Viral OTU vOTU-018564

vOTU: vOTU-018564

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-018564
Number of Genomes	9
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00016 → vSUBFAM-00039 → vGENUS-09725 → vOTU-018564
Host Lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0209791
Biosample ID	SAMN11031380
Length	30,958 bps
CheckV Completeness	77.49% (Medium-quality)
CDS Count	40
CDS Density	89.58%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0209791_1	phrog_1055	165.5	0	restriction alleviation ral	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209791_1	UniRef90_P03703	147.0	4.2039e-45	Restriction inhibitor protein ral	N/A
eggNOG-mapper	UHGV-0209791_1	469008.B21_00718	147.0	1.4013e-45	Antirestriction protein Ral	N/A
Pfam	UHGV-0209791_1	PF11058	N/A	N/A	Antirestriction protein Ral	Ral
dbAPIS	UHGV-0209791_1	APIS009	N/A	N/A	Ral of phage λ can activate the activity of the MTase and thereby accelerate protection of the phage DNA.	N/A
structural_annotation	UHGV-0209791_1	PF11058	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_2	phrog_5632	220.5	0	Nun-like transcription termination factor	transcription regulation
UniRef90	UHGV-0209791_2	UniRef90_P18683	217.0	0	Transcription termination factor nun	N/A
eggNOG-mapper	UHGV-0209791_2	906668.G8C7L7_9CAUD	217.0	0	N/A	N/A
KOfam	UHGV-0209791_3	K22300	91.0	1.5e-26	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0209791_3	phrog_4	165.0	0	transcriptional repressor	transcription regulation
UniRef90	UHGV-0209791_3	UniRef90_P69202	414.0	0	Repressor protein C2	N/A
eggNOG-mapper	UHGV-0209791_3	469008.B21_04294	437.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0209791_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0209791_3	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0209791_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0209791_3	PF00717,PF01381,MF_00015,NF007257,NF007621,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_4	K22302	84.6	8.6e-25	dicC; transcriptional repressor of cell division inhibition gene dicB	N/A
PHROG	UHGV-0209791_4	phrog_409	79.1	4.7e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0209791_4	UniRef90_P09964	119.0	4.8e-34	Regulatory protein cro	N/A
eggNOG-mapper	UHGV-0209791_4	754331.AEME01000001_gene3596	120.0	2.81e-35	DNA-binding transcriptional regulator Cro	N/A
Pfam	UHGV-0209791_4	PF14549	N/A	N/A	DNA-binding transcriptional regulator Cro	P22_Cro
COG	UHGV-0209791_4	COG4197	N/A	N/A	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily	N/A
structural_annotation	UHGV-0209791_4	PF14549,NF007282,COG4197	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_5	phrog_191	139.2	8.80015e-42	CII-like transcriptional activator	transcription regulation
UniRef90	UHGV-0209791_5	UniRef90_E3PHH4	177.0	0	Transcriptional activator protein	N/A
eggNOG-mapper	UHGV-0209791_5	101570.Q5G8T2_9CAUD	161.0	0	Bacteriophage CII protein	N/A
Pfam	UHGV-0209791_5	PF05269	N/A	N/A	Bacteriophage CII protein	Phage_CII
structural_annotation	UHGV-0209791_5	PF05269	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_6	phrog_1331	130.4	2.9e-39	N/A	unknown function
UniRef90	UHGV-0209791_6	UniRef90_A0A0J2A1R9	105.0	6.16e-29	N/A	N/A
eggNOG-mapper	UHGV-0209791_6	10761.Q716D4_BPSFV	105.0	1.03e-29	N/A	N/A
PHROG	UHGV-0209791_7	phrog_345	281.2	0	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209791_7	UniRef90_A0A8D5QLK2	537.0	0	Phage_rep_O domain-containing protein	N/A
eggNOG-mapper	UHGV-0209791_7	1127357.I1TEG0_9CAUD	540.0	0	DNA replication	N/A
Pfam	UHGV-0209791_7	PF04492	N/A	N/A	Bacteriophage replication protein O	Phage_rep_O
NCBIFam	UHGV-0209791_7	TIGR01610.1	N/A	N/A	phage replication protein O, N-terminal domain	N/A
