Viral OTU vOTU-046613

vOTU: vOTU-046613

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-046613
Number of Genomes	33
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-03728 → vGENUS-05740 → vSUBGEN-03742 → vOTU-046613
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0177345
Biosample ID	SAMN09781791
Length	32,463 bps
CheckV Completeness	100.00% (Complete)
CDS Count	45
CDS Density	94.65%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0177345_1	phrog_199	80.9	1.4e-23	holin	lysis
UniRef90	UHGV-0177345_1	UniRef90_UPI00189A1D4C	178.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0177345_1	1121334.KB911073_gene1876	173.0	0	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0177345_1	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0177345_1	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0177345_1	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0177345_1	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0177345_2	K07273	126.7	2.6e-37	acm; lysozyme	N/A
PHROG	UHGV-0177345_2	phrog_291	113.2	3.2e-33	endolysin	lysis
UniRef90	UHGV-0177345_2	UniRef90_R6BDP1	153.0	1.88993e-41	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_2	1304880.JAGB01000002_gene2202	160.0	1.4013e-44	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-0177345_2	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0177345_2	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0177345_2	PF01183,MF_02227,NF002576,COG3757	N/A	N/A	N/A	N/A
Pfam	UHGV-0177345_3	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
KOfam	UHGV-0177345_5	K00986	73.7	2.6e-21	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0177345_5	phrog_1423	170.5	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177345_5	UniRef90_UPI001D089E29	282.0	0	reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_5	33035.JPJF01000043_gene1000	258.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
Pfam	UHGV-0177345_5	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0177345_5	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0177345_5	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_6	phrog_17147	367.8	0	N/A	unknown function
UniRef90	UHGV-0177345_6	UniRef90_A0A0M4N1P7	216.0	0	Unassigned protein	N/A
eggNOG-mapper	UHGV-0177345_6	478749.BRYFOR_08557	160.0	5.45e-38	N/A	N/A
structural_annotation	UHGV-0177345_6	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_8	phrog_1067	335.1	0	minor head protein	head and packaging
UniRef90	UHGV-0177345_8	UniRef90_A0A3D5L0J3	390.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_8	1160721.RBI_I01574	310.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0177345_8	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0177345_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0177345_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0177345_8	PF14594,PF00629,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_9	phrog_33	68.9	1.3e-19	distal tail protein Dit	tail
UniRef90	UHGV-0177345_9	UniRef90_A0A0X8V9V4	77.0	0.000000000000203	Phage tail protein	N/A
eggNOG-mapper	UHGV-0177345_9	585506.HMPREF0877_0163	90.1	8.66e-19	tail component	N/A
COG	UHGV-0177345_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0177345_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_10	phrog_991	260.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0177345_10	UniRef90_UPI0006C051F8	386.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0177345_10	1414720.CBYM010000040_gene1655	329.0	0	tail tape measure protein	N/A
Pfam	UHGV-0177345_10	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0177345_10	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0177345_10	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0177345_10	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_12	phrog_1021	44.7	0.0000000000021	N/A	unknown function
PHROG	UHGV-0177345_13	phrog_885	158.8	0	major tail protein	tail
UniRef90	UHGV-0177345_13	UniRef90_UPI000BE41A82	161.0	1.4013e-45	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_13	457396.CSBG_01054	162.0	0	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0177345_13	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0177345_13	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177345_14	PF12691	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177345_15	UniRef90_UPI001A9B6FBF	130.0	1.45e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0177345_15	457396.CSBG_01052	105.0	1.79e-26	N/A	N/A
structural_annotation	UHGV-0177345_15	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_16	phrog_1951	77.0	2.1e-22	head-tail adaptor	connector
UniRef90	UHGV-0177345_16	UniRef90_UPI00164E320F	69.7	0.000000000000273	phage head closure protein	N/A
