Viral OTU vOTU-029584

vOTU: vOTU-029584

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-029584
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00469 → vGENUS-06670 → vOTU-029584
Host Lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Parasutterella → Parasutterella gallistercoris
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1514743
Biosample ID	SAMEA2737772
Length	38,391 bps
CheckV Completeness	86.64% (Medium-quality)
CDS Count	51
CDS Density	93.98%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 86.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1514743_1	UniRef90_A0A5B3FNV2	114.0	3.49e-32	KTSC domain-containing protein	N/A
structural_annotation	UHGV-1514743_1	PF13619	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_2	phrog_2164	73.2	3e-21	N/A	unknown function
eggNOG-mapper	UHGV-1514743_2	1260356.D920_00267	63.9	0.0000000000673	N/A	N/A
eggNOG-mapper	UHGV-1514743_3	469610.HMPREF0189_01154	59.7	0.00000000132	N/A	N/A
eggNOG-mapper	UHGV-1514743_4	762966.HMPREF9439_00996	67.4	0.00000000000197	N/A	N/A
eggNOG-mapper	UHGV-1514743_5	762966.HMPREF9439_00996	68.9	0.000000000000404	N/A	N/A
PHROG	UHGV-1514743_10	phrog_253	103.8	1.6e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514743_10	UniRef90_B6CXH7	60.5	0.0000000181	Gp157	N/A
eggNOG-mapper	UHGV-1514743_10	742823.HMPREF9465_00905	85.5	7.68e-19	Siphovirus Gp157	N/A
Pfam	UHGV-1514743_10	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1514743_10	PF05565,NF002139	N/A	N/A	N/A	N/A
KOfam	UHGV-1514743_11	K03111	152.3	4.2039e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1514743_11	phrog_44	129.7	2.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514743_11	UniRef90_F3QNN6	149.0	1.90577e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1514743_11	469610.HMPREF0189_01394	149.0	3.22299e-44	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1514743_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1514743_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1514743_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1514743_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1514743_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_12	phrog_155	114.3	9.5e-34	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514743_12	UniRef90_A0A6J5P0M3	87.0	3.16e-17	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1514743_12	1207076.ALAT01000105_gene1941	83.6	5.08e-17	ERF superfamily	N/A
Pfam	UHGV-1514743_12	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1514743_12	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-1514743_16	UniRef90_A0A3D3SJ30	134.0	6.45e-39	Transcriptional regulator	N/A
PHROG	UHGV-1514743_18	phrog_5018	48.0	0.00000000000015	N/A	unknown function
UniRef90	UHGV-1514743_18	UniRef90_UPI0012BB7DC3	591.0	0	group I intron-associated PD-(D/E)XK endonuclease	N/A
Pfam	UHGV-1514743_18	PF11645	N/A	N/A	PD-(D/E)XK endonuclease	PDDEXK_5
KOfam	UHGV-1514743_19	K01356	53.1	0.0000000000000076	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1514743_19	phrog_4	81.5	1.4e-23	transcriptional repressor	transcription regulation
UniRef90	UHGV-1514743_19	UniRef90_UPI001563F13C	347.0	0	S24 family peptidase	N/A
eggNOG-mapper	UHGV-1514743_19	469610.HMPREF0189_01170	293.0	0	Peptidase S24-like	N/A
Pfam	UHGV-1514743_19	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1514743_19	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1514743_19	PF00717,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_20	phrog_5810	78.2	9.3e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1514743_20	UniRef90_UPI001C3EDC4A	119.0	8.35e-28	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1514743_20	557598.LHK_01505	70.1	0.00000000000512	N/A	N/A
