Viral OTU vOTU-032955

vOTU: vOTU-032955

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-032955
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-05332 → vOTU-032955
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Peptostreptococcaceae → Clostridioides → Clostridioides difficile
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0478061
Biosample ID	N/A
Length	29,488 bps
CheckV Completeness	73.22% (Medium-quality)
CDS Count	33
CDS Density	93.99%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.22)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0478061_2	phrog_509	274.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0478061_2	UniRef90_A0A8E3MVM6	260.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0478061_2	1235792.C808_05361	240.0	0	Putative ATPase subunit of terminase (gpP-like)	N/A
Pfam	UHGV-0478061_2	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-0478061_2	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0478061_2	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0478061_2	NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0478061_3	K06909	69.4	4e-20	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0478061_3	phrog_2	84.5	2.1e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0478061_3	UniRef90_A0A8E3MVD8	873.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0478061_3	411902.CLOBOL_00139	765.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0478061_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0478061_3	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_4	phrog_533	363.7	0	portal protein	head and packaging
UniRef90	UHGV-0478061_4	UniRef90_A0A8E3MVT4	764.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0478061_4	999413.HMPREF1094_00220	499.0	0	phage minor capsid protein	N/A
Pfam	UHGV-0478061_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0478061_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_5	phrog_581	266.6	0	minor head protein	head and packaging
UniRef90	UHGV-0478061_5	UniRef90_A0A8E3MVJ2	641.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0478061_5	411461.DORFOR_01164	478.0	0	N/A	N/A
Pfam	UHGV-0478061_5	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0478061_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0478061_5	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_6	phrog_194	81.8	1.1e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0478061_6	UniRef90_UPI001D080C73	246.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0478061_6	411902.CLOBOL_00135	156.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0478061_6	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0478061_6	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_7	phrog_10	178.2	0	major head protein	head and packaging
UniRef90	UHGV-0478061_7	UniRef90_A0A8E3MYF6	692.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0478061_7	999413.HMPREF1094_00215	551.0	0	Phage capsid family	N/A
Pfam	UHGV-0478061_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0478061_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0478061_7	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
PHROG	UHGV-0478061_9	phrog_541	83.2	2.7e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0478061_9	1304866.K413DRAFT_3039	65.5	0.00000000000766	N/A	N/A
PHROG	UHGV-0478061_10	phrog_3366	100.0	2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0478061_10	573061.Clocel_3539	69.7	0.00000000000032	N/A	N/A
Pfam	UHGV-0478061_10	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0478061_10	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_11	phrog_556	74.4	1.3e-21	minor head protein	head and packaging
UniRef90	UHGV-0478061_11	UniRef90_UPI001E609FF9	221.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0478061_11	411461.DORFOR_01170	207.0	0	Minor capsid protein	N/A
Pfam	UHGV-0478061_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0478061_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_12	phrog_3266	76.2	3.8e-22	tail completion	connector
eggNOG-mapper	UHGV-0478061_12	663278.Ethha_0098	57.4	0.0000000194	N/A	N/A
structural_annotation	UHGV-0478061_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_13	phrog_820	100.6	1.2e-29	major tail protein	tail
UniRef90	UHGV-0478061_13	UniRef90_A0A174M1L1	292.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0478061_13	411461.DORFOR_01172	261.0	0	N/A	N/A
structural_annotation	UHGV-0478061_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_14	phrog_4450	61.8	1.3e-17	N/A	unknown function
UniRef90	UHGV-0478061_14	UniRef90_A0A3R5XYJ4	82.0	8.91e-18	AP endonuclease	N/A
eggNOG-mapper	UHGV-0478061_14	573061.Clocel_0218	48.9	0.0000099	N/A	N/A
Pfam	UHGV-0478061_14	PF20378	N/A	N/A	N/A	DUF6673
PHROG	UHGV-0478061_15	phrog_706	155.9	0	N/A	unknown function
UniRef90	UHGV-0478061_15	UniRef90_UPI001E58B693	229.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0478061_15	411461.DORFOR_01174	208.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0478061_15	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0478061_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_16	phrog_13339	391.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0478061_16	UniRef90_A0A8E3MVE4	1112.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0478061_16	411461.DORFOR_01175	443.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0478061_16	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0478061_16	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0478061_16	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0478061_16	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_17	phrog_202	308.2	0	distal tail protein Dit	tail
