Viral OTU vOTU-041414

vOTU: vOTU-041414

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-041414
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00920 → vOTU-041414
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0116733
Biosample ID	SAMEA3879599
Length	20,727 bps
CheckV Completeness	57.05% (Medium-quality)
CDS Count	47
CDS Density	88.35%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0116733_1	UniRef90_A0A1G4FQI1	202.0	0	Putative N-acetyltransferase YvbK	N/A
eggNOG-mapper	UHGV-0116733_1	428125.CLOLEP_00117	291.0	0	Acetyltransferase (GNAT) domain	N/A
Pfam	UHGV-0116733_1	PF13508	N/A	N/A	Acetyltransferase (GNAT) domain	Acetyltransf_7
COG	UHGV-0116733_1	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-0116733_1	PF12568,MF_02210,NF007025,COG0456	N/A	N/A	N/A	N/A
KOfam	UHGV-0116733_2	K01880	434.1	0	GARS, glyS1; glycyl-tRNA synthetase [EC:6.1.1.14]	N/A
UniRef90	UHGV-0116733_2	UniRef90_A0A855A6C6	913.0	0	Glycine--tRNA ligase	N/A
eggNOG-mapper	UHGV-0116733_2	428125.CLOLEP_00119	897.0	0	Catalyzes the attachment of glycine to tRNA(Gly)	N/A
Pfam	UHGV-0116733_2	PF03129	N/A	N/A	Anticodon binding domain	HGTP_anticodon
NCBIFam	UHGV-0116733_2	NF003211.1	N/A	N/A	glycine--tRNA ligase	N/A
COG	UHGV-0116733_2	COG0423	N/A	N/A	Glycyl-tRNA synthetase, class II	N/A
HAMAP	UHGV-0116733_2	MF_00253_B	N/A	N/A	Glycine--tRNA ligase [glyQS]	N/A
KOfam	UHGV-0116733_3	K14059	207.0	0	int; integrase	N/A
PHROG	UHGV-0116733_3	phrog_1	190.3	0	integrase	integration and excision
UniRef90	UHGV-0116733_3	UniRef90_A0A1C6FNS1	792.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0116733_3	428125.CLOLEP_01837	132.0	8.39e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0116733_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0116733_3	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0116733_3	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_4	phrog_8043	51.0	0.000000000000016	N/A	unknown function
UniRef90	UHGV-0116733_4	UniRef90_A0A374JQK3	128.0	4.53e-33	HIRAN domain-containing protein	N/A
eggNOG-mapper	UHGV-0116733_4	411471.SUBVAR_05817	126.0	1.08e-32	N/A	N/A
structural_annotation	UHGV-0116733_4	PF08797	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_6	phrog_87	78.8	5.8e-23	metallo-protease	other
UniRef90	UHGV-0116733_6	UniRef90_A7VVX5	280.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0116733_6	428125.CLOLEP_02739	280.0	0	N/A	N/A
Pfam	UHGV-0116733_6	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0116733_6	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0116733_6	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_7	phrog_8	45.9	0.0000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0116733_7	UniRef90_A0A1C6FNL9	231.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0116733_7	428125.CLOLEP_02738	164.0	0	SMART helix-turn-helix domain protein	N/A
Pfam	UHGV-0116733_7	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0116733_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0116733_7	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0116733_8	UniRef90_UPI001D00CEEC	103.0	2.27e-27	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0116733_8	428125.CLOLEP_02737	142.0	9.80909e-44	N/A	N/A
structural_annotation	UHGV-0116733_8	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_10	phrog_750	107.4	7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0116733_10	478749.BRYFOR_08527	67.4	0.000000000000433	N/A	N/A
PHROG	UHGV-0116733_11	phrog_4392	47.9	0.00000000000021	N/A	unknown function
UniRef90	UHGV-0116733_11	UniRef90_UPI000E489044	103.0	5.76e-26	membrane lipoprotein lipid attachment site-containing protein	N/A
UniRef90	UHGV-0116733_15	UniRef90_UPI00164AC43D	67.0	0.000000000000666	N/A	N/A
Pfam	UHGV-0116733_15	PF20124	N/A	N/A	N/A	DUF6514
structural_annotation	UHGV-0116733_15	PF20124	N/A	N/A	N/A	N/A
UniRef90	UHGV-0116733_16	UniRef90_A0A7U9IDR3	93.6	2.18e-23	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0116733_16	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0116733_16	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
KOfam	UHGV-0116733_18	K22300	54.4	0.0000000000000029	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0116733_18	phrog_8	77.6	2.4e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0116733_18	UniRef90_A0A372WZL5	103.0	1.87e-27	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0116733_18	864563.HMPREF9166_0595	80.5	4.62e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0116733_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0116733_18	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0116733_18	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0116733_19	K07729	54.4	0.000000000000003	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0116733_19	phrog_8	44.0	0.0000000000054	transcriptional regulator	transcription regulation
UniRef90	UHGV-0116733_19	UniRef90_A0A372WXU8	71.6	0.00000000000000276	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0116733_19	768486.EHR_02755	63.2	0.00000000000113	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0116733_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0116733_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0116733_19	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_24	phrog_2872	212.6	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116733_24	UniRef90_A0A412AWF4	393.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0116733_24	1345695.CLSA_c30180	245.0	0	AAA domain	N/A
Pfam	UHGV-0116733_24	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0116733_24	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_26	phrog_18107	81.7	1.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0116733_26	476272.RUMHYD_02831	176.0	0	N/A	N/A
structural_annotation	UHGV-0116733_26	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_27	phrog_3490	126.4	1.9e-37	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116733_27	UniRef90_R6N0P8	335.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0116733_27	476272.RUMHYD_01740	207.0	0	ERCC4 domain	N/A
Pfam	UHGV-0116733_27	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-0116733_27	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-0116733_27	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_29	phrog_2514	97.6	1.4e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0116733_29	742733.HMPREF9469_01845	115.0	2.63e-29	N/A	N/A
structural_annotation	UHGV-0116733_29	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0116733_30	K17680	288.5	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0116733_30	phrog_239	291.7	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116733_30	UniRef90_R6P3P1	1191.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0116733_30	476272.RUMHYD_02834	548.0	0	N/A	N/A
Pfam	UHGV-0116733_30	PF06745	N/A	N/A	KaiC	ATPase
COG	UHGV-0116733_30	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0116733_30	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0116733_33	phrog_21034	43.1	0.0000000000084	N/A	unknown function
eggNOG-mapper	UHGV-0116733_33	379066.GAU_1809	50.4	0.000000387	N/A	N/A
PHROG	UHGV-0116733_34	phrog_599	44.5	0.0000000000032	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0116733_34	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0116733_34	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-0116733_36	phrog_22543	44.2	0.0000000000038	N/A	unknown function
UniRef90	UHGV-0116733_38	UniRef90_UPI001C3A10B1	67.0	0.00000000000755	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0116733_38	742738.HMPREF9460_04055	63.9	0.0000000000129	N/A	N/A
PHROG	UHGV-0116733_40	phrog_924	42.6	0.0000000000089	N/A	unknown function
UniRef90	UHGV-0116733_40	UniRef90_A0A412AV74	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0116733_40	1316932.MHH_c17560	51.6	0.00000366	N/A	N/A
Pfam	UHGV-0116733_40	PF04448	N/A	N/A	N/A	DUF551

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0116733	Yes	20,727	42	57	1
UHGV-2009162	No	16,199	42	45	1