Viral OTU vOTU-024510

vOTU: vOTU-024510

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-024510
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00920 → vGENUS-01002 → vOTU-024510
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1358052
Biosample ID	SAMN07646520
Length	22,451 bps
CheckV Completeness	61.96% (Medium-quality)
CDS Count	37
CDS Density	93.24%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1358052_4	K17680	287.5	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1358052_4	phrog_239	291.9	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358052_4	UniRef90_R6P3P1	1193.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1358052_4	476272.RUMHYD_02834	549.0	0	N/A	N/A
Pfam	UHGV-1358052_4	PF06745	N/A	N/A	KaiC	ATPase
COG	UHGV-1358052_4	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1358052_4	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_5	phrog_2514	88.8	6.6e-26	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1358052_5	445974.CLORAM_02950	114.0	1.42e-28	N/A	N/A
structural_annotation	UHGV-1358052_5	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_7	phrog_3490	129.7	1.7e-38	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358052_7	UniRef90_R6N0P8	327.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358052_7	476272.RUMHYD_01740	204.0	0	ERCC4 domain	N/A
Pfam	UHGV-1358052_7	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1358052_7	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1358052_7	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_8	phrog_18107	80.0	3.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1358052_8	476272.RUMHYD_02831	175.0	0	N/A	N/A
structural_annotation	UHGV-1358052_8	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_10	phrog_2872	213.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358052_10	UniRef90_A0A412AWF4	409.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1358052_10	1345695.CLSA_c30180	249.0	0	AAA domain	N/A
Pfam	UHGV-1358052_10	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1358052_10	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358052_16	1105031.HMPREF1141_1503	46.6	0.000007	N/A	N/A
KOfam	UHGV-1358052_17	K07741	135.0	1.3e-39	antB; anti-repressor protein	N/A
PHROG	UHGV-1358052_17	phrog_130	275.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1358052_17	UniRef90_A0A290FZK7	340.0	0	Roantirepressor	N/A
eggNOG-mapper	UHGV-1358052_17	1123263.AUKY01000072_gene2107	286.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1358052_17	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1358052_17	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1358052_17	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1358052_17	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-1358052_18	K07727	86.2	6.2e-25	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-1358052_18	phrog_38620	40.6	0.000000000041	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358052_18	UniRef90_UPI00118473B2	101.0	6.93e-27	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1358052_18	764562.D7RWM4_9CAUD	86.3	1.86e-21	sequence-specific DNA binding	N/A
Pfam	UHGV-1358052_18	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1358052_18	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1358052_19	K07727	83.3	4.5e-24	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-1358052_19	phrog_38620	61.3	1.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358052_19	UniRef90_UPI000696B62B	133.0	2.92e-36	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1358052_19	1159488.SEQMU2_13765	77.4	0.00000000000000479	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1358052_19	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1358052_19	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1358052_19	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358052_20	UniRef90_A0A1Y3XM81	83.6	1.01e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1358052_20	428125.CLOLEP_02737	93.2	3.32e-24	N/A	N/A
structural_annotation	UHGV-1358052_20	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_21	phrog_8	57.8	2.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358052_21	UniRef90_A0A855A1Q3	170.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1358052_21	428125.CLOLEP_02738	167.0	0	SMART helix-turn-helix domain protein	N/A
Pfam	UHGV-1358052_21	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1358052_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1358052_21	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_22	phrog_87	56.0	6.4e-16	metallo-protease	other
UniRef90	UHGV-1358052_22	UniRef90_A7VVX5	208.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1358052_22	428125.CLOLEP_02739	208.0	0	N/A	N/A
COG	UHGV-1358052_22	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
PHROG	UHGV-1358052_23	phrog_27590	67.2	2.6e-19	N/A	unknown function
UniRef90	UHGV-1358052_23	UniRef90_A0A855A0M4	376.0	0	N/A	N/A
eggNOG-mapper	UHGV-1358052_23	1408303.JNJJ01000047_gene2868	71.6	0.00000000000732	N/A	N/A
Pfam	UHGV-1358052_23	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-1358052_23	PF14020	N/A	N/A	N/A	N/A
