Viral OTU vOTU-038051

vOTU: vOTU-038051

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-038051
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vOTU-038051
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0142553
Biosample ID	N/A
Length	28,108 bps
CheckV Completeness	80.68% (Medium-quality)
CDS Count	43
CDS Density	93.07%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0142553_1	UniRef90_A0A4R1QMH6	86.7	8.68e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0142553_1	445972.ANACOL_00210	102.0	5.62e-28	N/A	N/A
structural_annotation	UHGV-0142553_1	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_3	phrog_4068	79.8	4e-23	N/A	unknown function
structural_annotation	UHGV-0142553_3	PF06657	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_5	phrog_199	62.1	7.2e-18	holin	lysis
UniRef90	UHGV-0142553_5	UniRef90_R5AT18	273.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0142553_5	742738.HMPREF9460_01388	144.0	4.77002e-42	Bacteriophage holin family	N/A
Pfam	UHGV-0142553_5	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0142553_5	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0142553_5	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0142553_5	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0142553_6	K01447	82.5	7.2e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0142553_6	phrog_5182	153.0	2.8026e-45	endolysin	lysis
UniRef90	UHGV-0142553_6	UniRef90_R5AZE6	259.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-0142553_6	397288.C806_00777	199.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0142553_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0142553_6	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-0142553_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0142553_6	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142553_7	PF00629,NF033675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0142553_8	411473.RUMCAL_00420	72.4	0.000000000337	nuclear chromosome segregation	N/A
Pfam	UHGV-0142553_8	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
COG	UHGV-0142553_8	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0142553_9	phrog_6616	60.1	6.5e-18	tail protein	tail
structural_annotation	UHGV-0142553_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_11	phrog_1535	124.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0142553_11	UniRef90_A0A810PX76	116.0	2.28e-23	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0142553_11	1449050.JNLE01000003_gene3881	140.0	1.16e-31	domain protein	N/A
COG	UHGV-0142553_11	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142553_11	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_12	phrog_706	107.7	1.1e-31	N/A	unknown function
UniRef90	UHGV-0142553_12	UniRef90_UPI00164D7633	174.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0142553_12	693746.OBV_18170	169.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0142553_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0142553_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_13	phrog_11299	99.9	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0142553_13	1449050.JNLE01000003_gene3883	66.2	0.0000000000104	N/A	N/A
structural_annotation	UHGV-0142553_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_14	phrog_3099	88.9	6.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0142553_14	693746.OBV_18150	223.0	0	N/A	N/A
structural_annotation	UHGV-0142553_14	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_15	phrog_3266	64.1	2e-18	tail completion	connector
eggNOG-mapper	UHGV-0142553_15	476272.RUMHYD_01781	120.0	2.72e-32	N/A	N/A
structural_annotation	UHGV-0142553_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_16	phrog_556	63.4	7.7e-19	minor head protein	head and packaging
UniRef90	UHGV-0142553_16	UniRef90_A0A1H7MNM8	115.0	4.6e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0142553_16	476272.RUMHYD_01780	114.0	1.7e-30	N/A	N/A
Pfam	UHGV-0142553_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0142553_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_17	phrog_3366	50.6	0.000000000000037	N/A	unknown function
structural_annotation	UHGV-0142553_17	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_18	phrog_541	65.7	7.2e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0142553_18	476272.RUMHYD_01778	75.5	0.00000000000000398	N/A	N/A
PHROG	UHGV-0142553_19	phrog_267	53.7	0.000000000000003	major head protein	head and packaging
eggNOG-mapper	UHGV-0142553_19	1235799.C818_04223	159.0	4.2039e-44	N/A	N/A
structural_annotation	UHGV-0142553_19	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_20	phrog_194	41.0	0.000000000034	head scaffolding protein	head and packaging
UniRef90	UHGV-0142553_20	UniRef90_UPI001C0EBA51	126.0	6.74e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0142553_20	1539298.JO41_08210	60.5	0.00000000901	Phage minor structural protein GP20	N/A
Pfam	UHGV-0142553_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0142553_20	PF06810	N/A	N/A	N/A	N/A
UniRef90	UHGV-0142553_21	UniRef90_UPI000C08D045	48.1	0.00000579	N/A	N/A
PHROG	UHGV-0142553_22	phrog_581	245.3	0	minor head protein	head and packaging
UniRef90	UHGV-0142553_22	UniRef90_A0A3D4T830	348.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0142553_22	476272.RUMHYD_01761	225.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0142553_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0142553_22	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0142553_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142553_22	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_23	phrog_533	210.8	0	portal protein	head and packaging
