Viral OTU vOTU-036775

vOTU: vOTU-036775

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-036775
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01292 → vOTU-036775
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0097729
Biosample ID	SAMEA3541505
Length	28,642 bps
CheckV Completeness	71.01% (Medium-quality)
CDS Count	57
CDS Density	90.66%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.01)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0097729_1	phrog_23464	307.8	0	N/A	unknown function
UniRef90	UHGV-0097729_1	UniRef90_A0A318XNK8	180.0	5.60519e-45	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0097729_1	1211814.CAPG01000074_gene3445	180.0	1.4013e-45	Phage tail tape measure protein TP901	N/A
COG	UHGV-0097729_1	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0097729_1	PF20155,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_2	phrog_709	96.3	2.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0097729_2	1384066.JAGT01000001_gene931	127.0	2.54e-36	N/A	N/A
structural_annotation	UHGV-0097729_2	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_3	phrog_88	183.0	0	major tail protein	tail
UniRef90	UHGV-0097729_3	UniRef90_A0A1Y3R915	245.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0097729_3	1226322.HMPREF1545_00121	218.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0097729_3	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0097729_3	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_4	phrog_78	40.9	0.000000000039	tail terminator	connector
eggNOG-mapper	UHGV-0097729_4	641112.ACOK01000108_gene1803	99.0	1.26e-25	N/A	N/A
structural_annotation	UHGV-0097729_4	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_5	phrog_5	55.6	0.0000000000000015	tail completion or Neck1 protein	connector
UniRef90	UHGV-0097729_5	UniRef90_UPI000F5C033A	101.0	2.44e-25	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0097729_5	411471.SUBVAR_05855	99.8	2.85e-25	N/A	N/A
Pfam	UHGV-0097729_5	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0097729_5	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_6	phrog_19734	79.9	3.5e-23	N/A	unknown function
UniRef90	UHGV-0097729_6	UniRef90_A0A8G1TQJ2	76.3	9.91e-16	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0097729_6	33035.JPJF01000039_gene275	76.3	1.66e-16	N/A	N/A
structural_annotation	UHGV-0097729_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097729_7	1232446.BAIE02000002_gene827	54.7	0.000000019	N/A	N/A
PHROG	UHGV-0097729_8	phrog_10	190.8	0	major head protein	head and packaging
UniRef90	UHGV-0097729_8	UniRef90_UPI001E346EE7	484.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0097729_8	396034.A6XMJ6_9CAUD	428.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0097729_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0097729_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0097729_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0097729_9	K06904	157.9	0	N/A	N/A
PHROG	UHGV-0097729_9	phrog_80	187.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0097729_9	UniRef90_A0A316NLC8	274.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0097729_9	398512.JQKC01000009_gene450	248.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0097729_9	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0097729_9	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0097729_9	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0097729_9	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_10	phrog_12	178.7	0	portal protein	head and packaging
UniRef90	UHGV-0097729_10	UniRef90_A0A1F2PE41	498.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0097729_10	1121423.JONT01000042_gene1421	495.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0097729_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0097729_10	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0097729_10	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0097729_10	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_11	phrog_9	289.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0097729_11	UniRef90_A0A316NLJ1	991.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0097729_11	1226322.HMPREF1545_00113	895.0	0	Phage Terminase	N/A
Pfam	UHGV-0097729_11	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0097729_11	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0097729_11	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0097729_11	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_12	phrog_361	71.1	2e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0097729_12	UniRef90_A0A1C6H6I9	160.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0097729_12	1145276.T479_19995	55.5	0.0000000396	Phage terminase, small subunit	N/A