KOfam	UHGV-1358052_24	K06400	303.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1358052_24	phrog_95	312.6	0	integrase	integration and excision
UniRef90	UHGV-1358052_24	UniRef90_UPI00093CA09A	613.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1358052_24	1120746.CCNL01000010_gene1415	509.0	0	recombinase activity	N/A
Pfam	UHGV-1358052_24	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1358052_24	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1358052_24	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1358052_24	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1358052_24	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_25	phrog_297	57.9	1.9e-16	holin	lysis
UniRef90	UHGV-1358052_25	UniRef90_A7VT88	185.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1358052_25	428125.CLOLEP_01780	185.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1358052_25	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1358052_25	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1358052_25	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1358052_25	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_26	phrog_1863	83.0	1.7e-24	N/A	unknown function
UniRef90	UHGV-1358052_26	UniRef90_A0A2K9NYV1	87.8	2.84e-21	Holin	N/A
eggNOG-mapper	UHGV-1358052_26	428125.CLOLEP_01781	129.0	1.99e-38	N/A	N/A
KOfam	UHGV-1358052_27	K07273	230.0	0	acm; lysozyme	N/A
PHROG	UHGV-1358052_27	phrog_291	182.7	0	endolysin	lysis
UniRef90	UHGV-1358052_27	UniRef90_A0A1C6ERW8	424.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1358052_27	428125.CLOLEP_00561	425.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1358052_27	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1358052_27	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1358052_27	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1358052_27	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_28	phrog_7121	171.4	0	tail fiber protein	tail
UniRef90	UHGV-1358052_28	UniRef90_A0A1C6HHX6	409.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358052_28	428125.CLOLEP_00172	376.0	0	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-1358052_28	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-1358052_29	phrog_16573	51.8	0.0000000000000093	N/A	unknown function
UniRef90	UHGV-1358052_29	UniRef90_A0A412AXT4	528.0	0	N/A	N/A
eggNOG-mapper	UHGV-1358052_29	428125.CLOLEP_02045	193.0	0	N/A	N/A
Pfam	UHGV-1358052_29	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1358052_30	phrog_1067	413.4	0	minor head protein	head and packaging
UniRef90	UHGV-1358052_30	UniRef90_A0A1C6H6B4	1002.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1358052_30	1123263.AUKY01000068_gene489	430.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1358052_30	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1358052_30	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1358052_30	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1358052_30	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_31	phrog_33	81.4	1.8e-23	distal tail protein Dit	tail
UniRef90	UHGV-1358052_31	UniRef90_A0A1C6H6D2	481.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1358052_31	1160721.RBI_I01575	162.0	0	Phage tail protein	N/A
COG	UHGV-1358052_31	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1358052_31	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_32	phrog_23464	266.7	0	N/A	unknown function
UniRef90	UHGV-1358052_32	UniRef90_A0A1C6H5M9	877.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1358052_32	33035.JPJF01000023_gene3232	255.0	0	phage tail tape measure protein	N/A
COG	UHGV-1358052_32	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1358052_32	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_33	phrog_3033	50.8	0.000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-1358052_33	1280671.AUJH01000012_gene3142	53.5	0.00000000612	N/A	N/A
PHROG	UHGV-1358052_34	phrog_709	117.9	5.6e-35	N/A	unknown function
eggNOG-mapper	UHGV-1358052_34	411471.SUBVAR_05858	137.0	7.73e-40	N/A	N/A
structural_annotation	UHGV-1358052_34	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_35	phrog_88	167.5	0	major tail protein	tail
UniRef90	UHGV-1358052_35	UniRef90_A0A1C6H6F0	343.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1358052_35	1226322.HMPREF1545_00121	188.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1358052_35	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1358052_35	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_36	phrog_78	46.9	0.00000000000051	tail terminator	connector
UniRef90	UHGV-1358052_36	UniRef90_U2SBX3	129.0	9.65e-37	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1358052_36	411471.SUBVAR_05856	146.0	2.24208e-44	N/A	N/A
structural_annotation	UHGV-1358052_36	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1358052_37	phrog_5	58.2	2.5e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-1358052_37	UniRef90_UPI000C7BEE97	163.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1358052_37	411471.SUBVAR_05855	144.0	4.28797e-43	N/A	N/A
Pfam	UHGV-1358052_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1358052_37	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1358052	Yes	22,451	44	62	1
UHGV-0979466	No	17,315	43	48	1
UHGV-1128220	No	10,481	42	29	1