structural_annotation	UHGV-0209791_7	PF04492,TIGR01610,COG3388	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_8	K02314	362.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0209791_8	phrog_19	485.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209791_8	UniRef90_A0A2V2J552	872.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0209791_8	37554.Q9MCP7_BPHK7	874.0	0	DNA helicase activity	N/A
Pfam	UHGV-0209791_8	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0209791_8	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
structural_annotation	UHGV-0209791_8	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_9	phrog_1165	122.3	1.7e-36	N/A	unknown function
UniRef90	UHGV-0209791_9	UniRef90_A0A0P7PW10	93.6	6.4e-24	Membrane protein	N/A
eggNOG-mapper	UHGV-0209791_9	906668.G8C7M4_9CAUD	115.0	2.17e-33	N/A	N/A
PHROG	UHGV-0209791_10	phrog_5903	251.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0209791_10	1168549.I6RSP8_9CAUD	227.0	0	N/A	N/A
PHROG	UHGV-0209791_11	phrog_29435	192.7	0	N/A	unknown function
PHROG	UHGV-0209791_12	phrog_72	189.0	0	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209791_12	UniRef90_P03765	293.0	0	Protein ninB	N/A
eggNOG-mapper	UHGV-0209791_12	10710.NINB_LAMBD	293.0	0	NinB protein	N/A
Pfam	UHGV-0209791_12	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0209791_12	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_13	K00390	44.0	0.0000000000018	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0209791_13	phrog_33262	317.6	0	N/A	unknown function
UniRef90	UHGV-0209791_13	UniRef90_UPI0011226670	535.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0209791_13	10710.Y290_LAMBD	617.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0209791_13	SspD_00001	49.5	0.000000000000013	SspD	SSP
Pfam	UHGV-0209791_13	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
structural_annotation	UHGV-0209791_13	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_14	phrog_2638	189.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0209791_14	28152.DJ57_2563	94.7	2.8e-23	N/A	N/A
PHROG	UHGV-0209791_15	phrog_7109	155.6	0	N/A	unknown function
UniRef90	UHGV-0209791_15	UniRef90_Q8HAF2	197.0	0	Orf-136	N/A
eggNOG-mapper	UHGV-0209791_15	1127357.I1TEH2_9CAUD	201.0	0	N/A	N/A
Pfam	UHGV-0209791_15	PF07102	N/A	N/A	Putative nuclease YbcO	YbcO
structural_annotation	UHGV-0209791_15	PF07102	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_16	K01160	116.1	3.9e-34	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0209791_16	phrog_34	130.9	5.8e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209791_16	UniRef90_A0A0F3VSC0	236.0	0	Crossover junction endodeoxyribonuclease rusA	N/A
eggNOG-mapper	UHGV-0209791_16	1147147.K7P6Y4_9CAUD	238.0	0	magnesium ion binding	N/A
Pfam	UHGV-0209791_16	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0209791_16	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_17	phrog_943	309.3	0	anti-termination protein Q-like	transcription regulation
UniRef90	UHGV-0209791_17	UniRef90_D2A7X4	345.0	0	Q protein	N/A
eggNOG-mapper	UHGV-0209791_17	754331.AEME01000001_gene3586	348.0	0	N/A	N/A
Pfam	UHGV-0209791_17	PF06530	N/A	N/A	Phage antitermination protein Q	Phage_antitermQ
structural_annotation	UHGV-0209791_17	PF06530	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_18	phrog_9876	121.0	2e-36	holin	lysis
UniRef90	UHGV-0209791_18	UniRef90_P27360	147.0	7.00649e-45	Antiholin	N/A
eggNOG-mapper	UHGV-0209791_18	1225789.M1FN85_9CAUD	147.0	1.4013e-45	Pfam:Phage_holin_2_1	N/A
Pfam	UHGV-0209791_18	PF04971	N/A	N/A	Bacteriophage P21 holin S	Phage_holin_2_1
structural_annotation	UHGV-0209791_18	PF04971	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_19	K01185	147.4	1.20512e-43	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0209791_19	phrog_7	193.4	0	endolysin	lysis
UniRef90	UHGV-0209791_19	UniRef90_P78285	331.0	0	Lysozyme RrrD	N/A
eggNOG-mapper	UHGV-0209791_19	316407.85674690	331.0	0	Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity. Exhibits lytic activity against E.coli and S.typhi cell wall substrate	N/A
