Viral OTU vOTU-045110

vOTU: vOTU-045110

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-045110
Number of Genomes	7
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00152 → vGENUS-00084 → vSUBGEN-11454 → vOTU-045110
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0072605
Biosample ID	SAMEA2737691
Length	40,017 bps
CheckV Completeness	100.00% (Complete)
CDS Count	74
CDS Density	88.24%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0072605_1	K06400	227.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0072605_1	phrog_95	253.2	0	integrase	integration and excision
UniRef90	UHGV-0072605_1	UniRef90_A0A1Q6KI87	871.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_1	180332.JTGN01000010_gene4488	186.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0072605_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0072605_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0072605_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0072605_1	PF00239,PF13408,PF14235,NF041201,COG1961,COG1579	N/A	N/A	N/A	N/A
KOfam	UHGV-0072605_2	K19370	40.5	0.000000000024	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-0072605_2	phrog_10292	58.2	9.5e-17	N/A	unknown function
UniRef90	UHGV-0072605_2	UniRef90_A0A1Q6KIC5	243.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_2	665956.HMPREF1032_00562	130.0	3.57e-37	TM2 domain	N/A
Pfam	UHGV-0072605_2	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0072605_2	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0072605_4	K18830	66.5	5.9e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0072605_4	phrog_8	57.3	2.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0072605_4	UniRef90_A0A3R5Z350	229.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0072605_4	642492.Clole_0718	96.7	3.09e-24	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0072605_4	retron_type_VI_hth_cluster2_1	48.8	0.00000000000015	N/A	Retron
Pfam	UHGV-0072605_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0072605_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0072605_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0072605_7	PF11127	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0072605_9	PF15513,NF007469	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_11	phrog_14970	242.1	0	N/A	unknown function
UniRef90	UHGV-0072605_11	UniRef90_UPI0011AF792D	211.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0072605_11	1235799.C818_00195	181.0	0	double-strand break repair protein	N/A
COG	UHGV-0072605_11	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0072605_11	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_12	phrog_72	53.5	0.0000000000000041	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0072605_12	UniRef90_A0A285PU94	130.0	3.16e-35	Recombinase NinB	N/A
eggNOG-mapper	UHGV-0072605_12	411490.ANACAC_00804	132.0	1.36e-36	N/A	N/A
structural_annotation	UHGV-0072605_12	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_13	phrog_7566	98.3	4.4e-29	N/A	unknown function
UniRef90	UHGV-0072605_13	UniRef90_UPI001C0181E7	184.0	0	phosphoenolpyruvate carboxykinase	N/A
KOfam	UHGV-0072605_15	K01160	42.3	0.00000000002	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0072605_15	phrog_1682	75.1	1.1e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0072605_15	UniRef90_A0A412FH46	252.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0072605_15	1235790.C805_00029	164.0	0	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
Pfam	UHGV-0072605_15	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0072605_15	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0072605_15	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_16	phrog_19658	46.8	0.00000000000032	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0072605_16	UniRef90_K2GLN4	104.0	1.62e-23	Primosome subunit	N/A
eggNOG-mapper	UHGV-0072605_16	1071400.LBUCD034_0926	114.0	2.08e-27	DnaD domain protein	N/A
COG	UHGV-0072605_16	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0072605_16	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0072605_17	K02315	145.2	5.49309e-43	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0072605_17	phrog_50	141.0	9.99967e-42	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0072605_17	UniRef90_A0A1Q6KIH9	416.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_17	742733.HMPREF9469_01844	230.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0072605_17	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0072605_17	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0072605_17	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_21	phrog_10455	82.6	3.9e-24	N/A	unknown function
UniRef90	UHGV-0072605_21	UniRef90_R7N9Z9	136.0	8.09e-40	Conserved domain protein	N/A
PHROG	UHGV-0072605_24	phrog_874	156.8	0	N/A	unknown function
UniRef90	UHGV-0072605_24	UniRef90_A0A6N7W7Q7	189.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_24	411468.CLOSCI_00298	191.0	0	N/A	N/A
structural_annotation	UHGV-0072605_24	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_26	phrog_424	81.8	9.9e-24	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0072605_26	UniRef90_A0A6L6XK67	444.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0072605_26	1410650.JHWL01000037_gene617	251.0	0	sulfate reduction	N/A
COG	UHGV-0072605_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0072605_26	PF01507,MF_00063,NF002537,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0072605_28	536232.CLM_1636	126.0	5.17e-34	N/A	N/A
structural_annotation	UHGV-0072605_28	PF17457	N/A	N/A	N/A	N/A
UniRef90	UHGV-0072605_29	UniRef90_UPI00129E4C6A	59.7	0.00000000938	N/A	N/A
UniRef90	UHGV-0072605_38	UniRef90_A0A412KFA7	143.0	2.49431e-43	ABC transporter ATP-binding protein	N/A
KOfam	UHGV-0072605_40	K07727	43.9	0.0000000000057	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0072605_40	UniRef90_A0A3R5WW48	129.0	4.76e-38	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0072605_40	1235799.C818_04243	108.0	2.73e-30	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0072605_40	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0072605_40	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_43	phrog_33130	94.3	6.5e-28	N/A	unknown function
UniRef90	UHGV-0072605_43	UniRef90_A0A3B9CD52	127.0	1.2e-36	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0072605_43	PF10922	N/A	N/A	N/A	N/A
KOfam	UHGV-0072605_44	K06909	216.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0072605_44	phrog_5653	99.6	1.8e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0072605_44	UniRef90_A0A3R5WSV0	1091.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_44	33035.JPJF01000106_gene3136	312.0	0	Terminase small subunit	N/A
