Viral OTU vOTU-022601

vOTU: vOTU-022601

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-022601
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00197 → vOTU-022601
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruminococcus_C → Ruminococcus_C sp000437255
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0181160
Biosample ID	SAMN09781784
Length	29,916 bps
CheckV Completeness	67.50% (Medium-quality)
CDS Count	36
CDS Density	95.25%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0181160_2	K06400	283.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0181160_2	phrog_95	311.0	0	integrase	integration and excision
UniRef90	UHGV-0181160_2	UniRef90_R7FBT6	625.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0181160_2	697281.Mahau_2563	561.0	0	resolvase	N/A
Pfam	UHGV-0181160_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0181160_2	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0181160_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0181160_2	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0181160_3	K01447	98.6	9.3e-29	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0181160_3	phrog_1794	101.8	0	amidase	lysis
UniRef90	UHGV-0181160_3	UniRef90_A0A374VU40	342.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0181160_3	411473.RUMCAL_00096	344.0	0	Ami_2	N/A
Pfam	UHGV-0181160_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0181160_3	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0181160_3	PF01510,PF20780,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_4	phrog_443	57.4	4.5e-16	holin	lysis
UniRef90	UHGV-0181160_4	UniRef90_R6R2Q3	91.7	4.44e-23	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0181160_4	626523.GCWU000342_01012	79.3	1.09e-18	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0181160_4	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0181160_4	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_5	phrog_1193	47.2	0.00000000000035	hemolysin	other
UniRef90	UHGV-0181160_5	UniRef90_R7H572	123.0	2e-35	Gp19	N/A
eggNOG-mapper	UHGV-0181160_5	1292035.H476_1000	63.2	0.00000000000287	Haemolysin XhlA	N/A
Pfam	UHGV-0181160_5	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
structural_annotation	UHGV-0181160_7	PF14594,TIGR03361,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_9	phrog_1272	238.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0181160_9	UniRef90_R7FII5	576.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0181160_9	411473.RUMCAL_01938	578.0	0	tail tape measure protein, TP901	N/A
Pfam	UHGV-0181160_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0181160_9	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0181160_9	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_10	phrog_774	60.1	4.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0181160_10	397290.C810_05225	124.0	6.48e-36	N/A	N/A
structural_annotation	UHGV-0181160_12	PF11607,MF_01077,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_13	phrog_581	305.0	0	minor head protein	head and packaging
UniRef90	UHGV-0181160_13	UniRef90_U2K8C2	641.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0181160_13	411473.RUMCAL_01925	641.0	0	N/A	N/A
Pfam	UHGV-0181160_13	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0181160_13	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0181160_13	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181160_13	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_14	phrog_533	318.6	0	portal protein	head and packaging
UniRef90	UHGV-0181160_14	UniRef90_U2KRP5	599.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0181160_14	411473.RUMCAL_01924	599.0	0	N/A	N/A
structural_annotation	UHGV-0181160_14	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0181160_15	K06909	114.7	1.1e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0181160_15	phrog_10250	141.2	5.89947e-42	N/A	unknown function
UniRef90	UHGV-0181160_15	UniRef90_A0A315Y4A8	467.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0181160_15	641112.ACOK01000073_gene2888	460.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0181160_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0181160_15	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0181160_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0181160_15	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_16	phrog_706	136.9	1.2e-40	N/A	unknown function
UniRef90	UHGV-0181160_16	UniRef90_A0A173TSE6	117.0	7.89e-30	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0181160_16	411473.RUMCAL_01937	233.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0181160_16	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0181160_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_17	phrog_4450	72.0	9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0181160_17	641112.ACOK01000073_gene2902	90.9	7e-22	N/A	N/A
Pfam	UHGV-0181160_17	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0181160_17	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_18	phrog_3099	150.1	7.00649e-45	N/A	unknown function
eggNOG-mapper	UHGV-0181160_18	411473.RUMCAL_01935	259.0	0	N/A	N/A
structural_annotation	UHGV-0181160_18	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_19	phrog_3266	168.6	0	tail completion	connector
UniRef90	UHGV-0181160_19	UniRef90_A0A3C0IHV8	187.0	0	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0181160_19	411473.RUMCAL_01934	216.0	0	N/A	N/A