eggNOG-mapper	UHGV-0177345_16	202752.JL53_03765	70.5	0.0000000000000228	head-tail adaptor	N/A
COG	UHGV-0177345_16	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0177345_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_17	phrog_5223	79.4	2.7e-23	neck protein	connector
eggNOG-mapper	UHGV-0177345_17	1203606.HMPREF1526_00977	64.3	0.00000000000322	N/A	N/A
PHROG	UHGV-0177345_18	phrog_10	115.5	6.5e-34	major head protein	head and packaging
UniRef90	UHGV-0177345_18	UniRef90_UPI00073E62C9	294.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0177345_18	626523.GCWU000342_01025	263.0	0	Phage capsid family	N/A
Pfam	UHGV-0177345_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0177345_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0177345_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0177345_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0177345_19	K06904	123.2	3e-36	N/A	N/A
PHROG	UHGV-0177345_19	phrog_80	135.6	5.19999e-40	head maturation protease	head and packaging
UniRef90	UHGV-0177345_19	UniRef90_A0A1V5IPN6	197.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0177345_19	1203606.HMPREF1526_01338	186.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0177345_19	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0177345_19	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0177345_19	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0177345_19	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_20	phrog_12	113.8	1.4e-33	portal protein	head and packaging
UniRef90	UHGV-0177345_20	UniRef90_A0A316PZH6	478.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0177345_20	411470.RUMGNA_02063	417.0	0	Phage portal protein	N/A
Pfam	UHGV-0177345_20	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0177345_20	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0177345_20	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_21	phrog_9	332.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0177345_21	UniRef90_A0A4V2S9X1	706.0	0	Phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0177345_21	1203606.HMPREF1526_01335	670.0	0	Terminase	N/A
Pfam	UHGV-0177345_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0177345_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0177345_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0177345_21	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_22	phrog_1066	97.8	8.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0177345_22	1094508.Tsac_2428	110.0	1.28e-29	N/A	N/A
Pfam	UHGV-0177345_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0177345_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_23	phrog_119	63.1	4.5e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177345_23	UniRef90_A0A4V1YA37	117.0	1.03e-31	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0177345_23	411902.CLOBOL_03884	117.0	1.73e-32	HNH endonuclease	N/A
Pfam	UHGV-0177345_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0177345_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0177345_24	1507.HMPREF0262_00210	81.6	1.34e-17	N/A	N/A
structural_annotation	UHGV-0177345_24	TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0177345_25	K03660	159.2	0	OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]	N/A
UniRef90	UHGV-0177345_25	UniRef90_A0A1Y3RS13	219.0	0	ENDO3c domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_25	1123075.AUDP01000006_gene2531	160.0	8.40779e-45	8-oxoguanine DNA glycosylase	N/A
Pfam	UHGV-0177345_25	PF07934	N/A	N/A	8-oxoguanine DNA glycosylase, N-terminal domain	OGG_N
COG	UHGV-0177345_25	COG0122	N/A	N/A	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	N/A
structural_annotation	UHGV-0177345_25	PF07934,PF00730,MF_00942,TIGR00588,COG0122	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_26	phrog_37023	111.5	6.3e-33	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177345_26	UniRef90_A0A6S6XBJ8	159.0	0	Tn7_Tnp_TnsA_N domain-containing protein	N/A
Pfam	UHGV-0177345_26	PF06356	N/A	N/A	N/A	DUF1064
PHROG	UHGV-0177345_27	phrog_3584	239.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0177345_27	97139.C824_00747	174.0	0	N/A	N/A
structural_annotation	UHGV-0177345_27	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_29	phrog_3136	69.7	4.1e-20	N/A	unknown function
UniRef90	UHGV-0177345_29	UniRef90_A0A2V2FDG6	65.9	0.0000000000673	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_29	394503.Ccel_3165	56.6	0.0000000264	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0177345_29	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0177345_29	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0177345_29	PF04266,MF_00684,NF003443,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_30	phrog_17284	43.9	0.0000000000032	N/A	unknown function
