Viral OTU vOTU-016651

vOTU: vOTU-016651

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-016651
Number of Genomes	12
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-07605 → vOTU-016651
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter lactaris
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2158343
Biosample ID	N/A
Length	33,421 bps
CheckV Completeness	74.13% (Medium-quality)
CDS Count	44
CDS Density	92.70%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 74.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2158343_1	K14059	175.9	0	int; integrase	N/A
PHROG	UHGV-2158343_1	phrog_1	178.6	0	integrase	integration and excision
UniRef90	UHGV-2158343_1	UniRef90_A0A414P9D4	548.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-2158343_1	1280698.AUJS01000007_gene999	331.0	0	Phage integrase family	N/A
Pfam	UHGV-2158343_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2158343_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2158343_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_2	phrog_1847	507.9	0	N/A	unknown function
UniRef90	UHGV-2158343_2	UniRef90_A0A564SD82	648.0	0	T5orf172 domain protein	N/A
eggNOG-mapper	UHGV-2158343_2	1235792.C808_05258	498.0	0	N/A	N/A
Pfam	UHGV-2158343_2	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-2158343_2	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-2158343_2	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-2158343_2	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
KOfam	UHGV-2158343_3	K01356	159.2	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2158343_3	phrog_4	140.3	1.40004e-41	transcriptional repressor	transcription regulation
UniRef90	UHGV-2158343_3	UniRef90_A0A3E2TSF0	314.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2158343_3	411490.ANACAC_00815	296.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-2158343_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-2158343_3	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-2158343_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2158343_3	PF01381,PF00717,MF_00015,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2158343_4	K07729	44.9	0.0000000000024	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-2158343_4	UniRef90_A0A3E2TSC3	137.0	1.36e-40	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2158343_4	411469.EUBHAL_01993	122.0	1.34e-35	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-2158343_4	retron_type_VI_hth_cluster2_1	42.2	0.000000000023	N/A	Retron
Pfam	UHGV-2158343_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2158343_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2158343_4	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2158343_5	1095750.HMPREF9970_1010	56.2	0.000000000635	N/A	N/A
PHROG	UHGV-2158343_6	phrog_3240	100.1	1.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-2158343_6	1158607.UAU_01711	98.6	3.65e-26	N/A	N/A
PHROG	UHGV-2158343_9	phrog_26484	48.1	0.00000000000019	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_9	UniRef90_A0A2N5PB10	134.0	1.15e-39	PC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2158343_9	1229517.AMFD01000013_gene1357	70.9	0.00000000000000233	Transcriptional Coactivator p15 (PC4)	N/A
Pfam	UHGV-2158343_9	PF02229	N/A	N/A	Transcriptional Coactivator p15 (PC4)	PC4
COG	UHGV-2158343_9	COG4443	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2158343_9	COG4443	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_10	phrog_22695	78.0	6.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-2158343_10	1235799.C818_04196	78.6	1.52e-16	N/A	N/A
PHROG	UHGV-2158343_11	phrog_69	344.8	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_11	UniRef90_UPI000C79535F	706.0	0	N/A	N/A
eggNOG-mapper	UHGV-2158343_11	1235799.C818_04197	491.0	0	N/A	N/A
Pfam	UHGV-2158343_11	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-2158343_11	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-2158343_11	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_12	phrog_112	207.0	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_12	UniRef90_UPI0015D1A9B3	377.0	0	N/A	N/A
eggNOG-mapper	UHGV-2158343_12	1235799.C818_04198	319.0	0	N/A	N/A
Pfam	UHGV-2158343_12	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-2158343_12	PF10991,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-2158343_13	K02334	843.4	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-2158343_13	phrog_17	397.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_13	UniRef90_A0A174BA55	1292.0	0	DNA polymerase I, thermostable	N/A
eggNOG-mapper	UHGV-2158343_13	1235799.C818_04199	996.0	0	DNA polymerase A domain	N/A
Pfam	UHGV-2158343_13	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-2158343_13	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-2158343_13	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_14	phrog_256	1049.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_14	UniRef90_A0A174B9G0	1595.0	0	Predicted P-loop ATPase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-2158343_14	1235799.C818_04200	1285.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-2158343_14	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-2158343_14	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-2158343_14	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_15	phrog_93	58.6	9.2e-17	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_15	UniRef90_R6ST09	172.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-2158343_15	1235799.C818_04201	165.0	0	VRR_NUC	N/A
structural_annotation	UHGV-2158343_15	PF01870,MF_01490,NF002585,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-2158343_16	K14440	125.3	9.1e-38	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-2158343_16	phrog_62	423.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2158343_16	UniRef90_A0A2N5PB08	816.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-2158343_16	1235799.C818_04202	793.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-2158343_16	DpdE_00010	87.7	1.3e-25	DpdE	DPD
Pfam	UHGV-2158343_16	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-2158343_16	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2158343_16	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-2158343_16	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-2158343_19	cluster_12858	48.5	0.0000000000706	NA	N/A
PHROG	UHGV-2158343_20	phrog_36	82.7	4.7e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-2158343_20	UniRef90_A0A373STV4	244.0	0	N/A	N/A
eggNOG-mapper	UHGV-2158343_20	411461.DORFOR_00754	150.0	1.82169e-44	sigma factor activity	N/A
COG	UHGV-2158343_20	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-2158343_20	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_22	phrog_1758	95.8	3.5e-28	acetyltransferase	other