structural_annotation	UHGV-0181160_19	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_20	phrog_556	84.3	1.2e-24	minor head protein	head and packaging
eggNOG-mapper	UHGV-0181160_20	1292035.H476_1011	61.2	0.000000000157	Minor capsid protein	N/A
Pfam	UHGV-0181160_20	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0181160_20	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_21	phrog_3366	41.5	0.0000000000006	N/A	unknown function
eggNOG-mapper	UHGV-0181160_21	411473.RUMCAL_01932	119.0	1.18e-33	N/A	N/A
structural_annotation	UHGV-0181160_21	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_22	phrog_541	91.6	6.5e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0181160_22	642492.Clole_0822	83.2	1.11e-18	N/A	N/A
PHROG	UHGV-0181160_23	phrog_267	65.8	1.5e-19	major head protein	head and packaging
UniRef90	UHGV-0181160_23	UniRef90_A0A1C6GMA6	395.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0181160_23	718252.FP2_06660	241.0	0	N/A	N/A
structural_annotation	UHGV-0181160_23	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_24	phrog_194	49.7	0.000000000000075	head scaffolding protein	head and packaging
UniRef90	UHGV-0181160_24	UniRef90_R7FEY9	238.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0181160_24	411473.RUMCAL_01929	238.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0181160_24	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0181160_24	PF06810,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-0181160_25	K07474	69.4	1e-19	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0181160_25	phrog_17390	65.2	4.6e-19	N/A	unknown function
UniRef90	UHGV-0181160_25	UniRef90_UPI0001F01BB6	112.0	1.87e-29	terminase small subunit	N/A
eggNOG-mapper	UHGV-0181160_25	1158607.UAU_05157	88.6	8.32e-21	Terminase small subunit	N/A
Pfam	UHGV-0181160_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-0181160_25	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_26	phrog_36	75.7	7.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0181160_26	UniRef90_UPI001D017002	91.3	4.55e-21	N/A	N/A
Pfam	UHGV-0181160_26	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0181160_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0181160_26	PF04545,MF_00674,TIGR02980,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-0181160_28	K14440	111.2	4.3e-33	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0181160_28	phrog_62	399.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181160_28	UniRef90_A0A327YN49	637.0	0	SNF2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181160_28	86416.Clopa_0567	614.0	0	snf2 family	N/A
PADLOC	UHGV-0181160_28	DpdE_00010	84.3	1.6e-24	DpdE	DPD
Pfam	UHGV-0181160_28	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0181160_28	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0181160_28	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0181160_28	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_29	phrog_93	61.4	1.3e-17	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181160_29	UniRef90_A0A2S0JWS5	87.4	1.7e-20	Nuclease	N/A
eggNOG-mapper	UHGV-0181160_29	1395587.P364_0122120	82.4	2.61e-19	VRR_NUC	N/A
Pfam	UHGV-0181160_29	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0181160_29	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_30	phrog_256	1005.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181160_30	UniRef90_UPI0018CF4112	962.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0181160_30	717606.PaecuDRAFT_3110	909.0	0	virulence-associated E family protein	N/A
Pfam	UHGV-0181160_30	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0181160_30	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0181160_30	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
KOfam	UHGV-0181160_31	K02334	809.4	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0181160_31	phrog_17	381.8	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181160_31	UniRef90_UPI0014517056	829.0	0	DNA polymerase	N/A
eggNOG-mapper	UHGV-0181160_31	1449126.JQKL01000006_gene840	784.0	0	DNA polymerase	N/A
Pfam	UHGV-0181160_31	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0181160_31	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0181160_31	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_32	phrog_112	176.1	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181160_32	UniRef90_UPI0009F98B20	241.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181160_32	1449126.JQKL01000006_gene839	236.0	0	N/A	N/A
Pfam	UHGV-0181160_32	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0181160_32	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_33	phrog_69	339.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181160_33	UniRef90_UPI000783C69C	388.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181160_33	1460635.JCM19038_2776	374.0	0	N/A	N/A
Pfam	UHGV-0181160_33	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0181160_33	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0181160_33	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0181160_34	phrog_18562	51.3	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0181160_34	679201.HMPREF9334_00305	53.5	0.0000013	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0181160	Yes	29,916	48	68	1
UHGV-0210706	No	13,471	47	38	1
UHGV-0210316	No	12,036	49	26	1