Viral OTU vOTU-018920

vOTU: vOTU-018920

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-018920
Number of Genomes	6
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00681 → vOTU-018920
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1421847
Biosample ID	SAMEA1972440
Length	23,157 bps
CheckV Completeness	51.20% (Medium-quality)
CDS Count	50
CDS Density	90.84%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1421847_2	phrog_22984	86.8	1.6e-25	N/A	unknown function
PHROG	UHGV-1421847_3	phrog_21718	189.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1421847_3	476272.RUMHYD_01768	196.0	0	N/A	N/A
UniRef90	UHGV-1421847_4	UniRef90_A0A843HPX3	57.8	0.00000000243	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1421847_4	1235790.C805_00057	54.7	0.0000000068	N/A	N/A
UniRef90	UHGV-1421847_5	UniRef90_A0A417UWY7	117.0	8.15e-32	CTP synthase	N/A
eggNOG-mapper	UHGV-1421847_5	476272.RUMHYD_01766	79.3	7.69e-18	N/A	N/A
PHROG	UHGV-1421847_6	phrog_3754	115.0	4.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-1421847_6	476272.RUMHYD_01764	276.0	0	N/A	N/A
PHROG	UHGV-1421847_8	phrog_581	272.0	0	minor head protein	head and packaging
UniRef90	UHGV-1421847_8	UniRef90_A0A373MXM0	539.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1421847_8	476272.RUMHYD_01761	618.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1421847_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1421847_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421847_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_10	phrog_774	59.5	6.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1421847_10	397290.C810_05225	129.0	9.24e-38	N/A	N/A
PHROG	UHGV-1421847_11	phrog_1129	90.7	7.5e-27	holin	lysis
UniRef90	UHGV-1421847_11	UniRef90_UPI00051B7422	161.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1421847_11	1232453.BAIF02000030_gene2527	151.0	0	N/A	N/A
Pfam	UHGV-1421847_11	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1421847_11	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_12	phrog_533	255.0	0	portal protein	head and packaging
UniRef90	UHGV-1421847_12	UniRef90_A0A173R9C0	812.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1421847_12	476272.RUMHYD_01758	892.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1421847_12	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_13	phrog_3458	56.1	5.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1421847_13	1540090.A0A0A0RMG9_9CAUD	48.9	0.000000703	N/A	N/A
KOfam	UHGV-1421847_14	K06909	423.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1421847_14	phrog_3717	164.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1421847_14	UniRef90_UPI00156D9D24	1095.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1421847_14	33035.JPJF01000106_gene3136	749.0	0	Terminase small subunit	N/A
Pfam	UHGV-1421847_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1421847_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1421847_14	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1421847_14	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1421847_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1421847_14	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_16	phrog_33130	113.0	8.4e-34	N/A	unknown function
UniRef90	UHGV-1421847_16	UniRef90_A0A3B9CD52	73.6	0.00000000000000231	S1-like domain-containing protein	N/A
structural_annotation	UHGV-1421847_16	PF10922,MF_00839	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421847_17	476272.RUMHYD_01751	169.0	0	N/A	N/A
PHROG	UHGV-1421847_19	phrog_15198	76.2	2.7e-22	N/A	unknown function
UniRef90	UHGV-1421847_19	UniRef90_UPI00046784E9	92.0	2.46e-20	N/A	N/A
eggNOG-mapper	UHGV-1421847_19	665950.HMPREF1025_02540	53.5	0.00000347	N/A	N/A
Pfam	UHGV-1421847_19	PF04448	N/A	N/A	N/A	DUF551
Pfam	UHGV-1421847_20	PF21344	N/A	N/A	Alpha-aminoadipate carrier protein LysW-like, globular domain	LysW-like_globular
PHROG	UHGV-1421847_22	phrog_30930	44.4	0.0000000000027	N/A	unknown function
eggNOG-mapper	UHGV-1421847_22	1214184.ALKY01000039_gene933	51.2	0.00000147	N/A	N/A
eggNOG-mapper	UHGV-1421847_24	742740.HMPREF9474_03128	77.0	1.89e-16	N/A	N/A
structural_annotation	UHGV-1421847_25	PF00601	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_26	phrog_20593	47.6	0.00000000000014	N/A	unknown function
KOfam	UHGV-1421847_27	K19779	46.2	0.00000000000057	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-1421847_27	phrog_599	54.8	0.0000000000000021	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1421847_27	UniRef90_A0A3E3JYC6	153.0	0	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-1421847_27	194949.Q7Y2K1_9CAUD	52.0	0.0000000641	Restriction alleviation protein Lar	N/A