UniRef90	UHGV-2158343_22	UniRef90_A0A239X206	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-2158343_22	1336234.JAGN01000004_gene506	194.0	0	acetyltransferase	N/A
COG	UHGV-2158343_22	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-2158343_22	PF13673,MF_02210,NF000360,COG2153	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_23	phrog_509	280.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-2158343_23	UniRef90_UPI001D04D642	426.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-2158343_23	1449050.JNLE01000003_gene3896	247.0	0	DNA packaging	N/A
Pfam	UHGV-2158343_23	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-2158343_23	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-2158343_23	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2158343_23	NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-2158343_24	K06909	339.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2158343_24	phrog_3717	148.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2158343_24	UniRef90_UPI001D051132	860.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2158343_24	610130.Closa_1390	718.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-2158343_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2158343_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2158343_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2158343_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2158343_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_25	phrog_64	375.4	0	portal protein	head and packaging
UniRef90	UHGV-2158343_25	UniRef90_UPI001D03DB0E	991.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-2158343_25	1121335.Clst_0386	518.0	0	phage portal protein, SPP1	N/A
Pfam	UHGV-2158343_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-2158343_25	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-2158343_25	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_26	phrog_4728	233.7	0	head morphogenesis	head and packaging
UniRef90	UHGV-2158343_26	UniRef90_UPI001D048EED	1250.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2158343_26	411468.CLOSCI_00291	326.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-2158343_26	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-2158343_26	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-2158343_26	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_29	phrog_194	132.1	4.1e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-2158343_29	UniRef90_UPI000C76E206	282.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2158343_29	411468.CLOSCI_00287	110.0	2.08e-27	Phage minor structural protein GP20	N/A
Pfam	UHGV-2158343_29	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2158343_29	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_30	phrog_267	136.0	2.29999e-40	major head protein	head and packaging
UniRef90	UHGV-2158343_30	UniRef90_A0A7V8IA85	355.0	0	Phage coat protein gp6	N/A
eggNOG-mapper	UHGV-2158343_30	1321778.HMPREF1982_03550	307.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-2158343_30	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_31	phrog_132	54.6	0.0000000000000018	head-tail adaptor	connector
UniRef90	UHGV-2158343_31	UniRef90_UPI001C3B0296	141.0	1.19993e-41	Phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-2158343_31	1540257.JQMW01000009_gene3373	48.9	0.00000427	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-2158343_31	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-2158343_31	PF05135	N/A	N/A	N/A	N/A
UniRef90	UHGV-2158343_32	UniRef90_A0A414P9G2	200.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-2158343_32	411468.CLOSCI_00284	71.6	0.00000000000000681	N/A	N/A
structural_annotation	UHGV-2158343_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_33	phrog_5	61.9	1.5e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-2158343_33	UniRef90_A0A414P9G4	271.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2158343_33	411468.CLOSCI_00283	156.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2158343_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-2158343_33	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-2158343_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2158343_34	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_35	phrog_2175	88.9	5.2e-26	protein with Ig domain	other
eggNOG-mapper	UHGV-2158343_35	411468.CLOSCI_00281	243.0	0	N/A	N/A
structural_annotation	UHGV-2158343_35	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2158343_36	PF16462	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2158343_37	411468.CLOSCI_00279	97.4	2.2e-25	N/A	N/A
PHROG	UHGV-2158343_38	phrog_1533	566.6	0	tail length tape measure protein	tail
UniRef90	UHGV-2158343_38	UniRef90_A0A414P9F7	1709.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2158343_38	411468.CLOSCI_00278	1036.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-2158343_38	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2158343_38	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2158343_38	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2158343_38	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_39	phrog_33	42.2	0.000000000015	distal tail protein Dit	tail
UniRef90	UHGV-2158343_39	UniRef90_A0A414P9H2	553.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2158343_39	411461.DORFOR_01176	265.0	0	N/A	N/A
structural_annotation	UHGV-2158343_39	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_40	phrog_538	211.6	0	minor tail protein	tail
UniRef90	UHGV-2158343_40	UniRef90_UPI001E2C8064	316.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-2158343_40	665950.HMPREF1025_02520	387.0	0	N/A	N/A
Pfam	UHGV-2158343_40	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-2158343_40	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2158343_41	phrog_13141	194.2	0	N/A	unknown function
UniRef90	UHGV-2158343_41	UniRef90_UPI001570499E	250.0	0	H-type lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-2158343_41	665950.HMPREF1025_02519	241.0	0	N/A	N/A
structural_annotation	UHGV-2158343_41	PF20747,PF08931	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2158343_42	1123237.Salmuc_01650	61.2	0.0000000000389	N/A	N/A
eggNOG-mapper	UHGV-2158343_44	742733.HMPREF9469_05016	60.5	0.00000000112	N/A	N/A
Pfam	UHGV-2158343_44	PF19789	N/A	N/A	N/A	DUF6273

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2158343	Yes	33,421	42	74	1
UHGV-1326758	No	35,321	42	78	1
UHGV-2035320	No	33,421	42	74	1
UHGV-2076287	No	33,421	42	74	1
UHGV-2160977	No	33,421	42	74	1
UHGV-2052398	No	33,178	42	74	1
UHGV-2153839	No	33,178	42	74	1
UHGV-0208994	No	30,278	43	67	1
UHGV-1267185	No	18,618	43	41	1
UHGV-1286570	No	16,563	40	40	1
UHGV-2106726	No	13,961	43	37	1
UHGV-2109531	No	13,126	44	29	1