Viral OTU vOTU-025845

vOTU: vOTU-025845

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-025845
Number of Genomes	4
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-02294 → vOTU-025845
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp900547475
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1474041
Biosample ID	SAMEA4378312
Length	30,682 bps
CheckV Completeness	61.92% (Medium-quality)
CDS Count	50
CDS Density	93.18%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1474041_1	phrog_3558	306.9	0	tail protein	tail
UniRef90	UHGV-1474041_1	UniRef90_A0A1C6KQ97	505.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1474041_1	1414720.CBYM010000040_gene1657	306.0	0	Phage minor structural protein, N-terminal	N/A
Pfam	UHGV-1474041_1	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1474041_1	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1474041_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1474041_1	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_2	phrog_33	75.5	5e-22	distal tail protein Dit	tail
UniRef90	UHGV-1474041_2	UniRef90_A0A1C6KPN3	478.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1474041_2	1414720.CBYM010000001_gene708	280.0	0	PFAM Phage tail protein	N/A
Pfam	UHGV-1474041_2	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1474041_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1474041_2	PF20195,PF21621,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_3	phrog_991	373.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1474041_3	UniRef90_UPI001F456E2C	931.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1474041_3	536233.CLO_0896	433.0	0	tail tape measure protein	N/A
Pfam	UHGV-1474041_3	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1474041_3	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1474041_3	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1474041_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_4	phrog_17658	120.7	1.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-1474041_4	536233.CLO_0894	198.0	0	N/A	N/A
structural_annotation	UHGV-1474041_4	PF18116	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_5	phrog_706	182.0	0	N/A	unknown function
UniRef90	UHGV-1474041_5	UniRef90_UPI001F1BBF0E	301.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1474041_5	1540257.JQMW01000013_gene734	265.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1474041_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1474041_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_6	phrog_4450	120.6	8.9e-36	N/A	unknown function
UniRef90	UHGV-1474041_6	UniRef90_UPI0018986D97	192.0	0	AP endonuclease	N/A
eggNOG-mapper	UHGV-1474041_6	1280692.AUJL01000004_gene838	126.0	2.64e-36	N/A	N/A
Pfam	UHGV-1474041_6	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-1474041_6	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_7	phrog_3099	183.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1474041_7	1499683.CCFF01000017_gene2569	267.0	0	N/A	N/A
structural_annotation	UHGV-1474041_7	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_8	phrog_3266	146.1	1.09301e-43	tail completion	connector
UniRef90	UHGV-1474041_8	UniRef90_UPI001F261AF5	254.0	0	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1474041_8	1499683.CCFF01000017_gene2570	246.0	0	N/A	N/A
structural_annotation	UHGV-1474041_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_9	phrog_556	85.8	4.1e-25	minor head protein	head and packaging
UniRef90	UHGV-1474041_9	UniRef90_A0A1C6KPK4	203.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1474041_9	1499683.CCFF01000017_gene2571	183.0	0	Minor capsid protein	N/A
Pfam	UHGV-1474041_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1474041_9	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_10	phrog_3366	132.4	2.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-1474041_10	1540257.JQMW01000013_gene739	213.0	0	N/A	N/A
Pfam	UHGV-1474041_10	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1474041_10	PF20536	N/A	N/A	N/A	N/A
UniRef90	UHGV-1474041_11	UniRef90_UPI0013C967CA	101.0	3.47e-26	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1474041_11	1540257.JQMW01000013_gene740	113.0	1.08e-31	N/A	N/A
PHROG	UHGV-1474041_12	phrog_29	234.8	0	major head protein	head and packaging
UniRef90	UHGV-1474041_12	UniRef90_A0A1C6KXX0	623.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1474041_12	1280692.AUJL01000004_gene846	635.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1474041_12	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1474041_12	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_13	phrog_909	85.1	6.9e-25	major head protein	head and packaging
