Viral OTU vOTU-018893

vOTU: vOTU-018893

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-018893
Number of Genomes	5
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Quimbyviridae
Taxonomy (UHGV)	vFAM-00009 → vSUBFAM-00081 → vOTU-018893
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1436459
Biosample ID	SAMEA3664971
Length	53,936 bps
CheckV Completeness	75.57% (Medium-quality)
CDS Count	78
CDS Density	90.25%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1436459_1	K04763	72.3	7.5e-21	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1436459_1	phrog_1	109.9	2.9e-32	integrase	integration and excision
UniRef90	UHGV-1436459_1	UniRef90_B0NM83	790.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1436459_1	449673.BACSTE_00585	790.0	0	Phage integrase SAM-like domain	N/A
Pfam	UHGV-1436459_1	PF17293	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_5
Pfam	UHGV-1436459_1	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-1436459_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1436459_1	PF17293,PF13102,PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1436459_3	K06400	100.4	2e-29	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1436459_3	phrog_125	110.4	1.6e-32	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436459_3	UniRef90_D1K5B2	378.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1436459_3	1123058.KB894235_gene1329	75.5	0.000000000000465	Resolvase, N terminal domain	N/A
Pfam	UHGV-1436459_3	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1436459_3	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1436459_3	PF00239,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_8	PF08211	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436459_10	471870.BACINT_00445	79.0	1.31e-18	N/A	N/A
UniRef90	UHGV-1436459_11	UniRef90_D1K5B5	670.0	0	LPD29 domain-containing protein	N/A
eggNOG-mapper	UHGV-1436459_11	1235803.C825_02554	85.1	0.00000000000000193	N/A	N/A
Pfam	UHGV-1436459_11	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
structural_annotation	UHGV-1436459_11	PF18847	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_13	phrog_2384	324.1	0	N/A	unknown function
UniRef90	UHGV-1436459_13	UniRef90_UPI001B8BFE22	528.0	0	P63C domain-containing protein	N/A
eggNOG-mapper	UHGV-1436459_13	910313.HMPREF9320_0988	323.0	0	P63C domain	N/A
Pfam	UHGV-1436459_13	PF10546	N/A	N/A	P63C domain	P63C
structural_annotation	UHGV-1436459_13	PF10546,COG3617	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_14	PF13004	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436459_15	445970.ALIPUT_01212	88.2	3.01e-19	N/A	N/A
PHROG	UHGV-1436459_16	phrog_4002	59.5	5.5e-17	N/A	unknown function
UniRef90	UHGV-1436459_16	UniRef90_A0A7J5W3F6	67.4	0.000000000132	N/A	N/A
Pfam	UHGV-1436459_16	PF14730	N/A	N/A	N/A	DUF4468
structural_annotation	UHGV-1436459_16	PF14730,TIGR03931	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_18	phrog_130	73.0	5.2e-21	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1436459_18	UniRef90_UPI0018F5324F	92.4	5.88e-22	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1436459_18	997884.HMPREF1068_02209	92.0	6.39e-21	BRO family, N-terminal domain	N/A
Pfam	UHGV-1436459_18	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1436459_18	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-1436459_19	phrog_63	75.7	8e-22	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1436459_19	UniRef90_A0A415SHK7	286.0	0	Phage antirepressor	N/A
eggNOG-mapper	UHGV-1436459_19	1077285.AGDG01000027_gene1829	115.0	1.7e-29	BRO family, N-terminal domain	N/A
Pfam	UHGV-1436459_19	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1436459_19	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1436459_19	PF03374,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_21	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_26	NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_30	phrog_32732	117.1	8.7e-35	N/A	unknown function
UniRef90	UHGV-1436459_30	UniRef90_F3QSM2	176.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1436459_30	762982.HMPREF9442_01182	176.0	0	N/A	N/A
dbAPIS	UHGV-1436459_30	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_30	PF10458	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_31	PF02699,MF_01354,NF005100,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-1436459_32	K04485	41.3	0.000000000013	radA, sms; DNA repair protein RadA/Sms	N/A
