Viral OTU vOTU-042443

vOTU: vOTU-042443

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-042443
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 → vSUBFAM-05284 → vGENUS-11095 → vOTU-042443
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Ruthenibacterium → Ruthenibacterium lactatiformans
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0119443
Biosample ID	SAMEA4378265
Length	33,017 bps
CheckV Completeness	89.42% (Medium-quality)
CDS Count	51
CDS Density	89.85%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 89.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0119443_1	K01356	91.8	1.2e-26	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0119443_1	phrog_4	105.7	5.5e-31	transcriptional repressor	transcription regulation
UniRef90	UHGV-0119443_1	UniRef90_UPI00196875A4	480.0	0	LexA family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0119443_1	665956.HMPREF1032_04076	147.0	7.26994e-41	Peptidase S24-like	N/A
Pfam	UHGV-0119443_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0119443_1	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0119443_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0119443_1	PF00717,PF01381,MF_00015,NF041951,NF007621,COG2932	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119443_2	UniRef90_UPI0019671B18	149.0	1.4013e-45	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0119443_2	1430331.EP10_02425	50.1	0.000000379	N/A	N/A
Pfam	UHGV-0119443_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0119443_2	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_10	phrog_310	327.6	0	transposase	integration and excision
UniRef90	UHGV-0119443_10	UniRef90_D1PRI1	545.0	0	Mu transposase domain protein	N/A
eggNOG-mapper	UHGV-0119443_10	665956.HMPREF1032_02979	1159.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0119443_10	TnsB_0_V-K	49.8	0.000000000000045	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0119443_10	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0119443_10	PF02914	N/A	N/A	Bacteriophage Mu transposase	DDE_2
Pfam	UHGV-0119443_10	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0119443_10	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0119443_10	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0119443_11	K07132	67.8	1.7e-19	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0119443_11	phrog_296	124.5	1.1e-36	DNA transposition protein	integration and excision
UniRef90	UHGV-0119443_11	UniRef90_G9RTU4	592.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0119443_11	665956.HMPREF1032_02978	592.0	0	AAA domain	N/A
Pfam	UHGV-0119443_11	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0119443_11	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
PHROG	UHGV-0119443_14	phrog_36365	71.4	1.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0119443_14	665956.HMPREF1032_02975	114.0	8.92e-33	N/A	N/A
PHROG	UHGV-0119443_16	phrog_2717	52.7	0.0000000000000074	N/A	unknown function
eggNOG-mapper	UHGV-0119443_16	665956.HMPREF1032_04088	250.0	0	N/A	N/A
UniRef90	UHGV-0119443_17	UniRef90_UPI001967CCF1	77.8	5.15e-16	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0119443_17	PF04218,NF040595,COG1710	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0119443_21	cluster_167795	140.0	0	NA	N/A
PHROG	UHGV-0119443_22	phrog_491	98.5	6.2e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119443_22	UniRef90_A0A6N3F7T2	270.0	0	Bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-0119443_22	665956.HMPREF1032_02965	331.0	0	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0119443_22	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
COG	UHGV-0119443_22	COG4396	N/A	N/A	Mu-like prophage host-nuclease inhibitor protein Gam	N/A
structural_annotation	UHGV-0119443_22	PF07352,COG4396	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_23	phrog_286	71.9	9.7e-21	N/A	unknown function
UniRef90	UHGV-0119443_23	UniRef90_A0A372V3L1	292.0	0	Regulatory protein GemA	N/A
eggNOG-mapper	UHGV-0119443_23	665956.HMPREF1032_02964	338.0	0	N/A	N/A
Pfam	UHGV-0119443_23	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0119443_23	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_24	phrog_836	54.4	0.0000000000000024	late transcriptional activator	transcription regulation
UniRef90	UHGV-0119443_24	UniRef90_G9RTS9	224.0	0	Mor domain-containing protein	N/A
eggNOG-mapper	UHGV-0119443_24	665956.HMPREF1032_02963	224.0	0	Mor transcription activator family	N/A
Pfam	UHGV-0119443_24	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0119443_24	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0119443_24	PF08765,COG5566	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119443_25	UniRef90_A0A372V349	163.0	0	N/A	N/A
eggNOG-mapper	UHGV-0119443_25	665956.HMPREF1032_01633	143.0	8.33773e-43	N/A	N/A
PHROG	UHGV-0119443_26	phrog_25462	52.4	0.0000000000000099	N/A	unknown function
eggNOG-mapper	UHGV-0119443_26	1160721.RBI_II00547	66.6	0.000000000000933	N/A	N/A
structural_annotation	UHGV-0119443_26	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_27	phrog_426	77.8	2e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0119443_27	UniRef90_A0A6I2UDS2	289.0	0	N/A	N/A
eggNOG-mapper	UHGV-0119443_27	665956.HMPREF1032_02960	348.0	0	N/A	N/A
Pfam	UHGV-0119443_27	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0119443_27	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-0119443_28	K02601	98.3	9.4e-29	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-0119443_28	phrog_6386	91.9	6.5e-27	transcription antiterminator	transcription regulation
UniRef90	UHGV-0119443_28	UniRef90_G9RTS5	332.0	0	NGN domain-containing protein	N/A
eggNOG-mapper	UHGV-0119443_28	665956.HMPREF1032_02959	332.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-0119443_28	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
Pfam	UHGV-0119443_28	PF00467	N/A	N/A	KOW motif	KOW
COG	UHGV-0119443_28	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0119443_28	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119443_29	UniRef90_A0A1Y4TKH5	96.3	9.54e-24	HTH_Tnp_1_2 domain-containing protein	N/A
