Viral OTU vOTU-022817

vOTU: vOTU-022817

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-022817
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-01864 → vOTU-022817
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1529184
Biosample ID	SAMEA2737802
Length	25,652 bps
CheckV Completeness	55.57% (Medium-quality)
CDS Count	40
CDS Density	90.95%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1529184_1	K06400	267.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1529184_1	phrog_95	287.0	0	integrase	integration and excision
UniRef90	UHGV-1529184_1	UniRef90_UPI0011DE2A43	474.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1529184_1	742723.HMPREF9477_00942	478.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1529184_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1529184_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1529184_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1529184_1	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_2	phrog_5059	239.0	0	N/A	unknown function
UniRef90	UHGV-1529184_2	UniRef90_A0A7X5EGP0	364.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529184_2	632292.Calhy_0845	203.0	0	N/A	N/A
Pfam	UHGV-1529184_2	PF08861	N/A	N/A	N/A	DUF1828
Pfam	UHGV-1529184_2	PF08862	N/A	N/A	N/A	DUF1829
structural_annotation	UHGV-1529184_2	PF08862,PF08861,MF_00722,COG3372	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1529184_3	632292.Calhy_0844	60.5	0.0000000018	N/A	N/A
COG	UHGV-1529184_4	COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_5	phrog_20886	71.8	5.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1529184_5	1321782.HMPREF1986_02242	52.0	0.0000000929	N/A	N/A
structural_annotation	UHGV-1529184_5	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1529184_6	K22300	52.2	0.000000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1529184_6	phrog_8	73.3	4.4e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1529184_6	UniRef90_R7N2W9	242.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1529184_6	411462.DORLON_00819	105.0	1.62e-27	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1529184_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1529184_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1529184_6	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1529184_7	UniRef90_R7N1J3	122.0	3.09e-35	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1529184_7	420890.LCGL_1425	49.7	0.000000837	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1529184_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1529184_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1529184_12	MF_02071,TIGR00413,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_14	phrog_1499	299.7	0	N/A	unknown function
UniRef90	UHGV-1529184_14	UniRef90_A0A316M6R3	931.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1529184_14	742733.HMPREF9469_01850	630.0	0	DNA recombination	N/A
COG	UHGV-1529184_14	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-1529184_14	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_15	phrog_561	136.0	2.69999e-40	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529184_15	UniRef90_A0A6N7W7U3	275.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1529184_15	742733.HMPREF9469_01849	279.0	0	N/A	N/A
structural_annotation	UHGV-1529184_15	TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_16	phrog_1227	261.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529184_16	UniRef90_A0A316M6N2	536.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529184_16	742733.HMPREF9469_01848	349.0	0	N/A	N/A
Pfam	UHGV-1529184_16	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1529184_16	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1529184_16	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_17	phrog_7566	58.1	1.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1529184_17	1304866.K413DRAFT_3017	68.9	0.0000000000000784	N/A	N/A
PHROG	UHGV-1529184_18	phrog_1682	49.4	0.000000000000067	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529184_18	UniRef90_A0A0F0CCS0	165.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1529184_18	742733.HMPREF9469_01846	154.0	0	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1529184_18	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1529184_18	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_20	phrog_20437	174.0	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529184_20	UniRef90_A0A316M6Z3	557.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529184_20	97138.C820_00626	145.0	3.14e-39	N/A	N/A
Pfam	UHGV-1529184_20	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1529184_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1529184_20	PF14297	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_21	phrog_323	46.1	0.00000000000056	endonuclease	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1529184_21	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
Pfam	UHGV-1529184_21	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1529184_21	PF13613,NF040595,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_22	phrog_424	71.2	1.3e-20	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1529184_22	UniRef90_A0A2H4JC51	432.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-1529184_22	693746.OBV_43240	533.0	0	N/A	N/A
COG	UHGV-1529184_22	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1529184_22	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1529184_23	K07319	100.6	1.3e-29	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1529184_23	phrog_16	229.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529184_23	UniRef90_A0A316MA86	1714.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-1529184_23	1298920.KI911353_gene2709	1374.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-1529184_23	MTase_II_00085	40.0	8.3e-17	Type II methyltransferase	RM
Pfam	UHGV-1529184_23	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1529184_23	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1529184_23	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1529184_23	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_26	phrog_1571	95.6	3.7e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529184_26	UniRef90_A0A1Q9J7B4	190.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1529184_26	702438.HMPREF9431_00759	131.0	1.41e-37	HNH endonuclease	N/A
COG	UHGV-1529184_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1529184_27	phrog_874	172.5	0	N/A	unknown function
UniRef90	UHGV-1529184_27	UniRef90_A0A6N7W7Q7	187.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1529184_27	411468.CLOSCI_00298	181.0	0	N/A	N/A
structural_annotation	UHGV-1529184_27	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1529184_28	PF13443,NF040507,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1529184_29	UniRef90_A0A412FGX2	99.4	4.27e-26	OrfB_Zn_ribbon domain-containing protein	N/A
PHROG	UHGV-1529184_32	phrog_5051	129.2	3.1e-38	N/A	unknown function
PHROG	UHGV-1529184_34	phrog_36	69.4	6.3e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1529184_34	UniRef90_UPI001F14539B	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529184_34	1235800.C819_02243	173.0	0	N/A	N/A
structural_annotation	UHGV-1529184_34	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1529184_36	K07474	120.1	3.3e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1529184_36	phrog_2606	202.5	0	terminase small subunit	head and packaging
UniRef90	UHGV-1529184_36	UniRef90_A0A6L6XD66	345.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1529184_36	411490.ANACAC_00784	230.0	0	terminase, small subunit	N/A
Pfam	UHGV-1529184_36	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1529184_36	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1529184_36	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1529184_36	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1529184_37	K06909	152.8	2.8026e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1529184_37	phrog_10250	233.3	0	N/A	unknown function
UniRef90	UHGV-1529184_37	UniRef90_A0A173S6P4	853.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1529184_37	903814.ELI_3215	659.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1529184_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1529184_37	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1529184_37	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1529184_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1529184_37	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_38	phrog_1233	87.5	1.7e-25	N/A	unknown function
UniRef90	UHGV-1529184_38	UniRef90_UPI001C39EFB9	90.5	3.91e-21	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1529184_38	1232453.BAIF02000011_gene3355	119.0	2.01e-33	N/A	N/A
PHROG	UHGV-1529184_39	phrog_64	351.7	0	portal protein	head and packaging
UniRef90	UHGV-1529184_39	UniRef90_A0A173S8B4	840.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-1529184_39	1042156.CXIVA_01850	624.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1529184_39	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1529184_39	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1529184_39	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1529184_40	phrog_115	378.8	0	minor head protein	head and packaging
UniRef90	UHGV-1529184_40	UniRef90_A0A173S657	474.0	0	NAD+--asparagine ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1529184_40	742740.HMPREF9474_02356	435.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1529184_40	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1529184_40	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1529184_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1529184_40	TIGR01641	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1529184	Yes	25,652	41	56	1
UHGV-0187298	No	19,653	41	43	1
UHGV-0070818	No	15,458	42	34	1