UniRef90	UHGV-0478061_17	UniRef90_A0A396Q4P7	658.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0478061_17	1121864.OMO_02162	194.0	0	Phage tail protein	N/A
Pfam	UHGV-0478061_17	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0478061_17	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0478061_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0478061_17	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
KOfam	UHGV-0478061_18	K06236	167.4	0	COL1A; collagen type I alpha	N/A
PHROG	UHGV-0478061_18	phrog_588	204.7	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-0478061_18	UniRef90_UPI00054DB42D	826.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0478061_18	568703.LGG_01523	421.0	0	cellulase activity	N/A
Pfam	UHGV-0478061_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0478061_18	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
NCBIFam	UHGV-0478061_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0478061_18	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0478061_19	phrog_4105	83.0	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0478061_19	658655.HMPREF0988_02547	155.0	0	N/A	N/A
PHROG	UHGV-0478061_20	phrog_1129	90.1	1.2e-26	holin	lysis
UniRef90	UHGV-0478061_20	UniRef90_UPI00051B7422	166.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0478061_20	742733.HMPREF9469_05010	152.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0478061_20	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0478061_20	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-0478061_21	K07273	177.7	0	acm; lysozyme	N/A
PHROG	UHGV-0478061_21	phrog_291	185.2	0	endolysin	lysis
UniRef90	UHGV-0478061_21	UniRef90_A0A1M6TRJ6	276.0	0	Glycosyl hydrolases family 25	N/A
eggNOG-mapper	UHGV-0478061_21	1235798.C817_00299	225.0	0	family 25	N/A
Pfam	UHGV-0478061_21	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0478061_21	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-0478061_21	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0478061_21	PF01183,NF007404,COG3757,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-0478061_25	K14059	156.5	0	int; integrase	N/A
PHROG	UHGV-0478061_25	phrog_1	158.4	0	integrase	integration and excision
UniRef90	UHGV-0478061_25	UniRef90_UPI00148B006C	378.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0478061_25	1304866.K413DRAFT_3002	285.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0478061_25	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0478061_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0478061_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0478061_25	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_26	phrog_4980	153.1	1.4013e-45	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0478061_26	33035.JPJF01000109_gene437	85.9	4.43e-17	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0478061_26	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0478061_26	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0478061_26	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_27	phrog_87	85.6	4.5e-25	metallo-protease	other
UniRef90	UHGV-0478061_27	UniRef90_UPI001E2890E0	227.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0478061_27	1235798.C817_04756	196.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0478061_27	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0478061_27	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0478061_27	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0478061_28	phrog_2967	52.1	0.0000000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-0478061_28	UniRef90_A0A564SCK3	248.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0478061_28	411470.RUMGNA_03230	197.0	0	sequence-specific DNA binding	N/A
COG	UHGV-0478061_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0478061_28	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0478061_29	UniRef90_UPI001C00A264	125.0	1.97e-36	N/A	N/A
eggNOG-mapper	UHGV-0478061_29	411470.RUMGNA_03231	100.0	2.96e-27	N/A	N/A
Pfam	UHGV-0478061_29	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0478061_29	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0478061_29	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0478061_30	K07741	160.0	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0478061_30	phrog_63	141.8	5.09933e-42	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0478061_30	UniRef90_UPI001E3AA710	475.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0478061_30	935837.JAEK01000027_gene1661	297.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0478061_30	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0478061_30	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0478061_30	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0478061_30	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
Pfam	UHGV-0478061_31	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0478061_31	PF13744,MF_00535,NF010465,COG3655	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0478061	Yes	29,488	46	73	1
UHGV-0466843	No	10,415	50	27	1