Viral OTU vOTU-024401

vOTU: vOTU-024401

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-024401
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-02484 → vGENUS-18361 → vOTU-024401
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0007687
Biosample ID	SAMEA4766409
Length	27,185 bps
CheckV Completeness	70.01% (Medium-quality)
CDS Count	34
CDS Density	92.00%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.01)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0007687_1	phrog_27197	64.4	1.5e-18	N/A	unknown function
COG	UHGV-0007687_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0007687_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_3	phrog_298	65.2	1.4e-19	exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0007687_3	521393.JH806633_gene1242	60.5	0.0000000215	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-0007687_3	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0007687_3	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_4	phrog_155	103.0	3.2e-30	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007687_4	UniRef90_UPI001C8E5FBF	132.0	1.54e-34	ERF family protein	N/A
eggNOG-mapper	UHGV-0007687_4	1536774.H70357_24790	123.0	6.02e-32	ERF superfamily	N/A
Pfam	UHGV-0007687_4	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0007687_4	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
KOfam	UHGV-0007687_5	K03111	142.0	6.30024e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0007687_5	phrog_44	140.5	1.10002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007687_5	UniRef90_A0A1Q6R0X3	170.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0007687_5	693746.OBV_12860	169.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0007687_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0007687_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0007687_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0007687_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0007687_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0007687_6	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0007687_7	K01160	60.9	3.6e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0007687_7	phrog_34	51.5	0.000000000000021	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007687_7	UniRef90_A0A843HIU7	142.0	1.93996e-41	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0007687_7	875454.BAEW01000002_gene491	129.0	6.41e-37	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0007687_7	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0007687_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0007687_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0007687_10	K22300	47.6	0.00000000000037	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
Pfam	UHGV-0007687_10	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0007687_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0007687_10	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_14	phrog_3136	143.7	5.00264e-43	N/A	unknown function
UniRef90	UHGV-0007687_14	UniRef90_UPI001CBCD733	141.0	2.03e-39	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0007687_14	97139.C824_00742	65.9	0.0000000000361	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0007687_14	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0007687_14	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0007687_17	UniRef90_A0A810QFN4	753.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007687_17	693746.OBV_01590	463.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007687_18	693746.OBV_01600	93.6	5.11e-18	N/A	N/A
PHROG	UHGV-0007687_19	phrog_1493	55.6	0.0000000000000012	endolysin	lysis
UniRef90	UHGV-0007687_19	UniRef90_A0A8D9PDS4	352.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0007687_19	1384066.JAGT01000001_gene130	95.5	1.48e-20	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0007687_19	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0007687_19	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0007687_19	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0007687_19	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_20	phrog_199	77.7	1.3e-22	holin	lysis
UniRef90	UHGV-0007687_20	UniRef90_R6DA24	173.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0007687_20	1160721.RBI_I01565	120.0	1.63e-32	Bacteriophage holin family	N/A
Pfam	UHGV-0007687_20	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0007687_20	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0007687_20	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0007687_20	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_21	phrog_134	45.6	0.00000000000098	N/A	unknown function
UniRef90	UHGV-0007687_21	UniRef90_A0A845N2N7	50.8	0.000000144	XkdX family protein	N/A
eggNOG-mapper	UHGV-0007687_21	1151292.QEW_0674	47.0	0.000000798	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0007687_21	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0007687_21	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_22	phrog_24451	53.6	0.0000000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0007687_22	1408437.JNJN01000040_gene189	129.0	3.55e-37	N/A	N/A
KOfam	UHGV-0007687_23	K16628	172.7	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0007687_23	phrog_819	149.0	0	tail protein	tail
eggNOG-mapper	UHGV-0007687_23	1408437.JNJN01000030_gene1051	60.5	0.000000565	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0007687_23	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0007687_23	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0007687_24	phrog_156	94.2	6.7e-29	portal protein	head and packaging
eggNOG-mapper	UHGV-0007687_24	693746.OBV_01670	717.0	0	N/A	N/A
structural_annotation	UHGV-0007687_24	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_25	phrog_3287	49.1	0.0000000000000041	virion structural protein	head and packaging
UniRef90	UHGV-0007687_25	UniRef90_A0A4D7ASB8	748.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007687_25	1519439.JPJG01000011_gene54	792.0	0	N/A	N/A
structural_annotation	UHGV-0007687_25	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-0007687_26	K06909	128.1	9e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0007687_26	phrog_979	153.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0007687_26	UniRef90_A0A4D7AXL6	717.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0007687_26	693746.OBV_01690	644.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0007687_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0007687_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0007687_26	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0007687_27	phrog_422	112.4	4e-33	major head protein	head and packaging
UniRef90	UHGV-0007687_27	UniRef90_K1TJJ5	350.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-0007687_27	693746.OBV_01700	517.0	0	N/A	N/A
Pfam	UHGV-0007687_27	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0007687_27	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0007687_29	1519439.JPJG01000011_gene57	206.0	0	N/A	N/A
structural_annotation	UHGV-0007687_29	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0007687_31	UniRef90_A0A4D7AM67	79.7	4.94e-16	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0007687_31	1519439.JPJG01000011_gene59	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0007687_32	693746.OBV_01760	62.0	0.00000000000376	N/A	N/A
PHROG	UHGV-0007687_33	phrog_15863	155.2	0	N/A	unknown function
UniRef90	UHGV-0007687_33	UniRef90_A0A810QAR9	238.0	0	Molecular chaperone DnaJ	N/A
eggNOG-mapper	UHGV-0007687_33	693746.OBV_01780	205.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0007687_33	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
eggNOG-mapper	UHGV-0007687_34	411470.RUMGNA_00195	56.6	0.000000149	N/A	N/A
structural_annotation	UHGV-0007687_34	PF12750,MF_00105,COG0140	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0007687	Yes	27,185	61	70	1
UHGV-0024291	No	26,587	61	68	1
UHGV-1844106	No	10,788	61	28	1