PHROG	UHGV-1436459_32	phrog_239	71.0	5.1e-21	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436459_32	UniRef90_UPI00125CCE12	660.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1436459_32	1121887.AUDK01000018_gene3207	169.0	0	AAA domain	N/A
Pfam	UHGV-1436459_32	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1436459_32	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-1436459_32	PF06745,MF_01498,TIGR00416,COG0467	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_33	PF02566	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_34	phrog_1365	52.2	0.0000000000000081	N/A	unknown function
PHROG	UHGV-1436459_35	phrog_1281	152.2	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1436459_35	UniRef90_A0A174IJF6	279.0	0	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1436459_35	1095752.HMPREF9969_2152	155.0	0	N/A	N/A
Pfam	UHGV-1436459_35	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1436459_35	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_35	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_36	phrog_8366	62.1	9.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1436459_36	991.IW20_00170	109.0	5.98e-29	N/A	N/A
KOfam	UHGV-1436459_37	K20478	55.9	1.4e-16	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1436459_37	phrog_9959	207.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1436459_37	UniRef90_A0A415SRF7	1365.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1436459_37	742727.HMPREF9447_04839	217.0	0	tape measure	N/A
Pfam	UHGV-1436459_37	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1436459_37	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_37	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_38	PF06894,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_39	phrog_6767	50.0	0.000000000000041	N/A	unknown function
structural_annotation	UHGV-1436459_39	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_40	PF05561,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_41	phrog_5377	45.0	0.0000000000016	N/A	unknown function
structural_annotation	UHGV-1436459_42	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436459_44	UniRef90_A0A8B2AWS5	417.0	0	Major capsid protein	N/A
structural_annotation	UHGV-1436459_44	PF03864,MF_04133,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_45	PF21430	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_47	phrog_979	112.9	2.3e-33	terminase large subunit	head and packaging
UniRef90	UHGV-1436459_47	UniRef90_A0A415SRG6	849.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1436459_47	1121286.AUMT01000013_gene2660	162.0	8.38005e-41	Terminase-like family	N/A
Pfam	UHGV-1436459_47	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1436459_47	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1436459_47	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_49	phrog_64	85.0	6.4e-25	portal protein	head and packaging
UniRef90	UHGV-1436459_49	UniRef90_A0A5P0X070	509.0	0	Phage portal protein	N/A
Pfam	UHGV-1436459_49	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1436459_49	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_50	phrog_38044	229.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1436459_50	657309.BXY_05160	265.0	0	N/A	N/A
structural_annotation	UHGV-1436459_50	PF14594,PF04862,PF18141,TIGR01665,NF038128,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436459_51	742727.HMPREF9447_04856	86.3	6.53e-21	N/A	N/A
PHROG	UHGV-1436459_52	phrog_24896	41.5	0.0000000000049	N/A	unknown function
eggNOG-mapper	UHGV-1436459_52	693979.Bache_2416	70.1	0.00000000144	nuclear chromosome segregation	N/A
COG	UHGV-1436459_52	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-1436459_54	272559.BF9343_2359	114.0	1.65e-30	N/A	N/A
UniRef90	UHGV-1436459_55	UniRef90_UPI000E53ECB8	258.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1436459_55	1121100.JCM6294_559	151.0	7.00649e-45	N/A	N/A
Pfam	UHGV-1436459_55	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-1436459_55	PF05105,NF035928,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1436459_57	K08640	108.1	1.3e-31	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1436459_57	phrog_894	97.7	1.3e-28	endolysin	lysis
UniRef90	UHGV-1436459_57	UniRef90_A0A1Q6HQG5	273.0	0	Peptidase M15	N/A
eggNOG-mapper	UHGV-1436459_57	411901.BACCAC_01119	211.0	0	Peptidase M15	N/A
