Viral OTU vOTU-042804

vOTU: vOTU-042804

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-042804
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00264 → vSUBFAM-00917 → vGENUS-00826 → vSUBGEN-00396 → vOTU-042804
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-448 → CAG-448 sp003150135
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0015776
Biosample ID	SAMEA4766059
Length	36,495 bps
CheckV Completeness	100.00% (Complete)
CDS Count	47
CDS Density	94.46%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0015776_1	K00571	102.0	7.1e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0015776_1	phrog_67	96.9	2.5e-28	DNA methyltransferase	other
UniRef90	UHGV-0015776_1	UniRef90_UPI00055C7461	184.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0015776_1	1508644.SFBmNL_00843	129.0	5.42e-33	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0015776_1	MTase_II_00051	92.4	1.2e-26	Type II methyltransferase	RM
Pfam	UHGV-0015776_1	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0015776_1	COG2189	N/A	N/A	Adenine specific DNA methylase Mod	N/A
PHROG	UHGV-0015776_2	phrog_533	177.5	0	portal protein	head and packaging
UniRef90	UHGV-0015776_2	UniRef90_A0A1L7GTA3	79.0	0.000000000005	Capsid protein	N/A
eggNOG-mapper	UHGV-0015776_2	411473.RUMCAL_01924	101.0	2.08e-20	N/A	N/A
structural_annotation	UHGV-0015776_2	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0015776_3	K06909	102.1	6.7e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0015776_3	phrog_2	113.4	3.3e-33	terminase large subunit	head and packaging
UniRef90	UHGV-0015776_3	UniRef90_A0A0X8VA91	409.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0015776_3	642492.Clole_0814	351.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0015776_3	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0015776_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0015776_3	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0015776_6	K01160	64.9	2.1e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0015776_6	phrog_34	61.1	2.3e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015776_6	UniRef90_A0A843HIU7	120.0	8.91e-33	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0015776_6	796940.HMPREF9628_00163	94.4	3.28e-23	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0015776_6	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0015776_6	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0015776_6	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0015776_7	K00390	44.8	1e-18	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0015776_7	phrog_424	120.2	1.4e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0015776_7	UniRef90_R6RCD0	404.0	0	Putative phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0015776_7	397291.C804_05723	253.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0015776_7	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0015776_7	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0015776_7	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0015776_8	phrog_98	75.3	7.9e-22	N/A	unknown function
UniRef90	UHGV-0015776_8	UniRef90_K1SIW4	102.0	7.45e-26	Protein containing YopX protein domain protein (Fragment)	N/A
eggNOG-mapper	UHGV-0015776_8	1121097.JCM15093_2710	71.6	0.0000000000000387	YopX protein	N/A
Pfam	UHGV-0015776_8	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0015776_8	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
eggNOG-mapper	UHGV-0015776_9	411473.RUMCAL_02525	91.3	1.28e-22	N/A	N/A
KOfam	UHGV-0015776_10	K05925	92.1	6.8e-27	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0015776_10	phrog_359	234.7	0	DNA methyltransferase	other
UniRef90	UHGV-0015776_10	UniRef90_A0A417PE64	246.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0015776_10	1235792.C808_02259	209.0	0	MT-A70	N/A
PADLOC	UHGV-0015776_10	MTase_II_00048	217.6	0	Type II methyltransferase	RM
Pfam	UHGV-0015776_10	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0015776_10	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0015776_10	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A
PHROG	UHGV-0015776_11	phrog_9474	58.8	1.2e-16	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0015776_11	411483.FAEPRAA2165_01877	77.0	0.000000000000378	HNH endonuclease	N/A
COG	UHGV-0015776_11	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0015776_12	phrog_757	165.7	0	DNA methyltransferase	other
UniRef90	UHGV-0015776_12	UniRef90_A0A374BFJ7	250.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0015776_12	397290.C810_01487	246.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0015776_12	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0015776_12	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015776_13	UniRef90_A0A844U3V8	58.9	0.000000794	Leucine-rich repeat protein	N/A
COG	UHGV-0015776_13	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0015776_14	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-0015776_15	K03111	139.0	5.10003e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0015776_15	phrog_44	129.3	2.7e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015776_15	UniRef90_A0A316RXZ4	159.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0015776_15	699246.HMPREF0868_1385	120.0	2.06e-32	Single-strand binding protein family	N/A
Pfam	UHGV-0015776_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0015776_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0015776_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0015776_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0015776_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0015776_16	phrog_6244	41.0	0.000000000039	N/A	unknown function
PHROG	UHGV-0015776_17	phrog_155	81.5	1.1e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0015776_17	UniRef90_A0A1I7HAF1	174.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0015776_17	279808.SH1793	64.7	0.00000000101	ERF superfamily	N/A
Pfam	UHGV-0015776_17	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0015776_17	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0015776_23	phrog_8	45.3	0.0000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0015776_23	UniRef90_A0A212JT85	65.9	0.000000000021	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0015776_23	1045854.WKK_01115	52.0	0.000000539	sequence-specific DNA binding	N/A
Pfam	UHGV-0015776_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0015776_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0015776_23	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0015776_25	K14059	207.5	0	int; integrase	N/A
PHROG	UHGV-0015776_25	phrog_1	172.0	0	integrase	integration and excision
UniRef90	UHGV-0015776_25	UniRef90_U2QJL8	211.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0015776_25	1226322.HMPREF1545_00144	211.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0015776_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0015776_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0015776_25	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0015776_27	UniRef90_A0A345BNU6	144.0	1.12006e-41	Spore surface glycoprotein	N/A
structural_annotation	UHGV-0015776_27	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015776_28	445972.ANACOL_01880	62.4	0.00000000509	N/A	N/A
PHROG	UHGV-0015776_35	phrog_5302	76.4	3.8e-22	tail protein	tail
structural_annotation	UHGV-0015776_38	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0015776_44	33035.JPJF01000030_gene2294	166.0	0	N/A	N/A
structural_annotation	UHGV-0015776_44	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0015776_46	phrog_581	67.2	4.8e-21	minor head protein	head and packaging
UniRef90	UHGV-0015776_46	UniRef90_A0A2Z4GUI4	111.0	8.76e-24	Minor capsid protein 2	N/A
Pfam	UHGV-0015776_46	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0015776_46	COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0015776_47	K07319	107.4	1.8e-31	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0015776_47	phrog_67	96.3	3.8e-28	DNA methyltransferase	other
UniRef90	UHGV-0015776_47	UniRef90_R9KX02	76.3	0.00000000000000304	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0015776_47	1288484.APCS01000031_gene2368	80.5	1.27e-16	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0015776_47	MTase_II_00157	83.7	5.3e-24	Type II methyltransferase	RM
Pfam	UHGV-0015776_47	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0015776_47	COG0863	N/A	N/A	DNA modification methylase	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0015776	Yes	36,495	55	100	1