Viral OTU vOTU-028765

vOTU: vOTU-028765

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-028765
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vOTU-028765
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-314 → Fimimonas → Fimimonas sp003537755
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0024617
Biosample ID	SAMEA4765641
Length	41,446 bps
CheckV Completeness	61.58% (Medium-quality)
CDS Count	63
CDS Density	93.72%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0024617_6	445972.ANACOL_01884	56.6	0.0000000136	N/A	N/A
UniRef90	UHGV-0024617_8	UniRef90_A0A345BNU6	56.6	0.000000202	Spore surface glycoprotein	N/A
structural_annotation	UHGV-0024617_8	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0024617_9	phrog_16490	46.4	0.00000000000077	N/A	unknown function
eggNOG-mapper	UHGV-0024617_9	641112.ACOK01000103_gene525	84.3	2.38e-17	N/A	N/A
PHROG	UHGV-0024617_10	phrog_3377	202.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024617_10	UniRef90_C9KJA8	189.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0024617_10	500635.MITSMUL_03105	189.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
COG	UHGV-0024617_10	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
Pfam	UHGV-0024617_14	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
PHROG	UHGV-0024617_21	phrog_31460	45.2	0.0000000000016	tail protein	tail
eggNOG-mapper	UHGV-0024617_21	1201288.M900_2187	70.5	0.00000000128	YadA-like membrane anchor domain	N/A
COG	UHGV-0024617_21	COG3210	N/A	N/A	Large exoprotein involved in heme utilization or adhesion	N/A
structural_annotation	UHGV-0024617_26	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024617_27	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0024617_28	phrog_9483	53.9	0.0000000000000022	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0024617_28	1176423.I6S2X0_9VIRU	67.0	0.00000000814	N/A	N/A
structural_annotation	UHGV-0024617_28	TIGR01760,COG5280	N/A	N/A	N/A	N/A
Pfam	UHGV-0024617_34	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
PHROG	UHGV-0024617_36	phrog_10	127.3	1.5e-37	major head protein	head and packaging
UniRef90	UHGV-0024617_36	UniRef90_A0A096AZU3	229.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0024617_36	742738.HMPREF9460_04071	229.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0024617_36	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0024617_36	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0024617_36	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0024617_36	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_37	K01358	130.4	2e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0024617_37	phrog_94	225.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0024617_37	UniRef90_A0A151B7G9	169.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0024617_37	1234664.AMRO01000024_gene1807	166.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-0024617_37	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0024617_37	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0024617_37	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0024617_38	phrog_12	295.9	0	portal protein	head and packaging
UniRef90	UHGV-0024617_38	UniRef90_A0A1Y4L2Q1	253.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0024617_38	536232.CLM_2933	211.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0024617_38	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0024617_38	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0024617_38	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0024617_38	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0024617_39	phrog_9	266.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0024617_39	UniRef90_A0A4V0Y190	417.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0024617_39	1262914.BN533_00200	386.0	0	terminase, large subunit	N/A
Pfam	UHGV-0024617_39	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0024617_39	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0024617_39	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0024617_39	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_40	K00571	126.5	2.7e-37	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0024617_40	phrog_23224	89.3	1.1e-26	DNA methyltransferase	other
UniRef90	UHGV-0024617_40	UniRef90_A0A3R6JG61	181.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0024617_40	981335.G4W934_9CAUD	163.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0024617_40	MTase_II_00172	87.7	2e-25	Type II methyltransferase	RM
Pfam	UHGV-0024617_40	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-0024617_40	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
Pfam	UHGV-0024617_41	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
KOfam	UHGV-0024617_43	K00571	155.0	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0024617_43	phrog_67	141.5	1.59748e-43	DNA methyltransferase	other
UniRef90	UHGV-0024617_43	UniRef90_A0A3E3E030	281.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0024617_43	469596.HMPREF9488_00879	189.0	0	DNA methylase	N/A
PADLOC	UHGV-0024617_43	MTase_II_00157	149.3	1.96182e-44	Type II methyltransferase	RM
Pfam	UHGV-0024617_43	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0024617_43	COG2189	N/A	N/A	Adenine specific DNA methylase Mod	N/A
structural_annotation	UHGV-0024617_43	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_44	K00390	70.8	1.5e-20	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0024617_44	phrog_424	117.9	7.6e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0024617_44	UniRef90_R9ITQ7	160.0	6.86636e-44	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0024617_44	397291.C804_05723	160.0	1.12104e-44	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0024617_44	BrxP_00001	68.0	2.1e-20	BrxP	BREX
Pfam	UHGV-0024617_44	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0024617_44	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0024617_44	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_45	K07451	43.6	0.0000000000055	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0024617_45	phrog_144	80.2	2.9e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024617_45	UniRef90_A0A218MNA6	115.0	4.67e-31	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0024617_45	1403946.Q615_SPAC00113G0111	110.0	9.05e-30	HNH nucleases	N/A
Pfam	UHGV-0024617_45	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0024617_45	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0024617_45	PF01844,COG1403	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_46	K06919	89.8	3e-26	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0024617_46	phrog_1829	771.0	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024617_46	UniRef90_A0A3D2MTX0	805.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0024617_46	1347392.CCEZ01000005_gene1217	638.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0024617_46	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0024617_46	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0024617_46	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0024617_46	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0024617_46	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0024617_46	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
COG	UHGV-0024617_48	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
structural_annotation	UHGV-0024617_48	PF04606,NF007241	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024617_50	MF_01302_B	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_54	K18959	199.2	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-0024617_54	phrog_16	201.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024617_54	UniRef90_A0A3D2MTJ6	419.0	0	DNA or RNA helicase of superfamily II	N/A
eggNOG-mapper	UHGV-0024617_54	1449050.JNLE01000003_gene3908	322.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-0024617_54	mREase_IV_00004	75.6	5.1e-22	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0024617_54	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0024617_54	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0024617_54	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0024617_54	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024617_55	1232453.BAIF02000010_gene3342	78.6	9.1e-17	Recombination protein U	N/A
structural_annotation	UHGV-0024617_55	PF03838,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_56	K00558	129.2	2.4e-38	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0024617_56	phrog_116	135.0	3.30006e-41	DNA methyltransferase	other
UniRef90	UHGV-0024617_56	UniRef90_A0A371JBS1	306.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0024617_56	397290.C810_05213	252.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0024617_56	MTase_II_00174	148.9	0	Type II methyltransferase	RM
Pfam	UHGV-0024617_56	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0024617_56	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0024617_56	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0024617_56	PF00145,MF_02100,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0024617_57	K03111	77.0	4e-22	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0024617_57	phrog_44	81.7	1.3e-23	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024617_57	UniRef90_A0A3D5ZN53	75.5	0.0000000000000106	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0024617_57	596323.HMPREF0554_0748	67.8	0.00000000000162	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0024617_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0024617_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0024617_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0024617_57	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0024617_60	phrog_21613	85.6	5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0024617_60	1120998.AUFC01000030_gene2214	138.0	3.01e-39	N/A	N/A
PHROG	UHGV-0024617_61	phrog_1227	223.5	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024617_61	UniRef90_A0A1V6B6A2	270.0	0	N/A	N/A
eggNOG-mapper	UHGV-0024617_61	1120998.AUFC01000030_gene2216	223.0	0	N/A	N/A
Pfam	UHGV-0024617_61	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0024617_61	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0024617_61	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0024617	Yes	41,446	44	62	1
UHGV-0174544	No	23,671	44	43	1
UHGV-0192237	No	23,647	44	43	1