UniRef90	UHGV-1474041_13	UniRef90_UPI001D2572A1	216.0	0	head decoration protein	N/A
eggNOG-mapper	UHGV-1474041_13	1280692.AUJL01000004_gene847	220.0	0	N/A	N/A
PHROG	UHGV-1474041_14	phrog_172	81.2	1.7e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-1474041_14	UniRef90_UPI00097FD426	395.0	0	N/A	N/A
eggNOG-mapper	UHGV-1474041_14	1280692.AUJL01000004_gene848	300.0	0	N/A	N/A
Pfam	UHGV-1474041_14	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1474041_14	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_15	phrog_23707	41.1	0.000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1474041_15	1519439.JPJG01000059_gene1912	55.5	0.000000158	N/A	N/A
structural_annotation	UHGV-1474041_15	PF08325,COG4900	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_17	phrog_115	121.0	1.7e-36	minor head protein	head and packaging
UniRef90	UHGV-1474041_17	UniRef90_UPI00097FE5D2	467.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1474041_17	1499683.CCFF01000017_gene2578	301.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1474041_17	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1474041_17	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1474041_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1474041_17	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_18	phrog_64	315.2	0	portal protein	head and packaging
UniRef90	UHGV-1474041_18	UniRef90_UPI00189BFC5F	804.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1474041_18	1280692.AUJL01000004_gene853	742.0	0	portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1474041_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1474041_18	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_19	phrog_38	204.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1474041_19	UniRef90_UPI001F3F55D5	1102.0	0	terminase	N/A
eggNOG-mapper	UHGV-1474041_19	1415774.U728_1094	983.0	0	chromosome segregation	N/A
Pfam	UHGV-1474041_19	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1474041_19	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1474041_19	PF17289,PF03354,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-1474041_20	K14060	115.5	6.4e-34	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1474041_20	phrog_125	176.1	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1474041_20	UniRef90_UPI001F32B077	370.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1474041_20	1345695.CLSA_c29990	316.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1474041_20	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1474041_20	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1474041_20	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_21	phrog_2538	84.5	1.1e-24	terminase small subunit	head and packaging
UniRef90	UHGV-1474041_21	UniRef90_UPI001EEAB92B	259.0	0	phBC6A51 family helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1474041_21	1540257.JQMW01000013_gene750	142.0	1.67007e-41	N/A	N/A
Pfam	UHGV-1474041_21	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-1474041_21	PF13022,COG3677	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_22	phrog_36	84.8	1.2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1474041_22	UniRef90_A0A1C6KP07	232.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1474041_22	1345695.CLSA_c30010	136.0	3.2e-39	sigma factor activity	N/A
COG	UHGV-1474041_22	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1474041_22	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_23	phrog_5614	51.7	0.000000000000013	N/A	unknown function
UniRef90	UHGV-1474041_23	UniRef90_A0A140GRQ5	116.0	1.12e-29	Putative serine/threonine/tyrosine-interacting protein	N/A
COG	UHGV-1474041_23	COG5350	N/A	N/A	Predicted protein tyrosine phosphatase	N/A
structural_annotation	UHGV-1474041_23	PF00782,COG5350	N/A	N/A	N/A	N/A
KOfam	UHGV-1474041_24	K01520	128.1	7.6e-38	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1474041_24	phrog_135	130.1	1.2e-38	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1474041_24	UniRef90_UPI001F40D267	308.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1474041_24	1582152.A0A0A8WIQ1_9CAUD	132.0	3.38e-37	dUTPase	N/A
Pfam	UHGV-1474041_24	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1474041_24	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
structural_annotation	UHGV-1474041_24	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-1474041_28	K02316	58.8	2.1e-21	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1474041_28	phrog_26824	1040.8	0	N/A	unknown function
UniRef90	UHGV-1474041_28	UniRef90_A0A1C6KP16	1629.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1474041_28	536233.CLO_0520	1041.0	0	DNA primase	N/A
PADLOC	UHGV-1474041_28	drt-cluster192	45.9	0.00000000000003	DRT	DRT