Pfam	UHGV-0209791_19	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-0209791_19	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
HAMAP	UHGV-0209791_19	MF_04136	N/A	N/A	SAR-endolysin	N/A
structural_annotation	UHGV-0209791_19	PF00959,MF_04110,COG3772	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_20	K14744	197.1	0	rzpD; prophage endopeptidase [EC:3.4.-.-]	N/A
PHROG	UHGV-0209791_20	phrog_13	238.1	0	Rz-like spanin	lysis
UniRef90	UHGV-0209791_20	UniRef90_Q9AZ06	266.0	0	Spanin, inner membrane subunit	N/A
eggNOG-mapper	UHGV-0209791_20	502347.ESCAB7627_3665	280.0	0	Bacteriophage Rz lysis protein	N/A
Pfam	UHGV-0209791_20	PF03245	N/A	N/A	Bacteriophage Rz lysis protein	Phage_lysis
HAMAP	UHGV-0209791_20	MF_04137	N/A	N/A	Spanin, inner membrane subunit	N/A
structural_annotation	UHGV-0209791_20	PF03245,MF_04137	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_21	phrog_35226	182.1	0	N/A	unknown function
KOfam	UHGV-0209791_23	K07474	143.9	1.60028e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0209791_23	phrog_51	158.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-0209791_23	UniRef90_A0A3K3VQ24	337.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0209791_23	1073754.G0ZND3_9VIRU	268.0	0	Terminase small subunit	N/A
Pfam	UHGV-0209791_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-0209791_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_24	K06909	264.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0209791_24	phrog_3717	331.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0209791_24	UniRef90_Q9AZ00	917.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0209791_24	754331.AEME01000001_gene5	957.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0209791_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0209791_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0209791_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0209791_24	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_25	phrog_14911	688.3	0	N/A	unknown function
UniRef90	UHGV-0209791_25	UniRef90_E9TCA7	1402.0	0	Putative ATP synthase F1, epsilon subunit	N/A
eggNOG-mapper	UHGV-0209791_25	1524881.A0A088CQ69_9CAUD	1426.0	0	actin binding	N/A
Pfam	UHGV-0209791_25	PF16510	N/A	N/A	Phage P22-like portal protein	P22_portal
structural_annotation	UHGV-0209791_25	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_26	phrog_648	375.9	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0209791_26	UniRef90_A0A6C9DRL0	446.0	0	Scaffolding protein	N/A
eggNOG-mapper	UHGV-0209791_26	754331.AEME01000001_gene7	525.0	0	N/A	N/A
structural_annotation	UHGV-0209791_26	PF09306	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_27	phrog_283	333.2	0	major head protein	head and packaging
UniRef90	UHGV-0209791_27	UniRef90_A0A7L7ST24	782.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0209791_27	1524881.A0A088CQ56_9CAUD	785.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0209791_27	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0209791_27	PF11651,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_28	phrog_1175	90.7	9.1e-27	N/A	unknown function
PHROG	UHGV-0209791_29	phrog_637	220.0	0	head-tail adaptor Ad3	connector
UniRef90	UHGV-0209791_29	UniRef90_A0A066T024	311.0	0	DNA stabilization protein	N/A
eggNOG-mapper	UHGV-0209791_29	754331.AEME01000001_gene10	311.0	0	Packaged DNA stabilization protein gp4	N/A
Pfam	UHGV-0209791_29	PF11650	N/A	N/A	P22 tail accessory factor	P22_Tail-4
structural_annotation	UHGV-0209791_29	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_30	phrog_578	629.7	0	head closure Hc3	connector
UniRef90	UHGV-0209791_30	UniRef90_P26749	899.0	0	Packaged DNA stabilization protein gp10	N/A
eggNOG-mapper	UHGV-0209791_30	155148.Q9AYZ4_BPHK6	940.0	0	Phage stabilisation protein	N/A
