Viral OTU vOTU-039089

vOTU: vOTU-039089

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-039089
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vOTU-039089
Host Lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Dialisteraceae → Dialister → Dialister invisus
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1426307
Biosample ID	SAMN03283274
Length	34,044 bps
CheckV Completeness	53.44% (Medium-quality)
CDS Count	51
CDS Density	88.82%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1426307_1	phrog_4209	43.6	0.0000000000015	tail fiber protein	tail
eggNOG-mapper	UHGV-1426307_1	568816.Acin_1301	61.2	0.000000132	tail collar domain protein	N/A
COG	UHGV-1426307_1	COG4675	N/A	N/A	Phage tail collar domain	N/A
eggNOG-mapper	UHGV-1426307_2	1150626.PHAMO_80093	88.6	3.87e-16	extracellular polysaccharide biosynthetic process	N/A
COG	UHGV-1426307_2	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
structural_annotation	UHGV-1426307_2	PF05660,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_3	phrog_5417	87.1	1.7e-25	N/A	unknown function
UniRef90	UHGV-1426307_3	UniRef90_H8FY63	171.0	0	Putative BcepGomrgp18	N/A
eggNOG-mapper	UHGV-1426307_3	1589747.A0A0B5A4F6_9CAUD	60.1	0.00000000263	N/A	N/A
structural_annotation	UHGV-1426307_3	PF12571	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426307_4	1232428.CAVO010000067_gene421	702.0	0	cellulase activity	N/A
COG	UHGV-1426307_4	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1426307_4	PF18001,PF01828,PF16389,MF_01905,NF010681,COG3401,COG3506	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426307_5	1485543.JMME01000020_gene785	149.0	3.64338e-44	N/A	N/A
structural_annotation	UHGV-1426307_5	PF20387	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426307_6	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_7	phrog_1328	129.6	4.8e-39	major head protein	head and packaging
UniRef90	UHGV-1426307_7	UniRef90_UPI000413677B	625.0	0	N/A	N/A
eggNOG-mapper	UHGV-1426307_7	1232428.CAVO010000067_gene423	625.0	0	N/A	N/A
Pfam	UHGV-1426307_7	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1426307_7	PF17236,MF_04133,NF033394,COG4834	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1426307_8	1232428.CAVO010000067_gene424	238.0	0	N/A	N/A
PHROG	UHGV-1426307_10	phrog_1216	278.8	0	portal protein	head and packaging
UniRef90	UHGV-1426307_10	UniRef90_A0A0U1L376	483.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1426307_10	1232428.CAVO010000067_gene425	1043.0	0	Membrane	N/A
COG	UHGV-1426307_10	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1426307_10	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_11	phrog_2	78.1	1.6e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1426307_11	UniRef90_A0A6M3IX88	146.0	1.3e-34	Putative terminase	N/A
eggNOG-mapper	UHGV-1426307_11	1232428.CAVO010000067_gene427	816.0	0	DNA packaging	N/A
COG	UHGV-1426307_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1426307_11	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_12	phrog_309	119.6	1.8e-35	terminase small subunit	head and packaging
UniRef90	UHGV-1426307_12	UniRef90_A0A514LF90	112.0	1.04e-28	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1426307_12	742733.HMPREF9469_01828	99.4	1.98e-24	transposase activity	N/A
COG	UHGV-1426307_12	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
KOfam	UHGV-1426307_13	K19158	132.0	2.8e-39	yoeB; toxin YoeB [EC:3.1.-.-]	N/A
PHROG	UHGV-1426307_13	phrog_1213	56.7	4.9e-16	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1426307_13	UniRef90_A0A1Y4VFJ2	168.0	0	Putative mRNA interferase YoeB	N/A
eggNOG-mapper	UHGV-1426307_13	525282.HMPREF0391_11167	164.0	0	Addiction module toxin, Txe YoeB family	N/A
Pfam	UHGV-1426307_13	PF06769	N/A	N/A	YoeB-like toxin of bacterial type II toxin-antitoxin system	YoeB_toxin
NCBIFam	UHGV-1426307_13	TIGR02116.1	N/A	N/A	Txe/YoeB family addiction module toxin	N/A
COG	UHGV-1426307_13	COG4115	N/A	N/A	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	N/A
structural_annotation	UHGV-1426307_13	PF06769,TIGR02116,COG4115	N/A	N/A	N/A	N/A
KOfam	UHGV-1426307_14	K07473	72.8	7.1e-21	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-1426307_14	phrog_2737	54.8	0.0000000000000012	N/A	unknown function