KOfam	UHGV-0119443_30	K06909	388.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0119443_30	phrog_3717	159.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0119443_30	UniRef90_G9RTS3	802.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0119443_30	665956.HMPREF1032_02957	802.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0119443_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0119443_30	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0119443_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0119443_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0119443_30	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_32	phrog_533	148.9	2.8026e-44	portal protein	head and packaging
UniRef90	UHGV-0119443_32	UniRef90_G9RTS1	850.0	0	A118 family phage portal protein, putative	N/A
eggNOG-mapper	UHGV-0119443_32	411471.SUBVAR_06996	414.0	0	N/A	N/A
structural_annotation	UHGV-0119443_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0119443_33	K11044	64.1	8.8e-19	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-0119443_33	phrog_581	171.2	0	minor head protein	head and packaging
UniRef90	UHGV-0119443_33	UniRef90_A0A6N3F6N5	917.0	0	Epidermal cell differentiation inhibitor	N/A
eggNOG-mapper	UHGV-0119443_33	665956.HMPREF1032_02954	727.0	0	N/A	N/A
Pfam	UHGV-0119443_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0119443_33	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-0119443_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119443_33	PF06152,PF03496,MF_04139,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_35	phrog_194	71.1	1.9e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0119443_35	UniRef90_A0A6N3F6J3	238.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0119443_35	665956.HMPREF1032_02952	286.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0119443_35	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0119443_35	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_36	phrog_267	106.5	2.5e-31	major head protein	head and packaging
UniRef90	UHGV-0119443_36	UniRef90_A0A4P8IA69	379.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0119443_36	748224.HMPREF9436_03335	464.0	0	N/A	N/A
structural_annotation	UHGV-0119443_36	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_37	phrog_541	93.7	1.6e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0119443_37	641112.ACOK01000073_gene2896	60.8	0.000000000566	N/A	N/A
PHROG	UHGV-0119443_38	phrog_3366	58.3	3.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0119443_38	411471.SUBVAR_06991	75.9	3.7e-16	N/A	N/A
Pfam	UHGV-0119443_38	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0119443_38	PF20536,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_39	phrog_556	120.7	6.1e-36	minor head protein	head and packaging
UniRef90	UHGV-0119443_39	UniRef90_UPI001D0AB638	130.0	1.3e-36	minor capsid protein	N/A
eggNOG-mapper	UHGV-0119443_39	665956.HMPREF1032_02947	221.0	0	Minor capsid protein	N/A
structural_annotation	UHGV-0119443_39	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_40	phrog_3266	142.6	1.3004e-42	tail completion	connector
UniRef90	UHGV-0119443_40	UniRef90_A0A355D907	115.0	2.25e-30	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0119443_40	665956.HMPREF1032_02946	274.0	0	N/A	N/A
structural_annotation	UHGV-0119443_40	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_41	phrog_820	71.6	9.3e-21	major tail protein	tail
UniRef90	UHGV-0119443_41	UniRef90_A0A174M1L1	139.0	7.02e-38	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0119443_41	665956.HMPREF1032_02945	255.0	0	N/A	N/A
structural_annotation	UHGV-0119443_41	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_42	phrog_4450	70.8	2.3e-20	N/A	unknown function
UniRef90	UHGV-0119443_42	UniRef90_A0A846J672	53.9	0.000000902	AP endonuclease	N/A
Pfam	UHGV-0119443_42	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0119443_42	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_43	phrog_706	142.4	2.40042e-42	N/A	unknown function
UniRef90	UHGV-0119443_43	UniRef90_A0A6N3F5V9	297.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0119443_43	665956.HMPREF1032_02943	234.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0119443_43	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0119443_43	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_44	phrog_1686	363.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0119443_44	UniRef90_G9RTQ8	1379.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-0119443_44	665956.HMPREF1032_02942	1379.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0119443_44	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0119443_44	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0119443_44	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0119443_44	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_45	phrog_33	80.3	4.2e-23	distal tail protein Dit	tail
UniRef90	UHGV-0119443_45	UniRef90_A0A6N3F5Z2	478.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0119443_45	665956.HMPREF1032_02941	470.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0119443_45	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_46	phrog_538	190.8	0	minor tail protein	tail
UniRef90	UHGV-0119443_46	UniRef90_UPI000C7C9115	420.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0119443_46	665956.HMPREF1032_02940	583.0	0	N/A	N/A
Pfam	UHGV-0119443_46	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0119443_46	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_47	phrog_9534	151.3	8.40779e-45	head protein	head and packaging
eggNOG-mapper	UHGV-0119443_47	665956.HMPREF1032_02939	306.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0119443_47	PF21567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119443_49	PF11514	N/A	N/A	N/A	N/A
KOfam	UHGV-0119443_50	K19304	95.4	6.8e-28	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0119443_50	phrog_7767	81.6	8.3e-24	metallo-endopeptidase	other
UniRef90	UHGV-0119443_50	UniRef90_A0A0W7TLV7	412.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0119443_50	665956.HMPREF1032_00102	391.0	0	heme binding	N/A
Pfam	UHGV-0119443_50	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0119443_50	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0119443_50	PF01551,NF040883,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-0119443_51	phrog_20258	70.7	1.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0119443_51	665956.HMPREF1032_02927	210.0	0	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0119443	Yes	33,017	56	89	1
UHGV-0118487	No	21,786	58	56	1