Pfam	UHGV-1421847_27	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-1421847_27	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1421847_27	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_30	phrog_8684	86.8	1.2e-25	N/A	unknown function
UniRef90	UHGV-1421847_30	UniRef90_A0A3E3JY05	340.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1421847_30	476272.RUMHYD_03337	170.0	0	N/A	N/A
Pfam	UHGV-1421847_30	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1421847_30	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1421847_30	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421847_32	1235800.C819_02246	60.8	0.00000000114	N/A	N/A
PHROG	UHGV-1421847_33	phrog_4433	137.6	0	N/A	unknown function
UniRef90	UHGV-1421847_33	UniRef90_A0A1C6I166	164.0	1.4013e-45	Collagen triple helix repeat (20 copies)	N/A
eggNOG-mapper	UHGV-1421847_33	665950.HMPREF1025_01373	142.0	1.32e-38	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1421847_33	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-1421847_35	phrog_2562	168.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421847_35	UniRef90_A0A3E3JYN1	555.0	0	N/A	N/A
eggNOG-mapper	UHGV-1421847_35	411461.DORFOR_00014	312.0	0	N/A	N/A
Pfam	UHGV-1421847_35	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1421847_35	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1421847_35	PF14297	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_37	phrog_1682	46.5	0.00000000000051	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421847_37	UniRef90_A0A0F0CCS0	156.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1421847_37	742733.HMPREF9469_01846	173.0	0	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1421847_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1421847_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_38	phrog_7566	59.0	6.4e-17	N/A	unknown function
UniRef90	UHGV-1421847_38	UniRef90_A0A373CFM5	82.8	8.98e-19	ClpX-type ZB domain-containing protein	N/A
eggNOG-mapper	UHGV-1421847_38	742733.HMPREF9469_01847	90.1	1.96e-22	N/A	N/A
PHROG	UHGV-1421847_39	phrog_1227	248.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421847_39	UniRef90_A0A3E3JY66	541.0	0	N/A	N/A
eggNOG-mapper	UHGV-1421847_39	33035.JPJF01000071_gene4463	392.0	0	N/A	N/A
Pfam	UHGV-1421847_39	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1421847_39	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1421847_39	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_40	phrog_561	148.6	3.64338e-44	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421847_40	UniRef90_UPI0011C8A287	265.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1421847_40	33035.JPJF01000071_gene4462	254.0	0	N/A	N/A
Pfam	UHGV-1421847_40	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-1421847_40	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_41	phrog_1499	298.0	0	N/A	unknown function
UniRef90	UHGV-1421847_41	UniRef90_A0A2N5P5I0	773.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1421847_41	742733.HMPREF9469_01850	627.0	0	DNA recombination	N/A
COG	UHGV-1421847_41	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1421847_41	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421847_42	PF09392	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_47	phrog_66	42.2	0.000000000019	excisionase and transcriptional regulator	integration and excision
UniRef90	UHGV-1421847_47	UniRef90_A0A1C5X924	111.0	3.3e-31	DNA binding domain, excisionase family	N/A
eggNOG-mapper	UHGV-1421847_47	610130.Closa_1362	105.0	2.18e-29	Helix-turn-helix domain	N/A
Pfam	UHGV-1421847_47	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1421847_47	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1421847_47	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1421847_48	K22300	54.2	0.0000000000000029	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1421847_48	phrog_8	64.1	3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1421847_48	UniRef90_UPI00156F1ED4	248.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1421847_48	476272.RUMHYD_02826	154.0	0	TRANSCRIPTIONal	N/A
Pfam	UHGV-1421847_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1421847_48	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1421847_48	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1421847_49	phrog_20886	120.1	3.9e-36	N/A	unknown function
eggNOG-mapper	UHGV-1421847_49	665950.HMPREF1025_02563	106.0	1.92e-29	N/A	N/A
structural_annotation	UHGV-1421847_49	PF06114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421847_50	476272.RUMHYD_01731	244.0	0	N/A	N/A
structural_annotation	UHGV-1421847_50	PF13429,TIGR02552,COG0457	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1421847	Yes	23,157	40	51	1
UHGV-0043097	No	23,157	40	51	1
UHGV-0420885	No	10,202	40	23	1
UHGV-1335728	No	10,202	40	23	1
UHGV-1715704	No	10,566	39	21	1
UHGV-1993520	No	10,332	39	21	1