Viral OTU vOTU-042202

vOTU: vOTU-042202

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-042202
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00106 → vOTU-042202
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-2178190
Biosample ID	SAMEA3449348
Length	34,542 bps
CheckV Completeness	78.26% (Medium-quality)
CDS Count	49
CDS Density	91.63%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-2178190_1	693746.OBV_43240	168.0	0	N/A	N/A
COG	UHGV-2178190_1	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-2178190_3	K00986	276.3	0	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-2178190_3	phrog_1423	284.3	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2178190_3	UniRef90_A0A413CP59	783.0	0	Group II intron reverse transcriptase/maturase	N/A
eggNOG-mapper	UHGV-2178190_3	994573.T472_0216495	487.0	0	Reverse transcriptase	N/A
PADLOC	UHGV-2178190_3	PtuC2_00005	454.7	0	Reverse transcriptase	Septu
Pfam	UHGV-2178190_3	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
NCBIFam	UHGV-2178190_3	TIGR04416.1	N/A	N/A	group II intron reverse transcriptase/maturase	N/A
COG	UHGV-2178190_3	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-2178190_3	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
KOfam	UHGV-2178190_4	K00558	230.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-2178190_4	phrog_116	271.2	0	DNA methyltransferase	other
UniRef90	UHGV-2178190_4	UniRef90_A0A1C5S2H5	899.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-2178190_4	1235800.C819_02255	665.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-2178190_4	MTase_II_00020	112.0	3.1e-37	Type II methyltransferase	RM
Pfam	UHGV-2178190_4	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-2178190_4	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-2178190_4	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_5	phrog_59	71.2	1.2e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2178190_5	UniRef90_R7CC66	306.0	0	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-2178190_5	1410650.JHWL01000037_gene604	151.0	9.24857e-44	N/A	N/A
PADLOC	UHGV-2178190_5	HEase_00016	52.9	2.8e-16	homing endonuclease	RM
Pfam	UHGV-2178190_5	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
structural_annotation	UHGV-2178190_5	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
UniRef90	UHGV-2178190_6	UniRef90_UPI001F196BAE	530.0	0	N/A	N/A
eggNOG-mapper	UHGV-2178190_6	411468.CLOSCI_02324	522.0	0	N/A	N/A
Pfam	UHGV-2178190_6	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-2178190_6	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_10	phrog_18791	92.2	2.2e-27	N/A	unknown function
UniRef90	UHGV-2178190_13	UniRef90_A0A415TX35	53.1	0.00000943	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-2178190_13	397290.C810_01492	56.6	0.0000000595	N/A	N/A
PHROG	UHGV-2178190_14	phrog_8684	100.9	1.4e-30	N/A	unknown function
UniRef90	UHGV-2178190_14	UniRef90_UPI001D033076	186.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-2178190_14	742735.HMPREF9467_00920	89.0	5.4e-21	YopX protein	N/A
Pfam	UHGV-2178190_14	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-2178190_14	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-2178190_14	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2178190_15	397290.C810_01514	61.2	0.000000000358	N/A	N/A
KOfam	UHGV-2178190_17	K04763	199.8	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-2178190_17	phrog_1	176.2	0	integrase	integration and excision
UniRef90	UHGV-2178190_17	UniRef90_A0A7U9NLF9	315.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-2178190_17	1304866.K413DRAFT_3024	207.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2178190_17	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-2178190_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2178190_17	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2178190_17	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-2178190_19	UniRef90_UPI001C02D4D3	107.0	1.01e-28	ABC transporter ATP-binding protein	N/A
KOfam	UHGV-2178190_20	K01356	48.2	0.00000000000023	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-2178190_20	phrog_3502	45.1	0.0000000000019	N/A	unknown function