Pfam	UHGV-1474041_28	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1474041_28	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1474041_28	PF01807,PF06048,PF19898,MF_00974,NF005477,COG5519,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_30	phrog_3490	171.5	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1474041_30	UniRef90_A0A1C6KP06	375.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1474041_30	1443122.Z958_05760	240.0	0	ERCC4 domain	N/A
Pfam	UHGV-1474041_30	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1474041_30	PF02732,NF040956	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1474041_33	PF13719	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_34	phrog_424	94.8	1.1e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1474041_34	536233.CLO_1554	424.0	0	sulfate reduction	N/A
PADLOC	UHGV-1474041_34	SspD_00001	40.0	0.0000000001	SspD	SSP
COG	UHGV-1474041_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1474041_34	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1474041_35	1414720.CBYM010000001_gene681	83.2	0.00000000000000215	N/A	N/A
KOfam	UHGV-1474041_36	K03111	107.4	2.2e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1474041_36	phrog_44	121.2	9.4e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1474041_36	UniRef90_UPI00098AA3AF	244.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1474041_36	1414720.CBYM010000010_gene3150	133.0	2.87e-38	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1474041_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1474041_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1474041_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1474041_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1474041_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_38	phrog_21101	53.3	0.0000000000000033	N/A	unknown function
UniRef90	UHGV-1474041_38	UniRef90_UPI001F409708	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-1474041_38	748727.CLJU_c08310	99.0	2.26e-26	N/A	N/A
Pfam	UHGV-1474041_38	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1474041_38	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1474041_38	PF07866,COG4728	N/A	N/A	N/A	N/A
KOfam	UHGV-1474041_39	K03698	62.8	6e-18	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-1474041_39	phrog_28876	133.0	1.8e-39	metal-dependent phosphohydrolase	other
UniRef90	UHGV-1474041_39	UniRef90_A0A1C6KNZ4	390.0	0	3'-5' exoribonuclease YhaM	N/A
eggNOG-mapper	UHGV-1474041_39	931276.Cspa_c26640	214.0	0	PFAM HD domain	N/A
Pfam	UHGV-1474041_39	PF01966	N/A	N/A	HD domain	HD
COG	UHGV-1474041_39	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-1474041_39	PF07514,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_40	phrog_17705	63.5	4.1e-19	N/A	unknown function
PHROG	UHGV-1474041_42	phrog_1227	295.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1474041_42	UniRef90_UPI001F3078C8	458.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1474041_42	1415774.U728_1702	337.0	0	N/A	N/A
Pfam	UHGV-1474041_42	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-1474041_42	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1474041_42	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-1474041_43	K07455	154.9	1.4013e-45	recT; recombination protein RecT	N/A
PHROG	UHGV-1474041_43	phrog_148	140.9	8.29989e-42	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1474041_43	UniRef90_A0A1C6KNQ3	528.0	0	p33	N/A
eggNOG-mapper	UHGV-1474041_43	1415774.U728_1703	336.0	0	RecT family	N/A
Pfam	UHGV-1474041_43	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1474041_43	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1474041_43	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1474041_43	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_44	phrog_10625	51.3	0.000000000000018	N/A	unknown function
structural_annotation	UHGV-1474041_44	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-1474041_45	phrog_4601	48.0	0.00000000000021	N/A	unknown function
Pfam	UHGV-1474041_46	PF00847	N/A	N/A	AP2 domain	AP2
KOfam	UHGV-1474041_50	K18830	63.4	4.5e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1474041_50	phrog_8	48.4	0.0000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-1474041_50	UniRef90_A0A1C6JIL6	219.0	0	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-1474041_50	1414720.CBYM010000002_gene594	102.0	1.5e-26	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1474041_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1474041_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1474041_50	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1474041	Yes	30,682	30	62	1
UHGV-0114720	No	30,682	30	62	1
UHGV-1646833	No	14,457	30	29	1
UHGV-1560852	No	11,441	30	25	1