Pfam	UHGV-1514743_20	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1514743_20	PF13730,MF_01819,TIGR01610,COG5529	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1514743_24	762966.HMPREF9439_01020	97.1	6.01e-25	N/A	N/A
PHROG	UHGV-1514743_27	phrog_244	71.4	1.5e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1514743_27	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1514743_28	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-1514743_29	K07474	81.6	2e-23	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1514743_29	phrog_51	88.1	1.1e-25	terminase small subunit	head and packaging
UniRef90	UHGV-1514743_29	UniRef90_UPI0012BCC981	86.7	1.28e-18	terminase small subunit	N/A
eggNOG-mapper	UHGV-1514743_29	1095747.HMPREF1049_1836	55.1	0.000000349	Terminase small subunit	N/A
Pfam	UHGV-1514743_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1514743_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1514743_29	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1514743_30	K06909	51.4	0.000000000000013	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1514743_30	phrog_5902	249.3	0	N/A	unknown function
UniRef90	UHGV-1514743_30	UniRef90_UPI0012BCF9F6	1021.0	0	terminase	N/A
eggNOG-mapper	UHGV-1514743_30	665942.HMPREF1022_00139	444.0	0	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD	N/A
COG	UHGV-1514743_30	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1514743_30	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1514743_31	UniRef90_UPI0012BC2332	283.0	0	GNAT family N-acetyltransferase	N/A
eggNOG-mapper	UHGV-1514743_31	1072685.IX83_07115	93.6	2.55e-22	Acetyltransferase (GNAT) family	N/A
Pfam	UHGV-1514743_31	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
COG	UHGV-1514743_31	COG3375	N/A	N/A	Predicted acetyltransferase, GNAT superfamily	N/A
Pfam	UHGV-1514743_32	PF05680	N/A	N/A	ATP synthase E chain	ATP-synt_E
PHROG	UHGV-1514743_33	phrog_332	468.6	0	head-tail adaptor	connector
UniRef90	UHGV-1514743_33	UniRef90_UPI0012BC467D	887.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1514743_33	194699.PORTL_BPBPP	435.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1514743_33	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1514743_33	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_34	phrog_528	49.9	0.000000000000035	N/A	unknown function
PHROG	UHGV-1514743_35	phrog_458	148.3	5.74532e-44	protease	other
UniRef90	UHGV-1514743_35	UniRef90_UPI0013EFD20D	119.0	8.48e-30	protease	N/A
eggNOG-mapper	UHGV-1514743_35	557598.LHK_01541	106.0	1.1e-25	N/A	N/A
PHROG	UHGV-1514743_36	phrog_212	49.2	1.4e-22	major head protein	head and packaging
UniRef90	UHGV-1514743_36	UniRef90_Q775C7	143.0	1.51e-36	Bbp17	N/A
eggNOG-mapper	UHGV-1514743_36	194699.Q775C7_BPBPP	143.0	2.53e-37	viral capsid	N/A
Pfam	UHGV-1514743_36	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1514743_36	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_37	phrog_427	86.2	3.1e-25	N/A	unknown function
UniRef90	UHGV-1514743_37	UniRef90_Q775C8	70.5	0.000000000000739	Bbp16	N/A
eggNOG-mapper	UHGV-1514743_37	194699.Q775C8_BPBPP	70.5	0.000000000000124	N/A	N/A
Pfam	UHGV-1514743_37	PF21190	N/A	N/A	Bbp16	Bbp16
structural_annotation	UHGV-1514743_37	PF21190,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_38	phrog_394	120.7	9.1e-36	tail protein	tail
eggNOG-mapper	UHGV-1514743_38	557598.LHK_01545	122.0	3.59e-32	N/A	N/A
structural_annotation	UHGV-1514743_38	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_39	phrog_376	439.4	0	tail protein	tail
UniRef90	UHGV-1514743_39	UniRef90_A0A6F8VDG3	608.0	0	N/A	N/A
eggNOG-mapper	UHGV-1514743_39	557598.LHK_01546	709.0	0	N/A	N/A
structural_annotation	UHGV-1514743_39	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_40	phrog_418	48.8	0.0000000000001	internal virion protein	head and packaging
UniRef90	UHGV-1514743_40	UniRef90_A0A6F8VD79	86.7	3.28e-17	N/A	N/A