UniRef90	UHGV-2178190_20	UniRef90_A0A6N3H8N1	122.0	1.06e-34	LexA repressor	N/A
eggNOG-mapper	UHGV-2178190_20	1297617.JPJD01000025_gene1172	65.1	0.00000000000851	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-2178190_20	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-2178190_20	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-2178190_20	PF01726,MF_00732,TIGR02944,COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_21	phrog_8680	262.3	0	N/A	unknown function
UniRef90	UHGV-2178190_21	UniRef90_A0A3R6K733	414.0	0	N/A	N/A
eggNOG-mapper	UHGV-2178190_21	411470.RUMGNA_02208	282.0	0	N/A	N/A
Pfam	UHGV-2178190_21	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-2178190_21	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_23	phrog_9479	175.4	0	N/A	unknown function
eggNOG-mapper	UHGV-2178190_23	511680.BUTYVIB_01226	60.8	0.000000000463	N/A	N/A
structural_annotation	UHGV-2178190_23	PF15529	N/A	N/A	N/A	N/A
KOfam	UHGV-2178190_24	K06909	223.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2178190_24	phrog_5653	95.2	7.8e-28	terminase large subunit	head and packaging
UniRef90	UHGV-2178190_24	UniRef90_A0A3R6H2I4	1117.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-2178190_24	33035.JPJF01000106_gene3136	290.0	0	Terminase small subunit	N/A
Pfam	UHGV-2178190_24	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-2178190_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-2178190_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-2178190_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2178190_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2178190_24	PF04466,PF17288,PF06056,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_25	phrog_1233	89.2	4.9e-26	N/A	unknown function
UniRef90	UHGV-2178190_25	UniRef90_UPI001C39EFB9	178.0	0	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-2178190_25	357809.Cphy_2967	100.0	4.53e-25	N/A	N/A
PHROG	UHGV-2178190_26	phrog_28328	110.8	4.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-2178190_26	428125.CLOLEP_01381	47.8	0.00000569	N/A	N/A
PHROG	UHGV-2178190_27	phrog_533	248.5	0	portal protein	head and packaging
UniRef90	UHGV-2178190_27	UniRef90_A0A3B9CD47	786.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2178190_27	476272.RUMHYD_01758	333.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-2178190_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_28	phrog_556	82.4	4.1e-24	minor head protein	head and packaging
UniRef90	UHGV-2178190_28	UniRef90_UPI000E4A8F9F	146.0	1.19951e-42	minor capsid protein	N/A
eggNOG-mapper	UHGV-2178190_28	1449050.JNLE01000003_gene3886	54.3	0.000000237	N/A	N/A
Pfam	UHGV-2178190_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2178190_28	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_29	phrog_581	224.1	0	minor head protein	head and packaging
UniRef90	UHGV-2178190_29	UniRef90_UPI000E4E3D5A	518.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-2178190_29	663278.Ethha_0499	172.0	1.4013e-45	N/A	N/A
Pfam	UHGV-2178190_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-2178190_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2178190_29	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2178190_30	1539298.JO41_08210	58.2	0.0000000876	Phage minor structural protein GP20	N/A
PHROG	UHGV-2178190_31	phrog_247	277.9	0	major head protein	head and packaging
UniRef90	UHGV-2178190_31	UniRef90_A0A3R6GNQ1	595.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-2178190_31	536233.CLO_0886	400.0	0	N/A	N/A
Pfam	UHGV-2178190_31	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
COG	UHGV-2178190_31	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-2178190_31	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_32	phrog_541	105.0	4.7e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-2178190_32	397290.C810_05226	75.1	0.00000000000000561	N/A	N/A
PHROG	UHGV-2178190_33	phrog_1048	120.9	4e-36	N/A	unknown function
UniRef90	UHGV-2178190_33	UniRef90_UPI00189A7662	321.0	0	N/A	N/A
eggNOG-mapper	UHGV-2178190_33	588581.Cpap_1521	155.0	0	N/A	N/A