UniRef90	UHGV-1426307_14	UniRef90_R9L2D7	135.0	4.85001e-40	RelB/DinJ family addiction module antitoxin	N/A
eggNOG-mapper	UHGV-1426307_14	1235793.C809_00308	135.0	8.14e-41	RelB antitoxin	N/A
Pfam	UHGV-1426307_14	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-1426307_14	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-1426307_14	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-1426307_14	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_17	phrog_419	110.8	1.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-1426307_17	1134413.ANNK01000120_gene2032	102.0	5.21e-26	N/A	N/A
KOfam	UHGV-1426307_18	K01520	128.8	4.7e-38	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1426307_18	phrog_135	143.1	1.19951e-42	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426307_18	UniRef90_A0A2S0MAB6	176.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1426307_18	706434.HMPREF9429_00398	126.0	4.19e-35	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-1426307_18	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1426307_18	NF001862.0	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1426307_18	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1426307_18	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426307_20	UniRef90_UPI0005CAF2BA	145.0	9.63953e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1426307_20	1273103.NM10_01114	120.0	4.24e-33	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-1426307_20	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_22	phrog_11947	52.0	0.0000000000000054	N/A	unknown function
UniRef90	UHGV-1426307_24	UniRef90_UPI001903B752	53.9	0.0000000997	N/A	N/A
Pfam	UHGV-1426307_24	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1426307_24	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_25	phrog_2776	66.6	3.6e-19	N/A	unknown function
UniRef90	UHGV-1426307_25	UniRef90_UPI001961F47C	101.0	3.06e-24	MmcB family DNA repair protein	N/A
structural_annotation	UHGV-1426307_25	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_26	phrog_236	113.3	3.8e-33	nucleotide kinase	other
eggNOG-mapper	UHGV-1426307_26	227720.Q858M9_9CAUD	85.9	1.59e-18	N/A	N/A
Pfam	UHGV-1426307_26	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
Pfam	UHGV-1426307_26	PF11753	N/A	N/A	N/A	DUF3310
NCBIFam	UHGV-1426307_26	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
KOfam	UHGV-1426307_28	K03111	141.8	6.99949e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1426307_28	phrog_44	130.5	1.2e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426307_28	UniRef90_A0A355U095	129.0	5.74e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1426307_28	546271.Selsp_2087	118.0	2.23e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1426307_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1426307_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1426307_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1426307_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1426307_28	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_31	phrog_37395	135.1	5.70001e-40	N/A	unknown function
structural_annotation	UHGV-1426307_32	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_33	phrog_428	115.5	5.8e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426307_33	UniRef90_UPI0018C5ECB5	141.0	8.83e-37	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1426307_33	1273103.NM10_01164	130.0	2.19e-34	DnaD domain protein	N/A
Pfam	UHGV-1426307_33	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1426307_33	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-1426307_33	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1426307_33	PF09524,PF21312,MF_01819,TIGR02220,NF033788,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-1426307_34	K07455	305.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1426307_34	phrog_148	292.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426307_34	UniRef90_A0A346B143	393.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1426307_34	706434.HMPREF9429_00771	382.0	0	Recombinase, phage RecT family	N/A
