Viral OTU vOTU-025410

vOTU: vOTU-025410

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-025410
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00009 → vOTU-025410
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Bacteroidaceae → Prevotella → Prevotella denticola
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1509947
Biosample ID	SAMEA2737909
Length	52,130 bps
CheckV Completeness	61.60% (Medium-quality)
CDS Count	66
CDS Density	86.16%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1509947_1	1297617.JPJD01000029_gene2394	53.9	0.000000579	N/A	N/A
KOfam	UHGV-1509947_10	K06919	62.0	7.6e-18	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1509947_10	phrog_864	182.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509947_10	UniRef90_A0A095YR56	1026.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1509947_10	1236504.HMPREF2132_11050	1026.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-1509947_10	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1509947_10	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1509947_10	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1509947_10	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1509947_10	PF04735,MF_04000,TIGR01613,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_11	phrog_59	113.2	1.4e-33	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509947_11	UniRef90_UPI001CCC37D7	92.8	2.58e-20	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-1509947_11	1416012.V5UQG0_9CAUD	90.5	2.44e-20	HNH endonuclease	N/A
PADLOC	UHGV-1509947_11	HEase_00016	66.2	1e-18	homing endonuclease	RM
Pfam	UHGV-1509947_11	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1509947_11	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1509947_11	PF07463	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_12	phrog_799	192.8	0	DNA methyltransferase	other
UniRef90	UHGV-1509947_12	UniRef90_A0A096AV30	370.0	0	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-1509947_12	1236504.HMPREF2132_11055	370.0	0	DNA restriction-modification system	N/A
COG	UHGV-1509947_12	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-1509947_12	PF19587,MF_01872,NF011489,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_18	phrog_1365	74.0	1.7e-21	N/A	unknown function
KOfam	UHGV-1509947_20	K03530	46.0	0.00000000000098	hupB; DNA-binding protein HU-beta	N/A
PHROG	UHGV-1509947_20	phrog_379	65.1	8.1e-19	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509947_20	UniRef90_A0A1G6K090	65.9	0.00000000000398	Bacterial nucleoid protein Hbs	N/A
eggNOG-mapper	UHGV-1509947_20	1236504.HMPREF2132_11100	177.0	0	regulation of translation	N/A
Pfam	UHGV-1509947_20	PF00216	N/A	N/A	Bacterial DNA-binding protein	Bac_DNA_binding
COG	UHGV-1509947_20	COG0776	N/A	N/A	Bacterial nucleoid DNA-binding protein IHF-alpha	N/A
structural_annotation	UHGV-1509947_20	PF00216,MF_00381,NF007945,COG0776	N/A	N/A	N/A	N/A
KOfam	UHGV-1509947_21	K01520	128.9	4.4e-38	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1509947_21	phrog_135	118.1	5.2e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509947_21	UniRef90_A0A3B8RBW0	125.0	1.41e-33	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1509947_21	649747.HMPREF0083_02782	94.0	4.75e-22	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1509947_21	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1509947_21	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1509947_21	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_22	phrog_1770	93.1	3e-27	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509947_22	UniRef90_UPI001EDC0C52	125.0	1.15e-33	crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-1509947_22	1236504.HMPREF2132_11115	306.0	0	N/A	N/A
structural_annotation	UHGV-1509947_22	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_23	phrog_236	89.0	9.9e-26	nucleotide kinase	other
UniRef90	UHGV-1509947_23	UniRef90_A0A8B2AZ55	142.0	1.54984e-42	N/A	N/A
eggNOG-mapper	UHGV-1509947_23	1236504.HMPREF2132_11120	151.0	0	N/A	N/A
Pfam	UHGV-1509947_23	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1509947_23	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-1509947_27	K07741	59.8	9.1e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-1509947_27	phrog_130	183.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1509947_27	UniRef90_A0A4S2FP66	246.0	0	Phage repressor protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-1509947_27	445971.ANASTE_00714	204.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1509947_27	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1509947_27	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1509947_27	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1509947_27	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509947_31	1236504.HMPREF2132_11155	376.0	0	N/A	N/A
structural_annotation	UHGV-1509947_31	PF06152,TIGR01641	N/A	N/A	N/A	N/A
KOfam	UHGV-1509947_33	K07741	76.5	8.1e-22	antB; anti-repressor protein	N/A
PHROG	UHGV-1509947_33	phrog_130	125.1	6.3e-37	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1509947_33	UniRef90_A0A3R5XBS7	214.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-1509947_33	1236504.HMPREF2132_11510	188.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1509947_33	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1509947_33	COG3617	N/A	N/A	Prophage antirepressor	N/A
PHROG	UHGV-1509947_36	phrog_64	165.2	0	portal protein	head and packaging