Pfam	UHGV-0209791_30	PF11134	N/A	N/A	Phage stabilisation protein	Phage_stabilise
structural_annotation	UHGV-0209791_30	PF11134,MF_01282,NF000022,NF038128,COG3292	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_31	phrog_1219	372.1	0	tail needle protein	tail
UniRef90	UHGV-0209791_31	UniRef90_Q9AYZ3	402.0	0	DNA stabilization protein	N/A
eggNOG-mapper	UHGV-0209791_31	1090133.G5DA78_9CAUD	418.0	0	N/A	N/A
PHROG	UHGV-0209791_32	phrog_651	257.4	0	head morphogenesis	head and packaging
UniRef90	UHGV-0209791_32	UniRef90_G8EYJ5	312.0	0	Head assembly protein	N/A
eggNOG-mapper	UHGV-0209791_32	754331.AEME01000001_gene13	313.0	0	N/A	N/A
Pfam	UHGV-0209791_32	PF11039	N/A	N/A	N/A	DUF2824
structural_annotation	UHGV-0209791_32	PF11039,MF_02210,NF011709,COG1670	N/A	N/A	N/A	N/A
PHROG	UHGV-0209791_33	phrog_598	296.8	0	DNA ejection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209791_33	UniRef90_Q716G4	404.0	0	Gene 11 protein	N/A
eggNOG-mapper	UHGV-0209791_33	1090133.G5DA80_9CAUD	409.0	0	viral entry into host cell	N/A
PHROG	UHGV-0209791_34	phrog_2534	698.4	0	released from the phage upon host infection	other
UniRef90	UHGV-0209791_34	UniRef90_A0A4Y8GQR9	810.0	0	Acyltransferase	N/A
eggNOG-mapper	UHGV-0209791_34	10761.Q716G3_BPSFV	783.0	0	Pfam:Inj_translocase	N/A
Pfam	UHGV-0209791_34	PF16928	N/A	N/A	DNA/protein translocase of phage P22 injectosome	Inj_translocase
PHROG	UHGV-0209791_35	phrog_770	877.0	0	DNA transfer protein	other
UniRef90	UHGV-0209791_35	UniRef90_A0A7I8Z6H9	1216.0	0	DNA transfer protein	N/A
eggNOG-mapper	UHGV-0209791_35	10761.Q716G2_BPSFV	1212.0	0	N/A	N/A
PHROG	UHGV-0209791_36	phrog_6067	359.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0209791_36	642227.HA49_08620	137.0	3.29e-39	N/A	N/A
PHROG	UHGV-0209791_37	phrog_6823	285.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0209791_37	1115515.EV102420_38_00020	229.0	0	N/A	N/A
KOfam	UHGV-0209791_38	K21495	40.1	0.000000000099	fitA; antitoxin FitA	N/A
PHROG	UHGV-0209791_38	phrog_795	103.5	1.4e-30	partition protein ATPase	other
UniRef90	UHGV-0209791_38	UniRef90_A0A377LI52	149.0	1.4013e-45	Putative transcriptional repressor	N/A
eggNOG-mapper	UHGV-0209791_38	329864.B8K1J0_9CAUD	145.0	1.12104e-44	Arc-like DNA binding domain	N/A
Pfam	UHGV-0209791_38	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
Pfam	UHGV-0209791_38	PF11423	N/A	N/A	Regulatory protein Mnt	Repressor_Mnt
structural_annotation	UHGV-0209791_38	PF03869,TIGR04563,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_39	K16709	57.1	1.1e-16	amsF; amylovoran biosynthesis protein AmsF	N/A
PHROG	UHGV-0209791_39	phrog_8280	355.1	0	tail spike protein with colonic acid degradation activity	tail
UniRef90	UHGV-0209791_39	UniRef90_A0A5D8LZT7	1763.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0209791_39	1524881.A0A088CQ58_9CAUD	224.0	0	pathogenesis	N/A
Pfam	UHGV-0209791_39	PF09008	N/A	N/A	Head binding	Head_binding
Pfam	UHGV-0209791_39	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0209791_39	PF09008	N/A	N/A	N/A	N/A
KOfam	UHGV-0209791_40	K22708	269.3	0	tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]	N/A
PHROG	UHGV-0209791_40	phrog_22088	429.9	0	N/A	unknown function
UniRef90	UHGV-0209791_40	UniRef90_A0A5D8M0H3	726.0	0	Glycosyltransferase family 2 protein	N/A
eggNOG-mapper	UHGV-0209791_40	904314.SEVCU012_1148	174.0	0	Glycosyltransferase like family 2	N/A
Pfam	UHGV-0209791_40	PF00535	N/A	N/A	Glycosyl transferase family 2	Glycos_transf_2
COG	UHGV-0209791_40	COG0463	N/A	N/A	Glycosyltransferase involved in cell wall bisynthesis	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0209791	Yes	30,958	47	77	1
UHGV-0200284	No	27,198	48	69	1
UHGV-0255233	No	26,227	48	66	1
UHGV-0142838	No	25,920	48	65	1
UHGV-1405008	No	25,920	48	65	1
UHGV-0105381	No	24,558	47	62	1
UHGV-1822527	No	18,237	48	46	1
UHGV-2167736	No	16,041	49	41	1
UHGV-1806636	No	15,953	49	41	1