Viral OTU vOTU-017580

vOTU: vOTU-017580

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-017580
Number of Genomes	7
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vOTU-017580
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2023347
Biosample ID	N/A
Length	30,342 bps
CheckV Completeness	87.10% (Medium-quality)
CDS Count	44
CDS Density	93.69%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2023347_1	K06400	75.2	9e-22	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2023347_1	phrog_95	78.1	9.8e-23	integrase	integration and excision
UniRef90	UHGV-2023347_1	UniRef90_A0A2H0SF92	59.3	0.0000000392	Recombinase family protein (Fragment)	N/A
eggNOG-mapper	UHGV-2023347_1	1123288.SOV_2c04060	63.5	0.000000000796	Resolvase, N terminal domain	N/A
Pfam	UHGV-2023347_1	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-2023347_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
PHROG	UHGV-2023347_2	phrog_1129	62.9	3.9e-18	holin	lysis
UniRef90	UHGV-2023347_2	UniRef90_A0A8J6J3M3	100.0	8.6e-26	Phage holin family protein	N/A
eggNOG-mapper	UHGV-2023347_2	742740.HMPREF9474_03522	98.2	8.56e-26	N/A	N/A
Pfam	UHGV-2023347_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2023347_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_3	phrog_1863	59.2	1.6e-17	N/A	unknown function
UniRef90	UHGV-2023347_3	UniRef90_UPI001F223E8B	68.2	0.000000000000329	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-2023347_3	1226322.HMPREF1545_04027	65.9	0.000000000000438	N/A	N/A
KOfam	UHGV-2023347_4	K01447	78.6	1.1e-22	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2023347_4	phrog_5182	159.6	0	endolysin	lysis
UniRef90	UHGV-2023347_4	UniRef90_R5AZE6	365.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-2023347_4	397288.C806_00777	233.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-2023347_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-2023347_4	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-2023347_4	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_5	K20846	66.8	1.9e-19	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-2023347_5	phrog_215	84.0	3.2e-24	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-2023347_5	203275.BFO_0575	82.4	0.000000000000162	Bacterial group 2 Ig-like protein	N/A
Pfam	UHGV-2023347_5	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-2023347_5	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2023347_5	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2023347_6	411471.SUBVAR_06929	295.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-2023347_6	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-2023347_7	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_8	phrog_6616	68.1	1.7e-20	tail protein	tail
structural_annotation	UHGV-2023347_8	PF13550,PF09931,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_9	phrog_1194	42.3	0.00000000001	N/A	unknown function
structural_annotation	UHGV-2023347_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_10	phrog_1535	110.4	0	tail length tape measure protein	tail
UniRef90	UHGV-2023347_10	UniRef90_A0A810PX76	123.0	1.39e-25	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2023347_10	1235797.C816_04182	202.0	0	SLT domain	N/A
COG	UHGV-2023347_10	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2023347_10	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_11	phrog_706	109.6	2.6e-32	N/A	unknown function
UniRef90	UHGV-2023347_11	UniRef90_UPI00164D7633	178.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2023347_11	693746.OBV_18170	171.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2023347_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2023347_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_12	phrog_11299	101.9	6e-30	N/A	unknown function
eggNOG-mapper	UHGV-2023347_12	1449050.JNLE01000003_gene3883	67.4	0.00000000000365	N/A	N/A
structural_annotation	UHGV-2023347_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_13	phrog_3099	86.8	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-2023347_13	693746.OBV_18150	224.0	0	N/A	N/A
structural_annotation	UHGV-2023347_13	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_14	phrog_3266	64.6	1.4e-18	tail completion	connector
eggNOG-mapper	UHGV-2023347_14	476272.RUMHYD_01781	116.0	6.17e-31	N/A	N/A
structural_annotation	UHGV-2023347_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_15	phrog_556	65.9	1.1e-19	minor head protein	head and packaging
UniRef90	UHGV-2023347_15	UniRef90_A0A1H7MNM8	117.0	1.14e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2023347_15	476272.RUMHYD_01780	115.0	5.99e-31	N/A	N/A
Pfam	UHGV-2023347_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2023347_15	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_16	phrog_3366	51.9	0.000000000000015	N/A	unknown function
structural_annotation	UHGV-2023347_16	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_17	phrog_541	70.2	2.8e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-2023347_17	476272.RUMHYD_01778	73.9	0.0000000000000156	N/A	N/A
PHROG	UHGV-2023347_18	phrog_267	54.8	0.0000000000000014	major head protein	head and packaging
eggNOG-mapper	UHGV-2023347_18	1235799.C818_04223	158.0	8.40779e-44	N/A	N/A
structural_annotation	UHGV-2023347_18	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_19	phrog_194	43.9	0.0000000000042	head scaffolding protein	head and packaging
UniRef90	UHGV-2023347_19	UniRef90_UPI001C0EBA51	129.0	6.04e-34	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2023347_19	1125725.HMPREF1325_1331	61.6	0.00000000317	Phage minor structural protein GP20	N/A
Pfam	UHGV-2023347_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2023347_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_20	phrog_15041	48.0	0.00000000000017	N/A	unknown function
PHROG	UHGV-2023347_21	phrog_581	243.5	0	minor head protein	head and packaging
UniRef90	UHGV-2023347_21	UniRef90_A0A3D4T830	351.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2023347_21	476272.RUMHYD_01761	226.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2023347_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2023347_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2023347_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_22	phrog_533	204.3	0	portal protein	head and packaging
UniRef90	UHGV-2023347_22	UniRef90_A0A1C6CDM8	340.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2023347_22	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-2023347_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_23	phrog_1233	95.2	7.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-2023347_23	1415774.U728_832	93.2	3.72e-23	N/A	N/A
