Viral OTU vOTU-029475

vOTU: vOTU-029475

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-029475
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00226 → vSUBFAM-01583 → vOTU-029475
Host Lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → Paludibacteraceae → RF16
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0017089
Biosample ID	N/A
Length	51,577 bps
CheckV Completeness	77.32% (Medium-quality)
CDS Count	67
CDS Density	88.95%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0017089_3	phrog_15043	40.8	0.000000000035	N/A	unknown function
PHROG	UHGV-0017089_4	phrog_21668	48.7	0.00000000000011	N/A	unknown function
structural_annotation	UHGV-0017089_9	PF10922	N/A	N/A	N/A	N/A
KOfam	UHGV-0017089_10	K00390	67.3	2.4e-19	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0017089_10	phrog_424	109.9	2.1e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0017089_10	UniRef90_A0A3N2NAZ8	292.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0017089_10	357276.EL88_11445	165.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0017089_10	BrxP_00001	59.5	1.6e-17	BrxP	BREX
Pfam	UHGV-0017089_10	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0017089_10	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0017089_10	PF01507,MF_00064,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_13	phrog_11619	136.2	1.3e-40	DNA methyltransferase	other
UniRef90	UHGV-0017089_13	UniRef90_A0A6M3L0X0	220.0	0	Putative methyltransferase	N/A
eggNOG-mapper	UHGV-0017089_13	1123309.AQYB01000007_gene1893	165.0	0	ribosomal rna small subunit methyltransferase	N/A
COG	UHGV-0017089_13	COG0742	N/A	N/A	16S rRNA G966 N2-methylase RsmD	N/A
structural_annotation	UHGV-0017089_13	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_14	phrog_59	128.9	1.3e-38	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017089_14	UniRef90_UPI000705333A	115.0	1.09e-28	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0017089_14	767806.D7PQ37_9CAUD	106.0	2.42e-26	HNH endonuclease	N/A
PADLOC	UHGV-0017089_14	HEase_00016	69.5	1.1e-19	homing endonuclease	RM
Pfam	UHGV-0017089_14	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0017089_14	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-0017089_15	phrog_874	91.2	1.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0017089_15	563008.HMPREF0665_02420	176.0	0	N/A	N/A
structural_annotation	UHGV-0017089_15	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017089_22	PF07106,MF_01819,NF041413,COG5625	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017089_23	UniRef90_A0A3N5QWI6	54.3	0.00000144	N/A	N/A
eggNOG-mapper	UHGV-0017089_23	1168034.FH5T_04325	55.5	0.0000000825	COG NOG19098 non supervised orthologous group	N/A
Pfam	UHGV-0017089_23	PF11325	N/A	N/A	N/A	DUF3127
COG	UHGV-0017089_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
PHROG	UHGV-0017089_24	phrog_72	52.3	0.0000000000000097	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-0017089_24	NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_27	phrog_19299	185.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0017089_27	UniRef90_UPI000E449621	560.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0017089_27	1121097.JCM15093_2717	267.0	0	SNF2 family N-terminal domain	N/A
Pfam	UHGV-0017089_27	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0017089_27	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0017089_27	PF05203,PF13479,MF_01420,MF_00350,NF005852,TIGR01618,COG1372	N/A	N/A	N/A	N/A
Pfam	UHGV-0017089_28	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
UniRef90	UHGV-0017089_32	UniRef90_UPI000668E03B	65.5	0.0000000000478	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0017089_32	657309.BXY_08820	56.2	0.0000000403	N/A	N/A
structural_annotation	UHGV-0017089_32	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017089_33	UniRef90_A0A1C5NTT2	61.2	0.00000000228	Helix-turn-helix domain	N/A
COG	UHGV-0017089_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0017089_33	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0017089_34	K15359	68.3	2e-20	hspA; 6-hydroxy-3-succinoylpyridine 3-monooxygenase [EC:1.14.13.163]	N/A