Pfam	UHGV-2178190_33	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-2178190_33	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-2178190_33	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_34	phrog_3366	109.4	2.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-2178190_34	476272.RUMHYD_01779	84.0	1.58e-18	N/A	N/A
structural_annotation	UHGV-2178190_34	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_35	phrog_3266	48.2	0.00000000000015	tail completion	connector
eggNOG-mapper	UHGV-2178190_35	397290.C810_05232	53.5	0.000000761	N/A	N/A
structural_annotation	UHGV-2178190_35	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_36	phrog_3099	82.9	4.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-2178190_36	931276.Cspa_c07510	51.2	0.00000806	N/A	N/A
structural_annotation	UHGV-2178190_36	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-2178190_37	UniRef90_A0A412KF72	176.0	0	RNA polymerase subunit sigma	N/A
structural_annotation	UHGV-2178190_37	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_38	phrog_706	129.5	2.1e-38	N/A	unknown function
UniRef90	UHGV-2178190_38	UniRef90_C7GBZ7	351.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-2178190_38	1235790.C805_00084	133.0	2.12e-36	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2178190_38	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2178190_38	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_39	phrog_1535	129.6	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-2178190_39	1235797.C816_04182	117.0	5.08e-24	SLT domain	N/A
COG	UHGV-2178190_39	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_40	phrog_1194	51.8	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-2178190_40	1235790.C805_00088	61.2	0.000000000514	N/A	N/A
Pfam	UHGV-2178190_40	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-2178190_40	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_41	phrog_18190	592.5	0	N/A	unknown function
UniRef90	UHGV-2178190_41	UniRef90_UPI001C01E293	555.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-2178190_41	397290.C810_01435	394.0	0	N/A	N/A
structural_annotation	UHGV-2178190_41	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_42	phrog_18444	46.3	0.0000000000006	N/A	unknown function
eggNOG-mapper	UHGV-2178190_42	931276.Cspa_c07570	45.8	0.00000963	N/A	N/A
PHROG	UHGV-2178190_43	phrog_17196	176.4	0	kinase	other
eggNOG-mapper	UHGV-2178190_43	483218.BACPEC_01141	198.0	0	N/A	N/A
structural_annotation	UHGV-2178190_43	PF19537,PF13619,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-2178190_44	phrog_25620	40.8	0.000000000016	tail collar fiber protein	tail
UniRef90	UHGV-2178190_44	UniRef90_UPI00164A2069	287.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-2178190_44	33035.JPJF01000033_gene2261	74.7	0.0000000000229	tail collar domain protein	N/A
COG	UHGV-2178190_44	COG4675	N/A	N/A	Phage tail collar domain	N/A
Pfam	UHGV-2178190_46	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-2178190_46	PF09693,TIGR01669	N/A	N/A	N/A	N/A
UniRef90	UHGV-2178190_47	UniRef90_UPI0013C7D128	62.8	0.0000000000271	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-2178190_47	1345695.CLSA_c29710	54.3	0.0000000101	Haemolysin XhlA	N/A
Pfam	UHGV-2178190_47	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
PHROG	UHGV-2178190_48	phrog_443	50.8	0.000000000000039	holin	lysis
UniRef90	UHGV-2178190_48	UniRef90_UPI001570A68C	92.4	9.75e-23	holin	N/A
eggNOG-mapper	UHGV-2178190_48	742733.HMPREF9469_01797	81.6	2.53e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2178190_48	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
KOfam	UHGV-2178190_49	K07273	95.9	5.3e-28	acm; lysozyme	N/A
PHROG	UHGV-2178190_49	phrog_291	77.6	1.9e-22	endolysin	lysis
UniRef90	UHGV-2178190_49	UniRef90_A0A1T4KE67	70.9	0.0000000000545	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-2178190_49	622312.ROSEINA2194_02165	119.0	8.36e-28	Hydrolase Family 25	N/A
Pfam	UHGV-2178190_49	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-2178190_49	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2178190	Yes	34,542	44	78	1
UHGV-0086663	No	28,916	43	65	1