UniRef90	UHGV-1509947_36	UniRef90_A0A8B2AZ47	1030.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1509947_36	1123058.KB894219_gene151	80.1	0.000000000000493	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-1509947_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1509947_36	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_37	phrog_979	156.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1509947_37	UniRef90_UPI0009DF05F5	1306.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1509947_37	1236504.HMPREF2132_11175	893.0	0	Terminase-like family	N/A
Pfam	UHGV-1509947_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1509947_37	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1509947_37	PF04466,PF05203,PF20441,MF_04146,TIGR01547,NF005852,COG4373,COG1372	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509947_39	PF21430	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_40	phrog_29	54.3	0.0000000000000018	major head protein	head and packaging
UniRef90	UHGV-1509947_40	UniRef90_A0A8B2AWS5	703.0	0	Major capsid protein	N/A
Pfam	UHGV-1509947_40	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1509947_40	PF03864,MF_04133,TIGR04387,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509947_41	1236504.HMPREF2132_11200	239.0	0	N/A	N/A
structural_annotation	UHGV-1509947_41	PF20449	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509947_42	PF13437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509947_44	PF06141	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509947_45	1121100.JCM6294_574	52.4	0.0000066	N/A	N/A
structural_annotation	UHGV-1509947_45	PF08813,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509947_46	1236504.HMPREF2132_11225	237.0	0	N/A	N/A
PHROG	UHGV-1509947_47	phrog_9959	141.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1509947_47	UniRef90_A0A8B2AWT2	1715.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509947_47	742727.HMPREF9447_04839	176.0	4.99997e-41	tape measure	N/A
COG	UHGV-1509947_47	COG1511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509947_50	1236504.HMPREF2132_11265	265.0	0	N/A	N/A
structural_annotation	UHGV-1509947_50	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_51	phrog_17422	245.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1509947_51	888743.HMPREF9141_0416	660.0	0	N/A	N/A
structural_annotation	UHGV-1509947_51	PF06605,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_52	phrog_3267	201.5	0	tail protein	tail
UniRef90	UHGV-1509947_52	UniRef90_A0A096AN75	265.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1509947_52	888743.HMPREF9141_0415	492.0	0	N/A	N/A
structural_annotation	UHGV-1509947_52	PF02010,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_53	phrog_31303	63.8	7.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1509947_53	1287476.HMPREF1651_06170	143.0	9.81e-32	cellulase activity	N/A
COG	UHGV-1509947_53	COG4926	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-1509947_55	UniRef90_UPI001C46F9DA	138.0	1.09e-38	phage holin family protein	N/A
eggNOG-mapper	UHGV-1509947_55	1347393.HG726021_gene389	89.4	2.03e-20	N/A	N/A
structural_annotation	UHGV-1509947_55	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1509947_56	K08640	87.2	2.9e-25	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1509947_56	phrog_894	76.3	4.1e-22	endolysin	lysis
UniRef90	UHGV-1509947_56	UniRef90_A0A096B9T9	251.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509947_56	1236504.HMPREF2132_01945	251.0	0	Peptidase M15	N/A
Pfam	UHGV-1509947_56	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1509947_56	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509947_56	PF08291,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509947_57	679190.HMPREF0650_1967	64.7	0.0000000000881	N/A	N/A
structural_annotation	UHGV-1509947_58	PF10694	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509947_59	UniRef90_A0A069QI17	139.0	5.9e-37	Acetyltransferase, GNAT family	N/A
eggNOG-mapper	UHGV-1509947_59	1122991.BAIZ01000025_gene1862	135.0	5.04e-38	N/A	N/A
PHROG	UHGV-1509947_60	phrog_20807	70.1	7.9e-21	N/A	unknown function
structural_annotation	UHGV-1509947_60	PF00684,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_61	phrog_874	80.8	2.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1509947_61	1236504.HMPREF2132_11385	188.0	0	N/A	N/A
structural_annotation	UHGV-1509947_61	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1509947_62	phrog_8684	125.6	2.5e-37	N/A	unknown function
UniRef90	UHGV-1509947_62	UniRef90_A0A3S4X077	214.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-1509947_62	1122989.KB898600_gene64	214.0	0	YopX protein	N/A
Pfam	UHGV-1509947_62	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1509947_62	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1509947_62	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509947_63	PF18358	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509947_65	UniRef90_UPI001C5CF12F	162.0	0	N/A	N/A
Pfam	UHGV-1509947_65	PF16225	N/A	N/A	N/A	DUF4884
KOfam	UHGV-1509947_66	K14415	169.8	0	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	N/A
PHROG	UHGV-1509947_66	phrog_1075	233.7	0	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509947_66	UniRef90_A0A7V6GCU3	221.0	0	RtcB family protein	N/A
eggNOG-mapper	UHGV-1509947_66	398512.JQKC01000002_gene1705	225.0	0	N/A	N/A
Pfam	UHGV-1509947_66	PF01139	N/A	N/A	tRNA-splicing ligase RtcB	RtcB
COG	UHGV-1509947_66	COG1690	N/A	N/A	RNA-splicing ligase RtcB, repairs tRNA damage	N/A
structural_annotation	UHGV-1509947_66	TIGR03073	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1509947	Yes	52,130	50	62	1
UHGV-1468600	No	42,600	51	50	1
UHGV-1647201	No	14,389	55	17	1