Viral OTU vOTU-039002

vOTU: vOTU-039002

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-039002
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-06414 → vOTU-039002
Host Lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas_E → Pseudomonas_E paracarnis
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1676729
Biosample ID	SAMEA2737996
Length	20,781 bps
CheckV Completeness	50.55% (Medium-quality)
CDS Count	26
CDS Density	97.46%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1676729_1	K06223	88.8	8.5e-26	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1676729_1	phrog_1996	113.4	1.6e-33	DNA methyltransferase	other
UniRef90	UHGV-1676729_1	UniRef90_A0A3A9BHC1	133.0	1.38e-37	DNA adenine methylase (Fragment)	N/A
eggNOG-mapper	UHGV-1676729_1	1235799.C818_02654	135.0	7.71e-38	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1676729_1	MTase_II_00030	124.5	1.4e-36	Type II methyltransferase	RM
Pfam	UHGV-1676729_1	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1676729_1	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1676729_1	NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_2	phrog_19490	49.4	0.000000000000087	N/A	unknown function
eggNOG-mapper	UHGV-1676729_2	411459.RUMOBE_01110	56.2	0.00000000491	N/A	N/A
PHROG	UHGV-1676729_3	phrog_3032	59.1	1e-16	N/A	unknown function
KOfam	UHGV-1676729_4	K00390	103.2	5.6e-31	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1676729_4	phrog_424	113.1	2.2e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1676729_4	UniRef90_A0A133ZYT4	403.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1676729_4	1095750.HMPREF9970_1672	355.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1676729_4	BrxP_00001	55.3	2.3e-27	BrxP	BREX
Pfam	UHGV-1676729_4	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1676729_4	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1676729_4	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1676729_6	K00571	120.4	2.2e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1676729_6	phrog_67	100.1	1.5e-30	DNA methyltransferase	other
UniRef90	UHGV-1676729_6	UniRef90_A0A2T0B1I6	444.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1676729_6	749222.Nitsa_1817	384.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1676729_6	MTase_II_00157	102.8	2.2e-31	Type II methyltransferase	RM
Pfam	UHGV-1676729_6	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1676729_6	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1676729_6	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_7	phrog_36	79.6	4.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1676729_7	UniRef90_A0A4S3PY90	101.0	6.51e-25	N/A	N/A
eggNOG-mapper	UHGV-1676729_7	887325.HMPREF0381_0089	115.0	4.85e-31	sigma factor activity	N/A
Pfam	UHGV-1676729_7	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1676729_7	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1676729_7	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1676729_8	K06909	436.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1676729_8	phrog_3717	149.3	1.54143e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1676729_8	UniRef90_A0A496N2U6	859.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1676729_8	411461.DORFOR_01162	710.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1676729_8	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1676729_8	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1676729_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1676729_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1676729_8	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_9	phrog_533	350.9	0	portal protein	head and packaging
UniRef90	UHGV-1676729_9	UniRef90_A0A496N1N2	833.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1676729_9	411461.DORFOR_01163	510.0	0	N/A	N/A
structural_annotation	UHGV-1676729_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_10	phrog_581	300.8	0	minor head protein	head and packaging
UniRef90	UHGV-1676729_10	UniRef90_UPI001593C099	465.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1676729_10	411902.CLOBOL_00137	456.0	0	N/A	N/A
Pfam	UHGV-1676729_10	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1676729_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1676729_10	PF06152,PF04002	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_12	phrog_194	124.0	1.4e-36	head scaffolding protein	head and packaging
UniRef90	UHGV-1676729_12	UniRef90_C0DA41	164.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1676729_12	658655.HMPREF0988_02561	101.0	2.04e-24	Phage minor structural protein GP20	N/A
Pfam	UHGV-1676729_12	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1676729_12	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_13	phrog_422	227.8	0	major head protein	head and packaging
UniRef90	UHGV-1676729_13	UniRef90_W0U896	302.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1676729_13	1235794.C811_01371	308.0	0	N/A	N/A
structural_annotation	UHGV-1676729_13	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_15	phrog_541	100.5	1.1e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1676729_15	411902.CLOBOL_00133	147.0	2.24208e-44	N/A	N/A
PHROG	UHGV-1676729_16	phrog_3366	69.4	2.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-1676729_16	411902.CLOBOL_00132	144.0	9.2766e-43	N/A	N/A
Pfam	UHGV-1676729_16	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1676729_16	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_17	phrog_556	95.7	2.9e-28	minor head protein	head and packaging
UniRef90	UHGV-1676729_17	UniRef90_UPI00189CE0C6	172.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1676729_17	411902.CLOBOL_00131	160.0	0	Minor capsid protein	N/A
Pfam	UHGV-1676729_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1676729_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_18	phrog_3266	109.1	3e-32	tail completion	connector
eggNOG-mapper	UHGV-1676729_18	411902.CLOBOL_00130	191.0	0	N/A	N/A
structural_annotation	UHGV-1676729_18	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_19	phrog_3099	168.4	0	N/A	unknown function
UniRef90	UHGV-1676729_19	UniRef90_A0A7M3SAI1	192.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1676729_19	411902.CLOBOL_00129	253.0	0	N/A	N/A
structural_annotation	UHGV-1676729_19	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_20	phrog_11299	89.6	3.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-1676729_20	411902.CLOBOL_00128	196.0	0	N/A	N/A
PHROG	UHGV-1676729_21	phrog_706	129.6	2.2e-38	N/A	unknown function
UniRef90	UHGV-1676729_21	UniRef90_A0A0F0CE18	233.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1676729_21	1304866.K413DRAFT_3045	231.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1676729_21	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1676729_21	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_22	phrog_1535	197.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1676729_22	UniRef90_A0A173WM72	155.0	8.5e-35	Phage-related protein	N/A
eggNOG-mapper	UHGV-1676729_22	411902.CLOBOL_00126	818.0	0	N/A	N/A
COG	UHGV-1676729_22	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1676729_23	phrog_1194	52.1	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1676729_23	411902.CLOBOL_00125	168.0	0	N/A	N/A
structural_annotation	UHGV-1676729_23	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_24	phrog_13879	193.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1676729_24	411902.CLOBOL_00124	820.0	0	N/A	N/A
structural_annotation	UHGV-1676729_24	PF14594,PF21114,MF_00813,NF033848,TIGR02961,COG4379,COG4266	N/A	N/A	N/A	N/A
PHROG	UHGV-1676729_25	phrog_18725	55.7	9.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-1676729_25	411902.CLOBOL_00123	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1676729_26	411902.CLOBOL_00122	95.9	2.57e-24	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1676729	Yes	20,781	36	51	1
UHGV-1771582	No	17,355	37	41	1