Viral OTU vOTU-030217

vOTU: vOTU-030217

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-030217
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-06784 → vOTU-030217
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter → Lawsonibacter asaccharolyticus
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1352414
Biosample ID	SAMN11893780
Length	22,940 bps
CheckV Completeness	65.08% (Medium-quality)
CDS Count	38
CDS Density	92.93%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1352414_1	K01358	100.7	2e-29	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1352414_1	phrog_94	142.3	4.99983e-42	head maturation protease	head and packaging
UniRef90	UHGV-1352414_1	UniRef90_A0A096CPA9	374.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1352414_1	742738.HMPREF9460_00875	374.0	0	Clp protease	N/A
Pfam	UHGV-1352414_1	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1352414_1	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1352414_1	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_2	phrog_12	258.2	0	portal protein	head and packaging
UniRef90	UHGV-1352414_2	UniRef90_A0A1Y4RNE3	657.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1352414_2	742738.HMPREF9460_00874	575.0	0	Phage portal protein	N/A
Pfam	UHGV-1352414_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1352414_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1352414_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1352414_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_4	phrog_9	300.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1352414_4	UniRef90_A0A6N3FX18	1130.0	0	Phage Terminase	N/A
eggNOG-mapper	UHGV-1352414_4	693746.OBV_20000	1098.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1352414_4	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1352414_4	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1352414_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1352414_4	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_5	phrog_83	66.5	4.8e-19	terminase small subunit	head and packaging
UniRef90	UHGV-1352414_5	UniRef90_A0A6N3FW38	280.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1352414_5	1234664.AMRO01000024_gene1803	54.7	0.000000549	Phage terminase, small subunit	N/A
Pfam	UHGV-1352414_5	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1352414_5	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1352414_5	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_6	phrog_144	91.8	7.2e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352414_6	UniRef90_UPI001031C755	222.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1352414_6	742738.HMPREF9460_00869	186.0	0	HNH endonuclease	N/A
Pfam	UHGV-1352414_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1352414_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1352414_6	PF01844,COG1403	N/A	N/A	N/A	N/A
UniRef90	UHGV-1352414_7	UniRef90_UPI001F309B22	120.0	1.34e-34	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-1352414_7	1226322.HMPREF1545_00110	58.9	0.00000000007	Cysteine-rich KTR	N/A
Pfam	UHGV-1352414_7	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-1352414_7	PF14205,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_8	phrog_3584	177.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1352414_8	742738.HMPREF9460_00867	221.0	0	N/A	N/A
structural_annotation	UHGV-1352414_8	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_11	phrog_38832	65.7	3.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1352414_11	665956.HMPREF1032_03087	98.2	1.97e-23	N/A	N/A
Pfam	UHGV-1352414_13	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1352414_14	phrog_25732	66.4	3.1e-19	N/A	unknown function
PHROG	UHGV-1352414_15	phrog_22389	45.3	0.00000000000099	N/A	unknown function
structural_annotation	UHGV-1352414_15	PF01402,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1352414_16	K03111	151.3	8.40779e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1352414_16	phrog_44	147.7	5.88545e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352414_16	UniRef90_UPI0012489F18	217.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1352414_16	1378168.N510_01674	166.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1352414_16	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1352414_16	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1352414_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1352414_16	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1352414_16	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_18	phrog_15609	264.2	0	N/A	unknown function
UniRef90	UHGV-1352414_18	UniRef90_UPI001958A9B5	396.0	0	N/A	N/A
eggNOG-mapper	UHGV-1352414_18	1226322.HMPREF1545_00098	239.0	0	N/A	N/A
Pfam	UHGV-1352414_18	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-1352414_18	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-1352414_18	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
KOfam	UHGV-1352414_19	K03496	198.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1352414_19	phrog_164	160.3	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352414_19	UniRef90_A0A1Y4CFT6	444.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1352414_19	742738.HMPREF9460_00854	240.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-1352414_19	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1352414_19	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1352414_19	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1352414_20	K02314	275.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1352414_20	phrog_19	247.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352414_20	UniRef90_A0A3A8Z521	545.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1352414_20	1226322.HMPREF1545_00095	286.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1352414_20	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1352414_20	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1352414_20	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1352414_20	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_21	phrog_428	58.9	1.1e-16	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352414_21	UniRef90_A0A8J6MF41	228.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1352414_21	1226322.HMPREF1545_00094	156.0	5.60519e-44	DnaD domain protein	N/A
Pfam	UHGV-1352414_21	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1352414_21	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1352414_21	PF20714,MF_01177,NF040582,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1352414_29	K07729	45.2	0.0000000000018	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-1352414_29	UniRef90_A0A845R093	91.3	2.31e-22	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1352414_29	1203606.HMPREF1526_00997	66.2	0.000000000000218	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1352414_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1352414_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1352414_29	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1352414_30	K22299	46.7	0.00000000000067	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1352414_30	phrog_8	65.8	9.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1352414_30	UniRef90_UPI00189B8222	106.0	1.68e-27	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1352414_30	1391647.AVSV01000039_gene1077	75.1	4.54e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1352414_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1352414_30	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1352414_30	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_31	phrog_87	81.7	6.7e-24	metallo-protease	other
UniRef90	UHGV-1352414_31	UniRef90_UPI00195AE3BC	228.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1352414_31	1007096.BAGW01000011_gene2354	153.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1352414_31	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1352414_31	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1352414_31	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_32	phrog_1847	428.0	0	N/A	unknown function
UniRef90	UHGV-1352414_32	UniRef90_A0A1C5XXD7	390.0	0	T5orf172 domain	N/A
eggNOG-mapper	UHGV-1352414_32	1121287.AUMU01000001_gene1311	364.0	0	T5orf172	N/A
Pfam	UHGV-1352414_32	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-1352414_32	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1352414_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1352414_32	PF02970,NF041454	N/A	N/A	N/A	N/A
KOfam	UHGV-1352414_33	K06400	307.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1352414_33	phrog_95	309.1	0	integrase	integration and excision
UniRef90	UHGV-1352414_33	UniRef90_UPI001F38D8FE	720.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1352414_33	1121344.JHZO01000003_gene691	631.0	0	resolvase	N/A
Pfam	UHGV-1352414_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1352414_33	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1352414_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1352414_33	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_34	phrog_21357	112.4	3.1e-33	endolysin	lysis
UniRef90	UHGV-1352414_34	UniRef90_UPI00067EF636	402.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1352414_34	1378168.N510_02471	188.0	0	NLP P60 protein	N/A
Pfam	UHGV-1352414_34	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1352414_34	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1352414_34	PF00877,TIGR02594,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1352414_35	phrog_18218	43.0	0.0000000000082	N/A	unknown function
structural_annotation	UHGV-1352414_35	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-1352414_36	UniRef90_A0A845RAD8	94.7	1.25e-22	LapA family protein	N/A
eggNOG-mapper	UHGV-1352414_36	1203606.HMPREF1526_00254	114.0	1.76e-31	N/A	N/A
PHROG	UHGV-1352414_37	phrog_1863	74.5	7.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1352414_37	552398.HMPREF0866_01158	123.0	4.32e-36	N/A	N/A
PHROG	UHGV-1352414_38	phrog_27545	173.2	0	N/A	unknown function
UniRef90	UHGV-1352414_38	UniRef90_D1PRE7	137.0	1.04e-38	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-1352414_38	1226322.HMPREF1545_00129	195.0	0	N/A	N/A
Pfam	UHGV-1352414_38	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1352414	Yes	22,940	60	65	1
UHGV-0195433	No	13,064	63	37	1