Viral OTU vOTU-029049

vOTU: vOTU-029049

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-029049
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00079 → vGENUS-00402 → vOTU-029049
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0178986
Biosample ID	SAMN09781738
Length	36,056 bps
CheckV Completeness	88.32% (Medium-quality)
CDS Count	61
CDS Density	94.52%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0178986_1	1226322.HMPREF1545_00079	67.0	0.000000000000907	N/A	N/A
structural_annotation	UHGV-0178986_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_3	phrog_20016	194.0	0	N/A	unknown function
UniRef90	UHGV-0178986_3	UniRef90_A0A285PT46	199.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0178986_3	1226322.HMPREF1545_00077	174.0	0	N/A	N/A
structural_annotation	UHGV-0178986_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_4	phrog_16490	160.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0178986_4	1408437.JNJN01000043_gene803	64.3	0.00000000179	N/A	N/A
PHROG	UHGV-0178986_5	phrog_22984	69.1	1.8e-21	N/A	unknown function
PHROG	UHGV-0178986_6	phrog_21718	109.0	3.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0178986_6	397290.C810_05210	87.4	1.46e-19	N/A	N/A
PHROG	UHGV-0178986_7	phrog_3754	95.0	8.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0178986_7	476272.RUMHYD_01764	149.0	7.00649e-45	N/A	N/A
KOfam	UHGV-0178986_8	K02479	41.8	0.000000000017	K02479; two-component system, NarL family, response regulator	N/A
Pfam	UHGV-0178986_8	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0178986_8	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0178986_8	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_9	phrog_13256	55.8	5.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0178986_9	1226322.HMPREF1545_00166	52.8	0.0000000301	N/A	N/A
UniRef90	UHGV-0178986_10	UniRef90_UPI00102F4BEE	55.8	0.0000000703	CTP synthase	N/A
eggNOG-mapper	UHGV-0178986_10	1042156.CXIVA_01580	63.2	0.0000000000338	N/A	N/A
KOfam	UHGV-0178986_11	K07273	128.8	6.3e-38	acm; lysozyme	N/A
PHROG	UHGV-0178986_11	phrog_291	94.9	8.9e-28	endolysin	lysis
UniRef90	UHGV-0178986_11	UniRef90_A0A1Q6T343	458.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178986_11	877424.ATWC01000009_gene1193	125.0	6.43e-28	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0178986_11	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0178986_11	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0178986_11	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0178986_11	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_13	phrog_32509	40.3	0.000000000049	N/A	unknown function
eggNOG-mapper	UHGV-0178986_13	476272.RUMHYD_00002	101.0	4.93e-19	N/A	N/A
structural_annotation	UHGV-0178986_13	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_16	phrog_9534	135.9	3.9e-40	head protein	head and packaging
UniRef90	UHGV-0178986_16	UniRef90_A0A0E0TFT0	86.7	9.12e-16	Phage-related putative tail protein	N/A
eggNOG-mapper	UHGV-0178986_16	431943.CKL_4054	91.7	1.92e-17	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0178986_17	phrog_538	111.7	6.8e-33	minor tail protein	tail
UniRef90	UHGV-0178986_17	UniRef90_UPI001C113FEF	231.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0178986_17	665956.HMPREF1032_02940	94.0	9.41e-19	N/A	N/A
Pfam	UHGV-0178986_17	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0178986_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_18	phrog_33	53.3	0.0000000000000068	distal tail protein Dit	tail
UniRef90	UHGV-0178986_18	UniRef90_UPI001C0FCFFA	260.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0178986_18	1033737.CAEV01000029_gene285	91.7	9.54e-19	Phage tail protein	N/A
COG	UHGV-0178986_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0178986_18	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_19	phrog_1272	353.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0178986_19	UniRef90_A0A6N8JML2	314.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0178986_19	411483.FAEPRAA2165_01911	373.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0178986_19	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0178986_19	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0178986_19	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0178986_19	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_21	phrog_18646	53.4	0.0000000000000044	N/A	unknown function
PHROG	UHGV-0178986_22	phrog_885	73.0	3.6e-21	major tail protein	tail
UniRef90	UHGV-0178986_22	UniRef90_A0A843J9F0	188.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0178986_22	1504822.CCNO01000012_gene492	216.0	0	N/A	N/A
structural_annotation	UHGV-0178986_22	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178986_23	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_24	phrog_17977	83.1	2.5e-24	N/A	unknown function
UniRef90	UHGV-0178986_24	UniRef90_UPI00141211AB	90.9	3.01e-21	head-tail adaptor protein	N/A
structural_annotation	UHGV-0178986_24	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_27	phrog_544	298.6	0	major head protein	head and packaging
UniRef90	UHGV-0178986_27	UniRef90_UPI0019576143	397.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0178986_27	411471.SUBVAR_06940	384.0	0	N/A	N/A
NCBIFam	UHGV-0178986_27	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0178986_27	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_28	phrog_194	55.5	0.0000000000000012	head scaffolding protein	head and packaging
UniRef90	UHGV-0178986_28	UniRef90_A0A6B9SU02	106.0	3.38e-25	Fibronectin autolysin	N/A
structural_annotation	UHGV-0178986_28	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_29	phrog_478	125.5	2.5e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0178986_29	UniRef90_A0A373Q857	167.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0178986_29	1111121.HMPREF1247_0834	96.7	5.98e-24	N/A	N/A
PHROG	UHGV-0178986_30	phrog_5	77.0	3.7e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-0178986_30	UniRef90_A0A7X5E1T2	193.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0178986_30	1280685.AUKC01000004_gene1630	108.0	2.03e-28	N/A	N/A
Pfam	UHGV-0178986_30	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0178986_30	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0178986_30	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_32	phrog_115	114.7	4.2e-34	minor head protein	head and packaging
UniRef90	UHGV-0178986_32	UniRef90_A0A7X5E1T7	418.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0178986_32	1111121.HMPREF1247_0797	167.0	3.14031e-42	cell adhesion	N/A