PHROG	UHGV-0017089_34	phrog_7929	89.4	4.3e-26	N/A	unknown function
UniRef90	UHGV-0017089_34	UniRef90_UPI0018E0DDF1	299.0	0	NYN domain-containing protein	N/A
eggNOG-mapper	UHGV-0017089_34	203275.BFO_0282	297.0	0	NYN domain	N/A
Pfam	UHGV-0017089_34	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-0017089_34	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-0017089_34	PF01936,MF_04140,TIGR00288,COG1432	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017089_35	UniRef90_A0A0E2M228	121.0	5.78e-33	Toxin-antitoxin system, antitoxin component, HicB family	N/A
eggNOG-mapper	UHGV-0017089_35	1227266.HMPREF1551_01065	119.0	1.25e-32	N/A	N/A
Pfam	UHGV-0017089_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0017089_35	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0017089_35	PF21748,NF041951,COG1598	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_46	phrog_14770	306.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0017089_46	1227276.HMPREF9148_00165	310.0	0	helicase superfamily c-terminal domain	N/A
Pfam	UHGV-0017089_46	PF18809	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	PBECR1
Pfam	UHGV-0017089_46	PF18763	N/A	N/A	ddrB-like ParB superfamily domain	ddrB-ParB
Pfam	UHGV-0017089_46	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
Pfam	UHGV-0017089_46	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0017089_46	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
PHROG	UHGV-0017089_49	phrog_38407	79.9	1.7e-23	N/A	unknown function
UniRef90	UHGV-0017089_49	UniRef90_A0A2V2D167	445.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0017089_49	742726.HMPREF9448_00774	467.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-0017089_49	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0017089_49	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_52	phrog_26635	78.1	6.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0017089_52	679935.Alfi_2712	100.0	6.28e-20	N/A	N/A
structural_annotation	UHGV-0017089_52	PF17236,MF_04133,TIGR01554,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0017089_54	742726.HMPREF9448_00702	58.5	0.000000101	N/A	N/A
structural_annotation	UHGV-0017089_54	PF17212	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017089_56	PF09067	N/A	N/A	N/A	N/A
KOfam	UHGV-0017089_61	K08640	107.4	1.9e-31	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0017089_61	phrog_894	101.2	1.1e-29	endolysin	lysis
UniRef90	UHGV-0017089_61	UniRef90_A0A2T4T6J3	138.0	3.68e-39	Peptidase M15	N/A
eggNOG-mapper	UHGV-0017089_61	1401078.HMPREF2140_09750	130.0	5.41e-37	Peptidase M15	N/A
Pfam	UHGV-0017089_61	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0017089_61	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017089_61	PF08291,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_62	phrog_17560	63.9	2.6e-18	N/A	unknown function
UniRef90	UHGV-0017089_62	UniRef90_A5ZE38	173.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0017089_62	411901.BACCAC_01149	173.0	0	N/A	N/A
structural_annotation	UHGV-0017089_62	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_64	phrog_3996	55.1	0.000000000000001	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0017089_64	UniRef90_UPI001D076664	72.4	0.000000000000161	N/A	N/A
eggNOG-mapper	UHGV-0017089_64	555500.I215_01893	50.4	0.0000062	N/A	N/A
structural_annotation	UHGV-0017089_64	PF10097,COG5346	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_65	phrog_824	126.5	9.8e-38	N/A	unknown function
UniRef90	UHGV-0017089_65	UniRef90_A0A1I5SYK4	93.2	1.23e-21	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0017089_65	1235792.C808_00622	83.6	1.52e-17	VRR_NUC	N/A
Pfam	UHGV-0017089_65	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0017089_65	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0017089_66	phrog_156	169.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0017089_66	742817.HMPREF9449_01798	312.0	0	N/A	N/A
structural_annotation	UHGV-0017089_66	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0017089	Yes	51,577	45	77	1
UHGV-0021353	No	31,799	46	55	1