Pfam	UHGV-0072605_44	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0072605_44	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0072605_44	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0072605_44	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_45	phrog_533	245.7	0	portal protein	head and packaging
UniRef90	UHGV-0072605_45	UniRef90_A0A3R5WTT1	924.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0072605_45	476272.RUMHYD_01758	330.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0072605_45	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_47	phrog_556	84.8	8e-25	minor head protein	head and packaging
UniRef90	UHGV-0072605_47	UniRef90_UPI000E4A8F9F	102.0	1.05e-25	minor capsid protein	N/A
eggNOG-mapper	UHGV-0072605_47	1449050.JNLE01000003_gene3886	52.4	0.000000686	N/A	N/A
Pfam	UHGV-0072605_47	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0072605_47	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_48	phrog_581	208.2	0	minor head protein	head and packaging
UniRef90	UHGV-0072605_48	UniRef90_A0A6L5YIK0	567.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0072605_48	645991.Sgly_0338	156.0	3.9e-39	N/A	N/A
Pfam	UHGV-0072605_48	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0072605_48	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0072605_48	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0072605_49	1235790.C805_00057	60.5	0.0000000000231	N/A	N/A
structural_annotation	UHGV-0072605_49	PF04545,MF_00674,NF001067,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0072605_50	658655.HMPREF0988_00919	84.7	8.45e-19	N/A	N/A
eggNOG-mapper	UHGV-0072605_51	658655.HMPREF0988_00918	87.8	4.51e-22	N/A	N/A
PHROG	UHGV-0072605_52	phrog_16490	216.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0072605_52	397290.C810_01328	201.0	0	N/A	N/A
PHROG	UHGV-0072605_53	phrog_20016	212.7	0	N/A	unknown function
UniRef90	UHGV-0072605_53	UniRef90_A0A285PT46	158.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0072605_53	397290.C810_05214	219.0	0	N/A	N/A
structural_annotation	UHGV-0072605_53	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0072605_54	658655.HMPREF0988_00915	120.0	4.72e-31	N/A	N/A
PHROG	UHGV-0072605_55	phrog_1233	42.5	0.000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0072605_55	397290.C810_01336	120.0	5.19e-34	N/A	N/A
structural_annotation	UHGV-0072605_55	PF20352,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_57	phrog_194	58.8	1.2e-16	head scaffolding protein	head and packaging
UniRef90	UHGV-0072605_57	UniRef90_UPI000E538A87	110.0	7.8e-27	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0072605_57	476272.RUMHYD_01775	104.0	5.06e-25	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0072605_57	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0072605_58	phrog_544	130.4	1.4e-38	major head protein	head and packaging
UniRef90	UHGV-0072605_58	UniRef90_A0A395X7A1	362.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_58	476272.RUMHYD_01776	323.0	0	N/A	N/A
structural_annotation	UHGV-0072605_58	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_59	phrog_541	91.1	1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0072605_59	476272.RUMHYD_01778	86.3	3.16e-19	N/A	N/A
PHROG	UHGV-0072605_60	phrog_3366	91.6	7.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0072605_60	1235790.C805_00078	158.0	0	N/A	N/A
structural_annotation	UHGV-0072605_60	PF20536,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0072605_61	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_62	phrog_3099	83.1	3.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0072605_62	552396.HMPREF0863_00272	55.5	0.00000035	N/A	N/A
structural_annotation	UHGV-0072605_62	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_63	phrog_11299	42.2	0.000000000012	N/A	unknown function
structural_annotation	UHGV-0072605_63	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_64	phrog_706	121.8	5.1e-36	N/A	unknown function
UniRef90	UHGV-0072605_64	UniRef90_C7GBZ7	182.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0072605_64	645991.Sgly_0348	72.8	0.00000000000044	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0072605_64	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0072605_64	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_65	phrog_1535	310.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0072605_65	UniRef90_A0A174WQ97	361.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0072605_65	1235790.C805_00087	459.0	0	tape measure	N/A
COG	UHGV-0072605_65	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0072605_65	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_66	phrog_1194	49.0	0.000000000000097	N/A	unknown function
eggNOG-mapper	UHGV-0072605_66	1120746.CCNL01000014_gene2106	104.0	4.95e-27	N/A	N/A
structural_annotation	UHGV-0072605_66	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_67	phrog_13879	279.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0072605_67	1120746.CCNL01000014_gene2107	355.0	0	N/A	N/A
structural_annotation	UHGV-0072605_67	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0072605_69	phrog_18725	84.7	5.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0072605_69	1226322.HMPREF1545_00062	88.2	6.23e-20	N/A	N/A
PHROG	UHGV-0072605_72	phrog_4105	91.2	8.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0072605_72	411459.RUMOBE_00911	155.0	0	N/A	N/A
PHROG	UHGV-0072605_73	phrog_1129	94.1	7.7e-28	holin	lysis
UniRef90	UHGV-0072605_73	UniRef90_A0A412KF76	171.0	0	Holin	N/A
eggNOG-mapper	UHGV-0072605_73	1256908.HMPREF0373_00463	165.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0072605_73	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0072605_73	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0072605_74	K01448	112.8	4e-33	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0072605_74	phrog_435	187.3	0	endolysin	lysis
UniRef90	UHGV-0072605_74	UniRef90_A0A1Q6KI91	469.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0072605_74	1232447.BAHW02000005_gene156	175.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0072605_74	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0072605_74	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0072605_74	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0072605_74	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0072605	Yes	40,017	38	100	1
UHGV-1364632	No	40,017	38	100	1
UHGV-0097830	No	44,135	38	100	1
UHGV-1459226	No	22,741	38	54	1
UHGV-2042089	No	21,210	39	50	1
UHGV-1695737	No	18,946	39	45	1
UHGV-0188328	No	18,872	39	45	1