Viral OTU vOTU-043224

vOTU: vOTU-043224

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-043224
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00373 → vGENUS-00237 → vSUBGEN-00275 → vOTU-043224
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → SFJ001 → SFJ001 sp004555865
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0020467
Biosample ID	N/A
Length	44,337 bps
CheckV Completeness	100.00% (Complete)
CDS Count	69
CDS Density	91.52%
tRNA Count	3
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0020467_1	phrog_3136	75.7	5.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0020467_1	97139.C824_00742	54.3	0.000000138	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0020467_1	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
PHROG	UHGV-0020467_3	phrog_18716	154.0	0	N/A	unknown function
UniRef90	UHGV-0020467_3	UniRef90_A0A5B9YFW1	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020467_3	1508644.SFBmNL_00403	130.0	1.34e-36	N/A	N/A
Pfam	UHGV-0020467_3	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0020467_3	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_6	phrog_757	230.9	0	DNA methyltransferase	other
UniRef90	UHGV-0020467_6	UniRef90_UPI0006A41431	241.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0020467_6	1235790.C805_00032	251.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0020467_6	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0020467_6	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_8	phrog_236	81.2	2.5e-23	nucleotide kinase	other
UniRef90	UHGV-0020467_8	UniRef90_UPI000D110E3A	95.9	1.35e-23	N/A	N/A
eggNOG-mapper	UHGV-0020467_8	227720.Q858M9_9CAUD	64.7	0.00000000000317	N/A	N/A
Pfam	UHGV-0020467_8	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0020467_8	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-0020467_9	K01160	45.8	0.0000000000016	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0020467_9	phrog_1682	67.0	3e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_9	UniRef90_UPI0009406B47	99.8	1.18e-24	endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0020467_9	220668.lp_2433	98.2	7.96e-25	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
Pfam	UHGV-0020467_9	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0020467_9	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0020467_9	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0020467_10	K02314	230.2	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0020467_10	phrog_19	219.1	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_10	UniRef90_UPI001F1C052D	434.0	0	replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0020467_10	1203606.HMPREF1526_01325	165.0	8.68805e-44	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0020467_10	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0020467_10	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0020467_10	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0020467_10	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_11	phrog_270	116.7	2.6e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_11	UniRef90_A0A7X3DHC7	94.0	2.06e-19	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020467_11	1449126.JQKL01000003_gene1705	99.8	2.6e-22	ROK family	N/A
Pfam	UHGV-0020467_11	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0020467_11	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0020467_11	PF05584,MF_01819,TIGR01610,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0020467_12	K03111	120.7	1.9e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0020467_12	phrog_44	121.4	7.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_12	UniRef90_R6I6X7	128.0	4.93e-35	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0020467_12	748224.HMPREF9436_03359	117.0	1.74e-31	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0020467_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0020467_12	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0020467_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0020467_12	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0020467_12	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_13	phrog_7566	81.6	6.4e-24	N/A	unknown function
UniRef90	UHGV-0020467_13	UniRef90_A0A8D9UHC0	80.1	2.12e-17	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0020467_13	693746.OBV_25470	90.1	7.28e-22	N/A	N/A
PHROG	UHGV-0020467_14	phrog_72	62.3	6.5e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_14	UniRef90_UPI000C7BF263	168.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0020467_14	445972.ANACOL_01825	137.0	6.49e-39	N/A	N/A
structural_annotation	UHGV-0020467_14	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_15	phrog_7838	133.1	2e-39	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_15	UniRef90_A0A8D9UGW3	228.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0020467_15	742767.HMPREF9456_02052	179.0	0	N/A	N/A
structural_annotation	UHGV-0020467_15	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_16	phrog_253	114.0	1.2e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020467_16	UniRef90_A0A843H617	159.0	0	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0020467_16	1410670.JHXF01000015_gene2268	145.0	1.54984e-42	Siphovirus Gp157	N/A
Pfam	UHGV-0020467_16	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0020467_16	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020467_22	PF11034	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020467_23	596152.DesU5LDRAFT_1910	91.7	5.09e-20	N/A	N/A
structural_annotation	UHGV-0020467_23	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020467_24	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_25	phrog_463	207.3	0	anti-repressor	transcription regulation
UniRef90	UHGV-0020467_25	UniRef90_UPI00137B411D	275.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0020467_25	411490.ANACAC_00813	223.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0020467_25	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0020467_25	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0020467_25	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0020467_25	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_26	phrog_8	46.4	0.00000000000085	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020467_26	UniRef90_UPI001C009F10	112.0	3.1e-31	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0020467_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020467_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020467_26	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