structural_annotation	UHGV-2023347_23	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_24	K06909	396.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2023347_24	phrog_5653	147.0	5.60519e-44	terminase large subunit	head and packaging
UniRef90	UHGV-2023347_24	UniRef90_A0A416S378	637.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2023347_24	33035.JPJF01000106_gene3136	545.0	0	Terminase small subunit	N/A
Pfam	UHGV-2023347_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2023347_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2023347_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2023347_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2023347_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2023347_25	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_26	phrog_36	67.2	2.9e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-2023347_26	UniRef90_A0A7D6VSS6	64.3	0.000000000279	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-2023347_26	1294142.CINTURNW_1020	62.4	0.000000000255	N/A	N/A
Pfam	UHGV-2023347_26	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-2023347_26	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_27	phrog_3136	117.2	3.4e-35	N/A	unknown function
UniRef90	UHGV-2023347_27	UniRef90_UPI001C26B029	125.0	1.99e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-2023347_27	97139.C824_00742	58.5	0.0000000238	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-2023347_27	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-2023347_27	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_28	phrog_5781	69.3	5.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-2023347_28	573061.Clocel_3558	77.0	6.15e-16	N/A	N/A
Pfam	UHGV-2023347_28	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-2023347_28	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-2023347_28	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_29	K06223	229.1	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-2023347_29	phrog_56	174.3	0	DNA methyltransferase	other
UniRef90	UHGV-2023347_29	UniRef90_R9MCP5	305.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-2023347_29	1235799.C818_02654	305.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-2023347_29	MTase_II_00030	274.9	0	Type II methyltransferase	RM
Pfam	UHGV-2023347_29	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-2023347_29	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-2023347_29	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_30	K00558	224.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-2023347_30	phrog_116	255.8	0	DNA methyltransferase	other
UniRef90	UHGV-2023347_30	UniRef90_A0A350THX9	795.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-2023347_30	1121334.KB911073_gene1852	662.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-2023347_30	MTase_II_00020	94.2	5.4e-30	Type II methyltransferase	RM
Pfam	UHGV-2023347_30	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-2023347_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2023347_30	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_31	K03700	92.8	4.4e-27	recU; recombination protein U	N/A
PHROG	UHGV-2023347_31	phrog_843	140.3	6.39973e-42	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2023347_31	UniRef90_A0A1H0W5Y9	167.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-2023347_31	1203606.HMPREF1526_01884	156.0	5.60519e-45	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-2023347_31	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-2023347_31	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-2023347_31	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_32	phrog_3584	129.2	3.1e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2023347_32	411470.RUMGNA_02047	135.0	1.58e-35	N/A	N/A
structural_annotation	UHGV-2023347_32	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_35	K06284	125.5	2.5e-37	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-2023347_35	phrog_4681	105.7	1.6e-31	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-2023347_35	UniRef90_A0A841SSA0	110.0	4.64e-30	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-2023347_35	1157490.EL26_11905	109.0	2.83e-30	Antidote-toxin recognition MazE, bacterial antitoxin	N/A
Pfam	UHGV-2023347_35	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-2023347_35	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-2023347_35	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-2023347_35	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
Pfam	UHGV-2023347_37	PF10711	N/A	N/A	N/A	DUF2513
PHROG	UHGV-2023347_38	phrog_750	41.3	0.000000000015	N/A	unknown function
structural_annotation	UHGV-2023347_38	PF13835,NF040858	N/A	N/A	N/A	N/A
UniRef90	UHGV-2023347_40	UniRef90_A0A357TPS2	75.9	1.8e-16	DNA-binding protein	N/A
eggNOG-mapper	UHGV-2023347_40	1347392.CCEZ01000005_gene1206	53.9	0.0000000108	N/A	N/A
structural_annotation	UHGV-2023347_40	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-2023347_41	UniRef90_UPI001D0E690A	97.4	2.73e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2023347_41	1163671.JAGI01000002_gene3923	52.8	0.0000000215	N/A	N/A
structural_annotation	UHGV-2023347_41	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-2023347_42	K22300	61.6	1.7e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2023347_42	phrog_8	60.1	5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-2023347_42	UniRef90_K1TCM8	103.0	2.14e-26	Protein containing Helix-turn-helix type 3 domain protein	N/A
eggNOG-mapper	UHGV-2023347_42	1033744.CAEL01000030_gene1483	55.8	0.0000000635	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2023347_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2023347_42	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-2023347_42	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2023347_43	phrog_1914	105.2	1.8e-31	N/A	unknown function
UniRef90	UHGV-2023347_43	UniRef90_R6DVV5	238.0	0	Predicted Zn peptidase	N/A
eggNOG-mapper	UHGV-2023347_43	1160721.RBI_I01604	148.0	1.45034e-42	N/A	N/A
Pfam	UHGV-2023347_43	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2023347_43	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2023347_43	PF06114,COG2856	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2023347_44	PF18768,MF_02066,NF011886,COG5010	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2023347	Yes	30,342	57	87	1
UHGV-0075485	No	29,884	57	86	1
UHGV-1419338	No	20,949	58	60	1
UHGV-0189539	No	18,147	57	52	1
UHGV-1796527	No	16,711	57	48	1
UHGV-0146840	No	16,230	57	47	1
UHGV-1735631	No	15,290	58	44	1