Pfam	UHGV-1436459_57	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1436459_57	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_57	PF08291,COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436459_58	PF14607,MF_01372,NF038393	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_60	phrog_20787	45.0	0.00000000000052	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1436459_60	449673.BACSTE_02041	132.0	3.82e-29	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-1436459_60	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-1436459_62	phrog_26448	51.5	0.0000000000000078	N/A	unknown function
eggNOG-mapper	UHGV-1436459_62	762984.HMPREF9445_00190	265.0	0	N/A	N/A
Pfam	UHGV-1436459_62	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-1436459_62	PF20647	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436459_63	UniRef90_A0A8D9UI10	124.0	3.01e-35	Chromosomal replication initiator protein	N/A
eggNOG-mapper	UHGV-1436459_63	762982.HMPREF9442_01200	109.0	4.39e-30	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-1436459_63	PF08299,NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_64	phrog_16490	369.5	0	N/A	unknown function
UniRef90	UHGV-1436459_64	UniRef90_A0A7M1RSH1	234.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-1436459_64	762968.HMPREF9441_00555	543.0	0	N/A	N/A
PHROG	UHGV-1436459_65	phrog_31654	276.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1436459_65	762968.HMPREF9441_00554	243.0	0	N/A	N/A
PHROG	UHGV-1436459_66	phrog_28898	300.8	0	N/A	unknown function
UniRef90	UHGV-1436459_66	UniRef90_R5UN07	175.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1436459_66	762968.HMPREF9441_00553	263.0	0	N/A	N/A
structural_annotation	UHGV-1436459_66	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_67	phrog_34053	122.2	3.4e-37	N/A	unknown function
PHROG	UHGV-1436459_68	phrog_38431	247.1	0	N/A	unknown function
UniRef90	UHGV-1436459_68	UniRef90_R5U340	226.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1436459_68	762982.HMPREF9442_01205	222.0	0	N/A	N/A
UniRef90	UHGV-1436459_69	UniRef90_F3QSP6	214.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1436459_69	762982.HMPREF9442_01206	214.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436459_70	869213.JCM21142_114629	117.0	2.74e-31	N/A	N/A
PHROG	UHGV-1436459_71	phrog_1373	59.2	7.9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1436459_71	UniRef90_UPI001899E1E5	169.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1436459_71	547042.BACCOPRO_00729	79.7	2.08e-18	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1436459_71	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1436459_71	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1436459_72	PF11169	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436459_73	UniRef90_A0A415IS58	85.1	1.33e-18	LacI family DNA-binding transcriptional regulator	N/A
structural_annotation	UHGV-1436459_73	PF13384,TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_74	phrog_1818	99.5	1.4e-29	N/A	unknown function
UniRef90	UHGV-1436459_74	UniRef90_UPI001230C7A4	143.0	1.32e-40	HAD domain-containing protein	N/A
eggNOG-mapper	UHGV-1436459_74	1458859.A0A088C4I8_9CAUD	83.2	7.46e-18	N/A	N/A
Pfam	UHGV-1436459_74	PF18143	N/A	N/A	HAD domain in Swiss Army Knife RNA repair proteins	HAD_SAK_2
structural_annotation	UHGV-1436459_74	PF18143,NF003937,COG0241	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436459_75	UniRef90_H2A0H1	154.0	1.4013e-45	Putative nuclease	N/A
eggNOG-mapper	UHGV-1436459_75	213774.R9R2E1_9CAUD	56.2	0.0000000845	HNH endonuclease	N/A
structural_annotation	UHGV-1436459_75	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_77	phrog_8684	95.4	5.9e-30	N/A	unknown function
UniRef90	UHGV-1436459_77	UniRef90_UPI001C016A5B	267.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1436459_77	762968.HMPREF9441_00543	144.0	1.98984e-42	YopX protein	N/A
Pfam	UHGV-1436459_77	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1436459_77	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1436459_77	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1436459_78	phrog_874	73.3	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1436459_78	762968.HMPREF9441_00541	142.0	1.58e-39	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1436459	Yes	53,936	40	76	1
UHGV-1464200	No	35,666	40	55	1
UHGV-2021358	No	25,000	40	38	1
UHGV-0360576	No	15,029	40	23	1
UHGV-0095142	No	12,697	41	19	1