Pfam	UHGV-0097729_12	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0097729_12	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0097729_12	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0097729_15	K07729	42.8	0.000000000011	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0097729_15	UniRef90_A0A5N7MBM8	51.2	0.000000718	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0097729_15	420324.KI912039_gene1994	48.5	0.00000138	transcriptional regulator	N/A
Pfam	UHGV-0097729_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0097729_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0097729_15	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_16	phrog_8	51.5	0.000000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0097729_16	UniRef90_U2SK55	150.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0097729_16	1226322.HMPREF1545_00039	150.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-0097729_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0097729_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0097729_16	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_18	phrog_25385	77.9	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0097729_18	411468.CLOSCI_00565	76.6	1.3e-16	N/A	N/A
PHROG	UHGV-0097729_19	phrog_1689	69.7	7.6e-20	nucleotide kinase	other
UniRef90	UHGV-0097729_19	UniRef90_UPI0013022309	106.0	2.41e-28	N/A	N/A
eggNOG-mapper	UHGV-0097729_19	1125712.HMPREF1316_2379	70.5	0.00000000000000758	N/A	N/A
Pfam	UHGV-0097729_19	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0097729_23	phrog_22543	53.2	0.0000000000000059	N/A	unknown function
PHROG	UHGV-0097729_25	phrog_38832	50.3	0.00000000000004	N/A	unknown function
PHROG	UHGV-0097729_27	phrog_25732	47.8	0.000000000000062	N/A	unknown function
structural_annotation	UHGV-0097729_27	NF011227	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097729_28	UniRef90_UPI001C3A10B1	67.0	0.00000000000128	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0097729_28	1226322.HMPREF1545_00023	50.4	0.000000767	N/A	N/A
PHROG	UHGV-0097729_29	phrog_3292	59.8	5.2e-17	N/A	unknown function
UniRef90	UHGV-0097729_29	UniRef90_A0A1V0QCT8	134.0	8.09e-40	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0097729_29	926692.AZYG01000059_gene89	79.7	4.79e-19	KTSC domain	N/A
Pfam	UHGV-0097729_29	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0097729_29	COG0433	N/A	N/A	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	N/A
structural_annotation	UHGV-0097729_29	PF13619	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_30	phrog_5765	54.5	0.0000000000000011	N/A	unknown function
UniRef90	UHGV-0097729_30	UniRef90_UPI00115D67B4	106.0	2.36e-28	BC1881 family protein	N/A
eggNOG-mapper	UHGV-0097729_30	1095750.HMPREF9970_1008	67.8	0.0000000000000303	N/A	N/A
NCBIFam	UHGV-0097729_30	NF033495.1	N/A	N/A	BC1881 family protein	N/A
UniRef90	UHGV-0097729_31	UniRef90_UPI0018AC26C5	85.1	9.14e-20	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0097729_31	742738.HMPREF9460_04054	70.1	0.0000000000000152	Restriction alleviation protein Lar	N/A
structural_annotation	UHGV-0097729_31	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_32	phrog_757	253.9	0	DNA methyltransferase	other
UniRef90	UHGV-0097729_32	UniRef90_UPI00189D46F4	329.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0097729_32	485918.Cpin_3834	285.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0097729_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0097729_32	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097729_33	PF20987	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_34	phrog_4632	54.6	1.4e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097729_34	UniRef90_A0A7X8IB41	110.0	5.48e-29	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0097729_34	469604.HMPREF0946_00819	54.7	0.0000000838	N/A	N/A
structural_annotation	UHGV-0097729_34	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_35	phrog_9804	143.7	1.10002e-42	N/A	unknown function
UniRef90	UHGV-0097729_35	UniRef90_UPI0018976F94	156.0	2.8026e-45	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0097729_35	1121344.JHZO01000003_gene981	166.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0097729_35	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0097729_35	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_36	phrog_16304	60.4	3.7e-17	N/A	unknown function
UniRef90	UHGV-0097729_36	UniRef90_UPI001E560709	96.3	5.65e-21	N/A	N/A
eggNOG-mapper	UHGV-0097729_36	1035196.HMPREF9998_01752	55.5	0.00000222	N/A	N/A
