Viral OTU vOTU-036003

vOTU: vOTU-036003

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-036003
Number of Genomes	4
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00463 → vGENUS-02090 → vOTU-036003
Host Lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0049580
Biosample ID	SAMEA2042742
Length	29,928 bps
CheckV Completeness	70.48% (Medium-quality)
CDS Count	47
CDS Density	90.94%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0049580_1	UniRef90_A0A844U3V8	75.1	0.00000000000109	Leucine-rich repeat protein	N/A
eggNOG-mapper	UHGV-0049580_1	1250232.JQNJ01000001_gene2876	66.6	0.00000000105	Leucine rich repeats (6 copies)	N/A
COG	UHGV-0049580_1	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
KOfam	UHGV-0049580_2	K01160	57.8	3.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0049580_2	phrog_140	114.6	7.5e-34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0049580_2	UniRef90_R6ZAS0	104.0	9.55e-26	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0049580_2	545697.HMPREF0216_02819	92.4	1.02e-21	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0049580_2	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0049580_2	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0049580_2	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
Pfam	UHGV-0049580_3	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-0049580_5	PF09871,TIGR00739	N/A	N/A	N/A	N/A
Pfam	UHGV-0049580_8	PF09643	N/A	N/A	YopX protein	YopX
PHROG	UHGV-0049580_15	phrog_36	56.3	7.4e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0049580_15	994573.T472_0211085	56.2	0.0000000396	sigma factor activity	N/A
COG	UHGV-0049580_15	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0049580_15	PF04545,MF_00962,TIGR02984,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_18	phrog_1233	51.9	0.000000000000012	N/A	unknown function
UniRef90	UHGV-0049580_18	UniRef90_R7IWF8	170.0	0	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-0049580_18	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0049580_18	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-0049580_20	K06909	326.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0049580_20	phrog_5653	129.5	2.7e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0049580_20	UniRef90_R6XV26	1023.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-0049580_20	411461.DORFOR_01162	430.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0049580_20	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
Pfam	UHGV-0049580_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0049580_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0049580_20	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_21	phrog_533	329.3	0	portal protein	head and packaging
UniRef90	UHGV-0049580_21	UniRef90_R6Y8H1	896.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0049580_21	545697.HMPREF0216_02845	397.0	0	N/A	N/A
structural_annotation	UHGV-0049580_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_22	phrog_581	211.3	0	minor head protein	head and packaging
UniRef90	UHGV-0049580_22	UniRef90_R6YG84	989.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0049580_22	1462526.BN990_03872	131.0	6.01e-31	Phage minor capsid protein 2	N/A
Pfam	UHGV-0049580_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0049580_22	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0049580_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0049580_22	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_23	phrog_194	99.8	3.4e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0049580_23	UniRef90_R6XV28	342.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0049580_23	862517.HMPREF9225_1649	82.8	2.43e-17	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0049580_23	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0049580_23	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_24	phrog_283	242.7	0	major head protein	head and packaging
UniRef90	UHGV-0049580_24	UniRef90_A0A173REC9	470.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-0049580_24	411461.DORFOR_01167	438.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0049580_24	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0049580_24	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_25	phrog_541	88.1	8.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0049580_25	1120998.AUFC01000030_gene2237	66.6	0.00000000000212	N/A	N/A
PHROG	UHGV-0049580_26	phrog_3366	69.3	6.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0049580_26	632245.CLP_1651	52.4	0.00000104	N/A	N/A
Pfam	UHGV-0049580_26	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0049580_26	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_27	phrog_556	64.7	1.1e-18	minor head protein	head and packaging
UniRef90	UHGV-0049580_27	UniRef90_A0A174E6U4	95.9	1.69e-22	Minor capsid	N/A
eggNOG-mapper	UHGV-0049580_27	1304866.K413DRAFT_3041	94.7	7.58e-23	N/A	N/A