COG	UHGV-0020467_27	COG4197	N/A	N/A	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily	N/A
structural_annotation	UHGV-0020467_27	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020467_29	324057.Pjdr2_0635	58.2	0.000000024	N/A	N/A
structural_annotation	UHGV-0020467_29	PF10358	N/A	N/A	N/A	N/A
Pfam	UHGV-0020467_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020467_30	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020467_30	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0020467_31	K14059	96.7	3.4e-28	int; integrase	N/A
PHROG	UHGV-0020467_31	phrog_1	102.5	5.1e-30	integrase	integration and excision
UniRef90	UHGV-0020467_31	UniRef90_UPI001897E1C8	155.0	4.34e-40	site-specific integrase	N/A
eggNOG-mapper	UHGV-0020467_31	411471.SUBVAR_07390	96.7	7e-20	Phage integrase family	N/A
Pfam	UHGV-0020467_31	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020467_31	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020467_31	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020467_32	UniRef90_A0A4R1R5G7	77.8	3.22e-18	Anaerobic ribonucleoside-triphosphate reductase-like protein	N/A
eggNOG-mapper	UHGV-0020467_32	658088.HMPREF0987_00997	77.0	1.09e-18	Anaerobic ribonucleoside-triphosphate reductase	N/A
Pfam	UHGV-0020467_32	PF13597	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	NRDD
COG	UHGV-0020467_32	COG1328	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	N/A
eggNOG-mapper	UHGV-0020467_33	1408437.JNJN01000060_gene452	191.0	1.4013e-45	heme binding	N/A
COG	UHGV-0020467_33	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0020467_35	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020467_38	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_39	phrog_1129	79.2	3.1e-23	holin	lysis
UniRef90	UHGV-0020467_39	UniRef90_A0A3R5ZDU6	135.0	6.15e-40	Holin	N/A
eggNOG-mapper	UHGV-0020467_39	1256908.HMPREF0373_00463	128.0	1.16e-37	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0020467_39	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0020467_39	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020467_40	97138.C820_00248	62.4	0.00000000000891	N/A	N/A
KOfam	UHGV-0020467_41	K07273	201.6	0	acm; lysozyme	N/A
PHROG	UHGV-0020467_41	phrog_291	158.9	0	endolysin	lysis
UniRef90	UHGV-0020467_41	UniRef90_UPI00164A97A0	199.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0020467_41	537013.CLOSTMETH_03464	158.0	5.25487e-43	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0020467_41	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0020467_41	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0020467_41	PF01183,PF05194,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020467_43	290402.Cbei_3386	60.5	0.000000118	N/A	N/A
PHROG	UHGV-0020467_44	phrog_13589	205.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0020467_44	411460.RUMTOR_01324	237.0	0	N/A	N/A
PHROG	UHGV-0020467_45	phrog_31538	56.2	6.7e-16	N/A	unknown function
PHROG	UHGV-0020467_46	phrog_15594	83.4	1.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0020467_46	1118055.CAGU01000013_gene763	65.9	0.00000000000115	N/A	N/A
structural_annotation	UHGV-0020467_46	PF16640,TIGR04488	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020467_47	665956.HMPREF1032_03918	118.0	1.68e-27	prophage protein Bartonella henselae str. Houston-1 gi 49237922 emb CAF27125.1	N/A
PHROG	UHGV-0020467_48	phrog_13046	46.7	0.0000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0020467_48	693746.OBV_23880	102.0	1.59e-24	N/A	N/A
structural_annotation	UHGV-0020467_48	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_49	phrog_156	233.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0020467_49	693746.OBV_23930	463.0	0	N/A	N/A
structural_annotation	UHGV-0020467_49	PF12236,MF_04120,TIGR01542,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_50	phrog_371	143.4	1.19951e-42	major head protein	head and packaging
UniRef90	UHGV-0020467_50	UniRef90_A0A1Y4TDW7	467.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0020467_50	1226322.HMPREF1545_03848	291.0	0	N/A	N/A
Pfam	UHGV-0020467_50	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0020467_50	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_51	phrog_24113	55.7	6.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0020467_51	1226322.HMPREF1545_03847	49.7	0.00000909	N/A	N/A
structural_annotation	UHGV-0020467_51	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_52	phrog_35275	60.9	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0020467_52	1226322.HMPREF1545_03846	70.9	0.0000000000282	N/A	N/A
PHROG	UHGV-0020467_54	phrog_3287	177.3	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0020467_54	665956.HMPREF1032_03917	668.0	0	N/A	N/A
structural_annotation	UHGV-0020467_54	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-0020467_55	K21523	47.0	0.00000000000011	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0020467_55	phrog_2	101.0	1.7e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0020467_55	UniRef90_UPI001F401ABC	654.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0020467_55	316274.Haur_1384	144.0	3.75e-35	N/A	N/A
Pfam	UHGV-0020467_55	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0020467_55	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0020467_55	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020467_57	PF03869	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_60	phrog_17101	43.8	0.0000000000026	N/A	unknown function
UniRef90	UHGV-0020467_62	UniRef90_W1I3U4	139.0	2.34003e-41	Uncultured bacterium extrachromosomal DNA RGI00970	N/A
eggNOG-mapper	UHGV-0020467_65	1235798.C817_04600	65.5	0.00000000000221	N/A	N/A
structural_annotation	UHGV-0020467_65	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_66	phrog_5070	143.3	7.90332e-43	N/A	unknown function
eggNOG-mapper	UHGV-0020467_66	1094556.MCY_01120	80.1	0.0000000000000156	Homologous to orf229 gp Streptococcus thermophilus bacteriophage Sfi19 gi 9632919 ref NP_049948.1	N/A
COG	UHGV-0020467_66	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-0020467_66	MF_01691,NF040481	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_67	phrog_36	72.1	9.3e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020467_67	UniRef90_A0A6P1TQZ5	53.1	0.00000342	N/A	N/A
Pfam	UHGV-0020467_67	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0020467_67	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0020467_67	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0020467_69	phrog_3136	52.7	0.0000000000000073	N/A	unknown function

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020467	Yes	44,337	55	100	1
UHGV-1793681	No	11,083	54	25	1