UniRef90	UHGV-0142553_23	UniRef90_A0A173TY48	345.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0142553_23	33035.JPJF01000106_gene3135	325.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0142553_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_24	phrog_1233	95.2	7.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0142553_24	1415774.U728_832	93.2	3.72e-23	N/A	N/A
structural_annotation	UHGV-0142553_24	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-0142553_25	K06909	395.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0142553_25	phrog_5653	146.1	2.00386e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0142553_25	UniRef90_A0A416S378	638.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0142553_25	33035.JPJF01000106_gene3136	600.0	0	Terminase small subunit	N/A
Pfam	UHGV-0142553_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0142553_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0142553_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0142553_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0142553_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0142553_25	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142553_26	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_27	phrog_36	59.8	6.1e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0142553_27	428125.CLOLEP_01806	101.0	2.04e-25	N/A	N/A
Pfam	UHGV-0142553_27	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0142553_27	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_28	phrog_3136	117.2	3.7e-35	N/A	unknown function
UniRef90	UHGV-0142553_28	UniRef90_UPI001C26B029	125.0	1.99e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0142553_28	97139.C824_00742	58.5	0.0000000238	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0142553_28	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0142553_28	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_29	phrog_5781	66.1	5.2e-19	N/A	unknown function
UniRef90	UHGV-0142553_29	UniRef90_A0A1C6JA96	101.0	7.04e-25	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0142553_29	1048834.TC41_1868	58.5	0.00000000612	N/A	N/A
Pfam	UHGV-0142553_29	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0142553_29	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_30	phrog_1029	227.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0142553_30	1203606.HMPREF1526_01890	375.0	0	N/A	N/A
structural_annotation	UHGV-0142553_30	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_31	phrog_997	120.3	1.2e-35	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142553_31	UniRef90_R6MCS9	110.0	7.71e-29	N/A	N/A
eggNOG-mapper	UHGV-0142553_31	1519439.JPJG01000059_gene1910	177.0	0	N/A	N/A
KOfam	UHGV-0142553_32	K06223	224.2	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0142553_32	phrog_56	175.6	0	DNA methyltransferase	other
UniRef90	UHGV-0142553_32	UniRef90_R9MCP5	305.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0142553_32	1235799.C818_02654	305.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0142553_32	MTase_II_00030	270.8	0	Type II methyltransferase	RM
Pfam	UHGV-0142553_32	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0142553_32	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0142553_32	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0142553_33	1232449.BAHV02000016_gene1829	137.0	1.2e-39	N/A	N/A
KOfam	UHGV-0142553_34	K03700	87.9	1.5e-25	recU; recombination protein U	N/A
PHROG	UHGV-0142553_34	phrog_843	136.3	1.10001e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0142553_34	UniRef90_A0A1H0W5Y9	163.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0142553_34	1203606.HMPREF1526_01884	149.0	2.02067e-42	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0142553_34	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0142553_34	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0142553_34	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_35	phrog_3584	131.4	7.4e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0142553_35	411470.RUMGNA_02047	137.0	4.08e-36	N/A	N/A
structural_annotation	UHGV-0142553_35	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0142553_38	K06284	113.6	1.2e-33	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0142553_38	phrog_4681	99.9	9.9e-30	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0142553_38	UniRef90_UPI0018F33479	105.0	4.97e-28	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0142553_38	268407.PWYN_12320	104.0	3.11e-28	AbrB family transcriptional regulator	N/A
Pfam	UHGV-0142553_38	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0142553_38	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0142553_38	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0142553_38	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0142553_39	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0142553_40	phrog_585	42.7	0.000000000011	N/A	unknown function
Pfam	UHGV-0142553_40	PF10711	N/A	N/A	N/A	DUF2513
PHROG	UHGV-0142553_41	phrog_750	43.1	0.0000000000045	N/A	unknown function
structural_annotation	UHGV-0142553_41	PF13835,NF040858	N/A	N/A	N/A	N/A
UniRef90	UHGV-0142553_43	UniRef90_UPI0013ECC13D	64.3	0.00000000000376	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0142553_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0142553_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0142553_43	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0142553	Yes	28,108	57	81	1
UHGV-1621977	No	11,594	57	33	1