Pfam	UHGV-1426307_34	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1426307_34	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1426307_34	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1426307_34	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_35	phrog_434	341.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426307_35	UniRef90_A0A346B2S6	414.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1426307_35	1111454.HMPREF1250_0282	376.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-1426307_35	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1426307_35	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1426307_35	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1426307_35	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1426307_36	UniRef90_A0A1C5TEN7	72.0	0.0000000000000429	Cell division suppressor protein YneA	N/A
Pfam	UHGV-1426307_36	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1426307_36	COG1388	N/A	N/A	LysM repeat	N/A
Pfam	UHGV-1426307_37	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1426307_37	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
UniRef90	UHGV-1426307_41	UniRef90_UPI0003018813	140.0	2.20004e-42	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1426307_41	536233.CLO_0858	73.6	1.71e-16	Helix-turn-helix	N/A
structural_annotation	UHGV-1426307_41	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1426307_42	K01356	132.6	4.1e-39	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1426307_42	phrog_4	126.4	2.4e-37	transcriptional repressor	transcription regulation
UniRef90	UHGV-1426307_42	UniRef90_F9MML6	269.0	0	Peptidase S24-like protein	N/A
eggNOG-mapper	UHGV-1426307_42	1000569.HMPREF1040_0220	269.0	0	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1426307_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1426307_42	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1426307_42	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1426307_42	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426307_43	PF05800	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_44	phrog_29304	96.4	1.5e-28	N/A	unknown function
UniRef90	UHGV-1426307_44	UniRef90_UPI0003782F75	114.0	1.34e-31	type II toxin-antitoxin system MqsA family antitoxin	N/A
eggNOG-mapper	UHGV-1426307_44	1410626.JHXB01000002_gene633	105.0	3.49e-29	N/A	N/A
NCBIFam	UHGV-1426307_44	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
structural_annotation	UHGV-1426307_44	PF14122,TIGR03829	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_45	phrog_2158	259.2	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1426307_45	UniRef90_A0A133SGU6	473.0	0	Abi-like protein	N/A
eggNOG-mapper	UHGV-1426307_45	927704.SELR_16790	348.0	0	Abi-like protein	N/A
PADLOC	UHGV-1426307_45	AbiD	173.0	0	AbiD	Abi
Pfam	UHGV-1426307_45	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1426307_45	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-1426307_45	PF07751,COG4823	N/A	N/A	N/A	N/A
KOfam	UHGV-1426307_47	K04095	52.0	0.000000000000012	fic; cell filamentation protein	N/A
PHROG	UHGV-1426307_47	phrog_11900	231.0	0	N/A	unknown function
UniRef90	UHGV-1426307_47	UniRef90_A0A2A2IPV3	409.0	0	Cell filamentation protein Fic	N/A
eggNOG-mapper	UHGV-1426307_47	1232428.CAVO010000058_gene1868	385.0	0	filamentation induced by cAMP protein Fic	N/A
Pfam	UHGV-1426307_47	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-1426307_47	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-1426307_47	PF02661,TIGR02613,COG3177	N/A	N/A	N/A	N/A
PHROG	UHGV-1426307_48	phrog_10226	245.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1426307_48	696281.Desru_1108	209.0	0	N/A	N/A
structural_annotation	UHGV-1426307_48	PF01878,COG4127	N/A	N/A	N/A	N/A
KOfam	UHGV-1426307_50	K14059	212.9	0	int; integrase	N/A
PHROG	UHGV-1426307_50	phrog_1	197.1	0	integrase	integration and excision
UniRef90	UHGV-1426307_50	UniRef90_A0A1C5TDI5	451.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1426307_50	706434.HMPREF9429_00599	317.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1426307_50	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1426307_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1426307_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1426307_50	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
COG	UHGV-1426307_51	COG3566	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1426307	Yes	34,044	43	53	1
UHGV-0135092	No	34,044	43	53	1
UHGV-1682317	No	21,024	43	33	1