Pfam	UHGV-0178986_32	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0178986_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178986_32	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_34	phrog_64	171.9	0	portal protein	head and packaging
UniRef90	UHGV-0178986_34	UniRef90_UPI0018A8A301	595.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0178986_34	673376.F2VHW1_9CAUD	204.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0178986_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0178986_34	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0178986_35	K06909	397.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0178986_35	phrog_3717	159.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0178986_35	UniRef90_UPI001C3B9235	628.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0178986_35	411471.SUBVAR_06507	577.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0178986_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0178986_35	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0178986_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0178986_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0178986_35	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_37	phrog_842	43.8	0.000000000004	beta-glucosyl-HMC-alpha-glucosyltransferase	other
Pfam	UHGV-0178986_37	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
KOfam	UHGV-0178986_38	K03497	61.3	1.1e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0178986_38	phrog_620	157.8	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178986_38	UniRef90_UPI001E2E3568	152.0	1.13505e-43	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0178986_38	12402.Q708N6_9CAUD	143.0	3.34e-38	N-methyltransferase activity	N/A
PADLOC	UHGV-0178986_38	MTase_II_00015	100.2	3.7e-29	Type II methyltransferase	RM
Pfam	UHGV-0178986_38	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
structural_annotation	UHGV-0178986_38	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_39	phrog_419	79.5	7.4e-25	N/A	unknown function
UniRef90	UHGV-0178986_39	UniRef90_A0A1L5L3J8	105.0	1.25e-27	PGDYG protein (Fragment)	N/A
eggNOG-mapper	UHGV-0178986_39	203119.Cthe_2457	106.0	4.37e-29	N/A	N/A
PHROG	UHGV-0178986_40	phrog_36	74.2	2.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0178986_40	UniRef90_A0A8J6J9G8	52.4	0.00000906	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0178986_40	658655.HMPREF0988_02569	50.4	0.00000829	sigma factor activity	N/A
Pfam	UHGV-0178986_40	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0178986_40	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0178986_40	PF04545,PF18323,MF_00674,NF009172,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_41	phrog_924	51.4	0.000000000000023	N/A	unknown function
UniRef90	UHGV-0178986_41	UniRef90_A0A4R4IL87	54.7	0.0000000446	N/A	N/A
Pfam	UHGV-0178986_41	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0178986_41	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_44	phrog_9958	96.4	2.3e-28	N/A	unknown function
UniRef90	UHGV-0178986_44	UniRef90_UPI001D08A241	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0178986_44	1160721.RBI_I01591	118.0	5.13e-31	N/A	N/A
structural_annotation	UHGV-0178986_44	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_45	phrog_424	111.4	9.3e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0178986_45	UniRef90_R6PFX4	428.0	0	Putative phage reductase	N/A
eggNOG-mapper	UHGV-0178986_45	1378168.N510_03347	73.6	0.0000000000015	N/A	N/A
PADLOC	UHGV-0178986_45	SspD_00001	57.7	4.4e-16	SspD	SSP
Pfam	UHGV-0178986_45	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0178986_45	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0178986_45	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0178986_52	K01160	59.9	7.9e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0178986_52	phrog_34	65.2	1.2e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178986_52	UniRef90_UPI0018ABA1B6	150.0	1.68156e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0178986_52	875454.BAEW01000002_gene491	108.0	1.3e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0178986_52	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0178986_52	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0178986_52	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0178986_55	K02314	206.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0178986_55	phrog_19	195.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178986_55	UniRef90_A0A316NVS3	233.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0178986_55	1203606.HMPREF1526_01325	140.0	1.84e-34	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0178986_55	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0178986_55	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0178986_55	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0178986_55	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_56	phrog_15768	96.9	2.5e-28	N/A	unknown function
UniRef90	UHGV-0178986_56	UniRef90_F2JQT3	103.0	2.01e-23	Phage regulatory protein	N/A
eggNOG-mapper	UHGV-0178986_56	886379.AEWI01000001_gene1766	152.0	3.1249e-43	N/A	N/A
structural_annotation	UHGV-0178986_56	PF09681,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_57	phrog_4973	67.1	2.6e-19	N/A	unknown function
UniRef90	UHGV-0178986_57	UniRef90_A0A3D3Y5F2	68.2	0.000000000000165	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0178986_57	584708.Apau_1668	53.1	0.000000044	Helix-turn-helix domain	N/A
Pfam	UHGV-0178986_57	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0178986_57	PF14090,TIGR00373,COG4738	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178986_58	1203606.HMPREF1526_00240	156.0	0	N/A	N/A
PHROG	UHGV-0178986_59	phrog_18107	71.5	1.5e-20	N/A	unknown function
UniRef90	UHGV-0178986_59	UniRef90_UPI00058F46CC	108.0	1.08e-26	N/A	N/A
eggNOG-mapper	UHGV-0178986_59	903814.ELI_1274	174.0	0	N/A	N/A
structural_annotation	UHGV-0178986_59	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0178986_60	phrog_2872	241.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178986_60	UniRef90_A0A8J6JIF1	273.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0178986_60	754027.HMPREF9554_00709	228.0	0	N/A	N/A
Pfam	UHGV-0178986_60	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0178986_60	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0178986	Yes	36,056	50	88	1
UHGV-0192089	No	27,392	50	67	1