184535_12	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0184535_12	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0184535_12	PF04014,TIGR01439,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_14	phrog_674	153.2	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0184535_14	UniRef90_UPI000553F60F	170.0	0	N/A	N/A
eggNOG-mapper	UHGV-0184535_14	665956.HMPREF1032_03103	177.0	0	N/A	N/A
Pfam	UHGV-0184535_14	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0184535_14	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_15	phrog_2760	194.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184535_15	UniRef90_R7FH02	437.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0184535_15	1031288.AXAA01000044_gene1973	193.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-0184535_15	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0184535_15	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0184535_15	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0184535_15	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_16	phrog_392	141.8	5.20022e-42	metal-dependent hydrolase	other
UniRef90	UHGV-0184535_16	UniRef90_R5PYB3	421.0	0	Metallo-beta-lactamase domain protein	N/A
eggNOG-mapper	UHGV-0184535_16	665956.HMPREF1032_03101	191.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0184535_16	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0184535_16	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0184535_16	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_17	phrog_72	65.1	1.2e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184535_17	UniRef90_A0A8D9PDS2	109.0	4.27e-27	NinB protein	N/A
eggNOG-mapper	UHGV-0184535_17	508419.F8J186_9CAUD	116.0	1.42e-30	N/A	N/A
structural_annotation	UHGV-0184535_17	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_18	phrog_7370	41.8	0.000000000016	HNH endonuclease	DNA, RNA and nucleotide metabolism
PHROG	UHGV-0184535_20	phrog_2514	110.8	1.2e-32	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184535_20	UniRef90_UPI000445EF54	102.0	1.16e-24	DnaD domain-containing protein	N/A
eggNOG-mapper	UHGV-0184535_20	1111134.HMPREF1253_1417	121.0	1.79e-32	Transcriptional regulator	N/A
COG	UHGV-0184535_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0184535_20	PF09681,NF006814,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_22	phrog_1123	56.3	4.6e-16	N/A	unknown function
UniRef90	UHGV-0184535_22	UniRef90_A0A7U3NJT7	68.9	0.000000000000993	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0184535_22	445972.ANACOL_03346	65.5	0.0000000000019	N/A	N/A
structural_annotation	UHGV-0184535_22	PF02002,TIGR03433,COG1695	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_23	K06940	48.3	0.00000000000019	N/A	N/A
PHROG	UHGV-0184535_23	phrog_32498	89.3	3.4e-26	N/A	unknown function
UniRef90	UHGV-0184535_23	UniRef90_UPI001570B1E1	69.3	0.00000000000176	YkgJ family cysteine cluster protein	N/A
eggNOG-mapper	UHGV-0184535_23	397290.C810_01479	67.4	0.00000000000172	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-0184535_23	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
UniRef90	UHGV-0184535_24	UniRef90_UPI0018A090A4	59.7	0.000000000862	demethylase	N/A
structural_annotation	UHGV-0184535_25	PF15188	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_26	K01160	54.5	0.0000000000000031	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0184535_26	phrog_140	114.2	9.9e-34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184535_26	UniRef90_UPI001C9B639A	103.0	9.62e-26	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0184535_26	545697.HMPREF0216_02819	93.6	1.77e-22	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0184535_26	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0184535_26	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0184535_26	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
Pfam	UHGV-0184535_27	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-0184535_29	PF09871,TIGR00739	N/A	N/A	N/A	N/A
Pfam	UHGV-0184535_31	PF09643	N/A	N/A	YopX protein	YopX
PHROG	UHGV-0184535_36	phrog_1238	55.0	0.0000000000000013	phosphoheptose isomerase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0184535_36	UniRef90_A0A7Z0EIA5	79.7	1.18e-16	Rhodanese-related sulfurtransferase	N/A
eggNOG-mapper	UHGV-0184535_36	33898.JRHJ01000076_gene397	82.0	7.6e-18	N/A	N/A
structural_annotation	UHGV-0184535_36	TIGR01689	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_37	phrog_419	109.2	3.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0184535_37	457405.FSDG_01548	98.6	1.43e-25	N/A	N/A
structural_annotation	UHGV-0184535_42	PF05263,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0184535_45	1329516.JPST01000014_gene656	50.1	0.00000877	N/A	N/A