UniRef90	UHGV-0177345_30	UniRef90_UPI001CF3F91D	70.9	0.0000000000000319	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0177345_30	1391647.AVSV01000003_gene1798	70.9	0.000000000000164	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0177345_30	oMTase_00023	51.5	0.000000000000026	orphan methyltransferase	RM
Pfam	UHGV-0177345_30	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0177345_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0177345_31	K00558	132.2	3.1e-39	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0177345_31	phrog_116	102.4	3e-37	DNA methyltransferase	other
UniRef90	UHGV-0177345_31	UniRef90_UPI00189F9B8A	305.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0177345_31	397290.C810_05213	215.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0177345_31	MTase_II_00174	133.4	3e-39	Type II methyltransferase	RM
Pfam	UHGV-0177345_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0177345_31	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0177345_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0177345_31	PF00145,MF_02100,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0177345_36	phrog_4581	90.0	3.5e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0177345_36	UniRef90_A0A380F7Q0	84.3	6.61e-17	Phage-associated homing endonuclease	N/A
eggNOG-mapper	UHGV-0177345_36	1141106.CAIB01000128_gene1076	74.3	0.0000000000000629	HNH nucleases	N/A
COG	UHGV-0177345_36	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0177345_42	UniRef90_A0A417ACE5	94.0	6.89e-24	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0177345_42	PF20432	N/A	N/A	Antitoxin Xre-like helix-turn-helix domain	Xre-like-HTH
structural_annotation	UHGV-0177345_42	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0177345_43	K22300	75.1	1.5e-21	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0177345_43	phrog_8	69.5	7.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0177345_43	UniRef90_A0A1Y4GX41	127.0	2.04e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0177345_43	1232446.BAIE02000002_gene795	96.7	8.53e-23	N/A	N/A
Pfam	UHGV-0177345_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0177345_43	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0177345_43	PF01381,MF_02017,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0177345_44	K02342	178.9	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0177345_44	phrog_192	148.6	3.22299e-44	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177345_44	UniRef90_A0A3D0EC75	280.0	0	Exonuclease	N/A
eggNOG-mapper	UHGV-0177345_44	537013.CLOSTMETH_02498	248.0	0	EXOIII	N/A
PADLOC	UHGV-0177345_44	cd06127	121.5	1.1e-35	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0177345_44	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0177345_44	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-0177345_44	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0177345_44	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0177345_44	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
KOfam	UHGV-0177345_45	K06400	298.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0177345_45	phrog_95	293.4	0	integrase	integration and excision
UniRef90	UHGV-0177345_45	UniRef90_UPI000B3A7453	452.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0177345_45	1235835.C814_00825	402.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0177345_45	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0177345_45	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0177345_45	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0177345_45	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0177345_45	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0177345	Yes	32,463	56	100	1
UHGV-0023616	No	37,534	55	100	1
UHGV-0015134	No	34,269	56	100	1
UHGV-0165661	No	33,625	55	100	1
UHGV-0011154	No	32,730	57	99	1
UHGV-0178864	No	32,009	57	99	1
UHGV-0170434	No	32,083	56	98	1
UHGV-0013715	No	32,060	57	98	1
UHGV-0012502	No	32,523	57	97	1
UHGV-0011005	No	31,521	57	96	1
UHGV-0017670	No	31,325	57	95	1
UHGV-0018273	No	31,325	57	95	1
UHGV-0006071	No	32,632	57	95	1
UHGV-0188203	No	31,510	57	94	1
UHGV-0092059	No	31,789	56	91	1
UHGV-0029684	No	31,749	57	89	1
UHGV-0157595	No	45,002	54	83	1
UHGV-0078105	No	26,417	56	80	1
UHGV-0021467	No	26,217	56	80	1
UHGV-0016836	No	25,386	57	75	1
UHGV-2065689	No	25,532	57	75	1
UHGV-1465331	No	23,812	56	72	1
UHGV-0171626	No	24,302	56	71	1
UHGV-2060949	No	20,287	56	57	1
UHGV-2060506	No	19,876	56	56	1
UHGV-1441675	No	17,566	56	53	1
UHGV-1740673	No	15,351	55	46	1
UHGV-1804108	No	14,892	55	46	1
UHGV-1646062	No	14,505	55	45	1
UHGV-1584959	No	11,727	56	37	1
UHGV-1585379	No	11,658	55	34	1
UHGV-2056514	No	11,089	55	34	1
UHGV-2073494	No	10,583	57	26	1