Pfam	UHGV-0097729_36	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0097729_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0097729_36	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0097729_37	K03111	143.4	2.59941e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0097729_37	phrog_44	143.1	1.80067e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097729_37	UniRef90_A0A8J7VJS5	220.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0097729_37	552398.HMPREF0866_02510	206.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0097729_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0097729_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0097729_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0097729_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0097729_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_38	phrog_4973	59.0	8.7e-17	N/A	unknown function
UniRef90	UHGV-0097729_38	UniRef90_UPI001D0904CC	81.3	1.15e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0097729_38	1072685.IX83_07155	52.0	0.0000000504	Helix-turn-helix domain	N/A
Pfam	UHGV-0097729_38	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0097729_38	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_39	phrog_7370	47.7	0.00000000000026	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097729_39	UniRef90_A0A2Z4QA94	164.0	0	Recombination protein	N/A
eggNOG-mapper	UHGV-0097729_39	445972.ANACOL_01826	76.6	8.87e-17	HNH nucleases	N/A
Pfam	UHGV-0097729_39	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0097729_40	phrog_72	69.9	3.7e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097729_40	UniRef90_UPI001F3F3E5C	204.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0097729_40	445972.ANACOL_01825	141.0	3.4e-40	N/A	N/A
structural_annotation	UHGV-0097729_40	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_41	phrog_155	135.8	3.7e-40	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097729_41	UniRef90_UPI001C126E67	246.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0097729_41	97138.C820_00777	168.0	0	ERF superfamily	N/A
Pfam	UHGV-0097729_41	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0097729_41	PF04404,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097729_47	UniRef90_UPI000F0633F9	91.3	1.74e-22	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0097729_47	693746.OBV_43260	88.2	4.95e-22	N/A	N/A
KOfam	UHGV-0097729_51	K22300	53.0	0.0000000000000082	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0097729_51	phrog_8	40.3	0.000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-0097729_51	UniRef90_G9YR83	246.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0097729_51	411471.SUBVAR_05818	140.0	2.4e-41	sequence-specific DNA binding	N/A
Pfam	UHGV-0097729_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0097729_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0097729_51	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0097729_53	phrog_2700	64.7	2.4e-18	N/A	unknown function
UniRef90	UHGV-0097729_53	UniRef90_UPI001A9BA4DF	152.0	1.64933e-42	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0097729_53	457396.CSBG_00774	124.0	3.19e-34	Bacterial PH domain	N/A
Pfam	UHGV-0097729_53	PF14470	N/A	N/A	Bacterial PH domain	bPH_3
Pfam	UHGV-0097729_53	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0097729_53	PF14470,NF033891,COG3402	N/A	N/A	N/A	N/A
KOfam	UHGV-0097729_55	K14623	335.3	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-0097729_55	phrog_8036	280.9	0	N/A	unknown function
UniRef90	UHGV-0097729_55	UniRef90_UPI001CBCBA31	378.0	0	DNA damage-inducible protein D	N/A
eggNOG-mapper	UHGV-0097729_55	537007.BLAHAN_04376	351.0	0	N/A	N/A
AcrCatalog	UHGV-0097729_55	cluster_17589	120.0	4.85e-34	NA	N/A
PADLOC	UHGV-0097729_55	Specificity_I_00032	159.6	0	Type I specificity subunit	RM
Pfam	UHGV-0097729_55	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-0097729_55	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-0097729_55	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0097729_55	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0097729_56	K14059	97.5	2.5e-28	int; integrase	N/A
PHROG	UHGV-0097729_56	phrog_1	132.9	3.4e-39	integrase	integration and excision
UniRef90	UHGV-0097729_56	UniRef90_UPI000F051A1D	551.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0097729_56	693746.OBV_43340	448.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0097729_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0097729_56	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0097729_56	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0097729_57	K07636	265.1	0	phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]	N/A
PHROG	UHGV-0097729_57	phrog_857	217.9	0	N/A	unknown function
UniRef90	UHGV-0097729_57	UniRef90_A0A8J7VKI9	657.0	0	HAMP domain-containing histidine kinase	N/A
eggNOG-mapper	UHGV-0097729_57	478749.BRYFOR_08930	259.0	0	Histidine kinase	N/A
Pfam	UHGV-0097729_57	PF00512	N/A	N/A	His Kinase A (phospho-acceptor) domain	HisKA
Pfam	UHGV-0097729_57	PF02518	N/A	N/A	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	HATPase_c
COG	UHGV-0097729_57	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0097729	Yes	28,642	50	71	1
UHGV-1555858	No	11,397	50	29	1