Pfam	UHGV-0049580_27	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0049580_27	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_28	phrog_3266	113.6	1.1e-33	tail completion	connector
UniRef90	UHGV-0049580_28	UniRef90_UPI001CF15A1F	94.7	4.11e-22	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0049580_28	411473.RUMCAL_01934	87.4	4.69e-20	N/A	N/A
structural_annotation	UHGV-0049580_28	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_29	phrog_3099	102.7	3.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0049580_29	469596.HMPREF9488_01325	102.0	1.26e-24	N/A	N/A
structural_annotation	UHGV-0049580_29	PF09393,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_30	phrog_6148	61.5	1.3e-17	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0049580_30	UniRef90_A0A7X8EVR3	62.0	0.0000000065	N/A	N/A
eggNOG-mapper	UHGV-0049580_30	1449050.JNLE01000005_gene4075	64.7	0.0000000000364	N/A	N/A
Pfam	UHGV-0049580_30	PF12978	N/A	N/A	N/A	DUF3862
structural_annotation	UHGV-0049580_30	PF12978	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0049580_31	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_32	phrog_706	90.2	2.3e-26	N/A	unknown function
UniRef90	UHGV-0049580_32	UniRef90_UPI00067E77F7	101.0	1.52e-23	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0049580_32	469596.HMPREF9488_01327	95.9	3.08e-22	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0049580_32	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0049580_32	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_33	phrog_58	87.7	1.2e-25	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0049580_33	1123304.AQYA01000037_gene233	65.9	0.0000000522	phage tail tape measure protein	N/A
COG	UHGV-0049580_33	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0049580_33	PF09486,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_34	phrog_1194	44.4	0.0000000000026	N/A	unknown function
structural_annotation	UHGV-0049580_34	PF20458,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_35	phrog_5668	140.9	0	tail fiber protein	tail
UniRef90	UHGV-0049580_35	UniRef90_R7ITT1	588.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0049580_35	469596.HMPREF9488_01330	171.0	4.90006e-41	N/A	N/A
Pfam	UHGV-0049580_35	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0049580_35	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0049580_36	PF09343	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_37	phrog_5717	79.4	3.4e-23	tail protein	tail
UniRef90	UHGV-0049580_37	UniRef90_A0A4U8Q6R4	103.0	4.13e-24	Baseplate wedge subunit and tail pin	N/A
eggNOG-mapper	UHGV-0049580_37	556261.HMPREF0240_01282	132.0	1.67e-33	N/A	N/A
COG	UHGV-0049580_37	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0049580_37	COG4675	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0049580_39	PF17790,NF011770	N/A	N/A	N/A	N/A
KOfam	UHGV-0049580_40	K10268	42.5	0.000000000006	FBXL2_20; F-box and leucine-rich repeat protein 2/20	N/A
PHROG	UHGV-0049580_40	phrog_22899	77.4	6.1e-23	N/A	unknown function
Pfam	UHGV-0049580_40	PF03382	N/A	N/A	N/A	DUF285
NCBIFam	UHGV-0049580_40	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
structural_annotation	UHGV-0049580_40	PF13306	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_41	phrog_13256	51.7	0.0000000000000079	N/A	unknown function
eggNOG-mapper	UHGV-0049580_41	1160721.RBI_II00522	55.1	0.00000000202	N/A	N/A
KOfam	UHGV-0049580_42	K01447	82.9	5.2e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0049580_42	phrog_1493	177.9	0	endolysin	lysis
UniRef90	UHGV-0049580_42	UniRef90_A0A352MWM3	285.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0049580_42	1280698.AUJS01000007_gene1059	228.0	0	Ami_2	N/A
Pfam	UHGV-0049580_42	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0049580_42	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0049580_42	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0049580_42	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0049580_43	phrog_9659	62.5	3.4e-19	N/A	unknown function
UniRef90	UHGV-0049580_43	UniRef90_UPI000A26FDC2	85.9	1.81e-16	N/A	N/A
Pfam	UHGV-0049580_43	PF15956	N/A	N/A	N/A	DUF4760
KOfam	UHGV-0049580_45	K22299	60.1	5.3e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0049580_45	phrog_8	52.5	0.000000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0049580_45	UniRef90_R5YVI1	126.0	1.57e-35	HTH-type transcriptional regulator SinR	N/A
eggNOG-mapper	UHGV-0049580_45	86416.Clopa_3404	66.2	0.00000000000194	helix-turn-helix	N/A
PADLOC	UHGV-0049580_45	retron_type_VI_hth_cluster2_1	55.8	0.0000000000000014	N/A	Retron
Pfam	UHGV-0049580_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0049580_45	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
COG	UHGV-0049580_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0049580_45	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0049580	Yes	29,928	30	70	1
UHGV-1535238	No	29,928	30	70	1
UHGV-1398086	No	29,445	30	69	1
UHGV-1498126	No	25,718	31	65	1