structural_annotation	UHGV-0184535_45	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_46	K06909	142.6	3.39955e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0184535_46	phrog_979	155.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0184535_46	UniRef90_A0A0M2NDA4	533.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0184535_46	1232449.BAHV02000016_gene1824	530.0	0	N/A	N/A
Pfam	UHGV-0184535_46	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0184535_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0184535_46	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_48	phrog_156	146.8	1.20512e-43	portal protein	head and packaging
UniRef90	UHGV-0184535_48	UniRef90_A0A8D9UHD1	354.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0184535_48	1121091.AUMP01000003_gene2583	283.0	0	N/A	N/A
structural_annotation	UHGV-0184535_48	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_50	phrog_1357	226.8	0	major head protein	head and packaging
UniRef90	UHGV-0184535_50	UniRef90_A0A8D9UHB3	282.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0184535_50	696281.Desru_1092	252.0	0	N/A	N/A
NCBIFam	UHGV-0184535_50	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0184535_50	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0184535_52	693746.OBV_23880	60.8	0.00000000303	N/A	N/A
PHROG	UHGV-0184535_53	phrog_3287	111.2	9.5e-33	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0184535_53	1232449.BAHV02000016_gene1816	329.0	0	N/A	N/A
structural_annotation	UHGV-0184535_53	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0184535_54	1121935.AQXX01000130_gene2403	64.3	0.0000000602	Fibronectin type 3 domain	N/A
COG	UHGV-0184535_54	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0184535_55	phrog_372	263.7	0	tail protein	tail
UniRef90	UHGV-0184535_55	UniRef90_UPI0011075AE0	117.0	9.15e-24	N/A	N/A
eggNOG-mapper	UHGV-0184535_55	1035189.HMPREF9954_0321	112.0	6.69e-23	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0184535_55	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0184535_55	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0184535_55	PF05895,PF00386,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
PHROG	UHGV-0184535_58	phrog_13256	52.1	0.0000000000000057	N/A	unknown function
eggNOG-mapper	UHGV-0184535_58	1160721.RBI_II00522	55.5	0.00000000142	N/A	N/A
KOfam	UHGV-0184535_59	K01447	82.0	8.3e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0184535_59	phrog_35436	137.9	5.90003e-41	amidase	lysis
UniRef90	UHGV-0184535_59	UniRef90_A0A3D1RJG1	167.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0184535_59	748727.CLJU_c32580	157.0	7.00649e-45	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0184535_59	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0184535_59	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0184535_59	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0184535_59	PF01510,PF18342,MF_04111,NF008758,COG3023,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_60	K22409	45.9	0.00000000000058	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0184535_60	phrog_4602	42.0	0.000000000018	transglycosylase	other
eggNOG-mapper	UHGV-0184535_60	1242864.D187_002080	62.0	0.0000000351	Lysin motif	N/A
Pfam	UHGV-0184535_60	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0184535_60	COG1388	N/A	N/A	LysM repeat	N/A
eggNOG-mapper	UHGV-0184535_61	1408437.JNJN01000060_gene452	364.0	0	heme binding	N/A
Pfam	UHGV-0184535_61	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
COG	UHGV-0184535_61	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
PHROG	UHGV-0184535_62	phrog_1281	84.9	4e-25	N/A	unknown function
UniRef90	UHGV-0184535_62	UniRef90_UPI001D14EC7B	119.0	2.16e-31	N/A	N/A
eggNOG-mapper	UHGV-0184535_62	525378.HMPREF0793_0191	92.4	2.1e-21	N/A	N/A
Pfam	UHGV-0184535_62	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0184535_62	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0184535_62	PF13274,COG3600	N/A	N/A	N/A	N/A
KOfam	UHGV-0184535_65	K19449	59.1	8.2e-17	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	N/A
PHROG	UHGV-0184535_65	phrog_3	51.8	0.000000000000034	transcriptional repressor	transcription regulation
UniRef90	UHGV-0184535_65	UniRef90_R5YVI1	129.0	1.35e-36	HTH-type transcriptional regulator SinR	N/A
eggNOG-mapper	UHGV-0184535_65	86416.Clopa_3404	61.6	0.000000000121	helix-turn-helix	N/A
PADLOC	UHGV-0184535_65	retron_type_VI_hth_cluster2_1	54.9	0.0000000000000023	N/A	Retron
Pfam	UHGV-0184535_65	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-0184535_65	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
COG	UHGV-0184535_65	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0184535_65	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0184535	Yes	39,757	30	100	1
UHGV-2027477	No	41,636	30	100	1
UHGV-0077589	No	36,306	30	95	1