eggNOG-mapper	UHGV-1514743_40	557598.LHK_01551	72.4	0.00000000000133	N/A	N/A
structural_annotation	UHGV-1514743_40	PF07321,COG5034	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_41	phrog_873	115.2	5.2e-34	endolysin	head and packaging
eggNOG-mapper	UHGV-1514743_41	1380394.JADL01000008_gene3752	97.8	7.99e-21	N/A	N/A
structural_annotation	UHGV-1514743_41	MF_04122	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_42	phrog_9880	221.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1514743_42	557598.LHK_01554	162.0	4.73e-37	purine ribonucleoside salvage	N/A
Pfam	UHGV-1514743_42	PF18763	N/A	N/A	ddrB-like ParB superfamily domain	ddrB-ParB
Pfam	UHGV-1514743_42	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-1514743_42	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-1514743_42	PF18763,PF18814	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_43	phrog_684	596.3	0	virion structural protein	head and packaging
UniRef90	UHGV-1514743_43	UniRef90_A0A6P2EJ50	390.0	0	Structural protein	N/A
eggNOG-mapper	UHGV-1514743_43	1157708.KB907450_gene5438	384.0	0	N/A	N/A
KOfam	UHGV-1514743_44	K03988	42.8	0.0000000000056	C1QG; complement C1q subcomponent subunit C	N/A
PHROG	UHGV-1514743_44	phrog_1640	44.3	0.0000000000026	tail protein	tail
Pfam	UHGV-1514743_44	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1514743_44	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_45	phrog_5073	58.0	5.1e-17	tail fiber protein	tail
eggNOG-mapper	UHGV-1514743_45	563192.HMPREF0179_03429	58.5	0.000000445	domain, Protein	N/A
Pfam	UHGV-1514743_45	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1514743_45	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1514743_46	phrog_4912	120.1	2.10055e-42	tail fiber assembly	tail
UniRef90	UHGV-1514743_46	UniRef90_UPI001F4F2EB0	228.0	0	phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1514743_46	762966.HMPREF9439_01057	207.0	0	Phage tail assembly chaperone protein	N/A
Pfam	UHGV-1514743_46	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-1514743_46	PF16778	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1514743_47	469610.HMPREF0189_02346	63.2	0.0000000000396	N/A	N/A
structural_annotation	UHGV-1514743_47	PF17065	N/A	N/A	N/A	N/A
PHROG	UHGV-1514743_48	phrog_199	68.4	7.7e-20	holin	lysis
UniRef90	UHGV-1514743_48	UniRef90_UPI0012BCAC2D	176.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1514743_48	762966.HMPREF9439_01063	169.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1514743_48	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1514743_48	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1514743_48	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1514743_48	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1514743_49	K01185	98.4	1e-28	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-1514743_49	phrog_7	115.1	7.1e-34	endolysin	lysis
UniRef90	UHGV-1514743_49	UniRef90_A0A5B3FP35	304.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1514743_49	469610.HMPREF0189_02350	192.0	0	Phage lysozyme	N/A
Pfam	UHGV-1514743_49	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-1514743_49	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
structural_annotation	UHGV-1514743_49	PF00959,MF_04110,COG3772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1514743_51	UniRef90_A0A2G6YDA5	77.8	9.01e-18	Anaerobic ribonucleoside-triphosphate reductase-like protein	N/A
eggNOG-mapper	UHGV-1514743_51	469610.HMPREF0189_02290	91.3	6.07e-24	Anaerobic ribonucleoside-triphosphate reductase	N/A
Pfam	UHGV-1514743_51	PF13597	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	NRDD
COG	UHGV-1514743_51	COG1328	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1514743	Yes	38,391	49	87	1
UHGV-0072432	No	38,391	49	87	1
UHGV-0186206	No	13,563	51	31	1