Viral OTU vOTU-048235

vOTU: vOTU-048235

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-048235
Number of Genomes	3
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00627 → vSUBGEN-04460 → vOTU-048235
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0207534
Biosample ID	SAMN10290217
Length	42,390 bps
CheckV Completeness	100.00% (Complete)
CDS Count	72
CDS Density	90.31%
tRNA Count	4
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0207534_1	phrog_64	134.6	3.09999e-40	portal protein	head and packaging
UniRef90	UHGV-0207534_1	UniRef90_A0A6N7TNT3	647.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0207534_1	673376.F2VHW1_9CAUD	167.0	7.28675e-44	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0207534_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0207534_1	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0207534_2	K06909	138.2	7.80005e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0207534_2	phrog_10250	178.3	0	N/A	unknown function
UniRef90	UHGV-0207534_2	UniRef90_A0A844D8I4	785.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0207534_2	903814.ELI_3215	488.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0207534_2	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0207534_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0207534_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0207534_2	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_3	phrog_606	92.1	5.4e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0207534_3	UniRef90_UPI001C02EFD1	327.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0207534_3	397290.C810_05185	143.0	6.51996e-41	DNA-packaging protein gp3	N/A
Pfam	UHGV-0207534_3	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0207534_3	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_4	phrog_36	56.5	5e-16	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0207534_4	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_5	phrog_9298	318.3	0	radical SAM domain protein	other
UniRef90	UHGV-0207534_5	UniRef90_A0A6L5TFB3	595.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0207534_5	552396.HMPREF0863_02707	332.0	0	radical SAM domain protein	N/A
COG	UHGV-0207534_5	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0207534_5	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
KOfam	UHGV-0207534_6	K01160	59.1	1.4e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0207534_6	phrog_34	62.0	1.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207534_6	UniRef90_A0A6N7TND6	219.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0207534_6	875454.BAEW01000002_gene491	132.0	2.43e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0207534_6	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0207534_6	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0207534_6	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_9	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_10	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0207534_11	K02086	68.2	1.2e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-0207534_11	phrog_186	76.9	3.1e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207534_11	UniRef90_A0A6N7TLH4	258.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0207534_11	877411.JMMA01000002_gene2292	68.6	0.0000000000915	N/A	N/A
Pfam	UHGV-0207534_11	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0207534_11	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0207534_11	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0207534_11	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0207534_12	K03111	44.6	0.0000000000032	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0207534_12	phrog_44	42.2	0.000000000017	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207534_12	UniRef90_D4K451	150.0	8.40779e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0207534_12	718252.FP2_06770	150.0	1.4013e-45	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0207534_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0207534_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
KOfam	UHGV-0207534_13	K03111	74.0	3.5e-21	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0207534_13	phrog_44	77.9	2.1e-22	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207534_13	UniRef90_UPI00122F7988	87.4	1.13e-20	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0207534_13	718252.FP2_06770	116.0	2.02e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0207534_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0207534_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0207534_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0207534_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_14	phrog_561	113.3	2.1e-33	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207534_14	UniRef90_UPI0011C8A287	150.0	7.78001e-42	recombinase RecT	N/A
eggNOG-mapper	UHGV-0207534_14	33035.JPJF01000071_gene4462	145.0	8.77998e-41	N/A	N/A
structural_annotation	UHGV-0207534_14	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_19	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_20	phrog_4433	156.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0207534_20	394503.Ccel_3068	107.0	7.43e-26	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0207534_20	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0207534_20	PF12120,NF007410	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207534_23	1121865.OMW_01950	71.6	0.00000000000000186	N/A	N/A
structural_annotation	UHGV-0207534_23	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_24	phrog_2593	92.8	4.8e-27	anti-repressor	transcription regulation
UniRef90	UHGV-0207534_24	UniRef90_A0A1Y4RA31	180.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0207534_24	476272.RUMHYD_03308	162.0	0	BRO family, N-terminal domain	N/A
COG	UHGV-0207534_24	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0207534_24	PF02498,COG3617	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207534_25	760568.Desku_0919	97.4	2.64e-22	N/A	N/A
structural_annotation	UHGV-0207534_25	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_28	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
KOfam	UHGV-0207534_29	K22300	49.5	0.00000000000009	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0207534_29	phrog_2967	48.9	0.00000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0207534_29	UniRef90_A0A844DFR0	169.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0207534_29	748224.HMPREF9436_01444	140.0	5.38995e-41	N/A	N/A
Pfam	UHGV-0207534_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207534_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207534_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207534_31	1280696.ATVY01000034_gene3237	135.0	6.31e-33	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	N/A
eggNOG-mapper	UHGV-0207534_32	321955.AAGP01000017_gene2211	64.7	0.000000000159	N/A	N/A
structural_annotation	UHGV-0207534_32	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207534_35	UniRef90_A0A6N7TLT0	204.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0207534_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0207534_35	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0207534_36	K14059	139.7	3.30006e-41	int; integrase	N/A
PHROG	UHGV-0207534_36	phrog_1	167.2	0	integrase	integration and excision
UniRef90	UHGV-0207534_36	UniRef90_A0A6N7TNQ4	713.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0207534_36	411471.SUBVAR_05137	264.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0207534_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0207534_36	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0207534_36	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_38	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_39	phrog_20016	208.3	0	N/A	unknown function
UniRef90	UHGV-0207534_39	UniRef90_A0A285PT46	217.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0207534_39	1226322.HMPREF1545_00077	188.0	0	N/A	N/A
structural_annotation	UHGV-0207534_39	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_40	phrog_16490	148.0	5.04467e-44	N/A	unknown function
eggNOG-mapper	UHGV-0207534_40	1408437.JNJN01000043_gene803	139.0	1.86e-37	N/A	N/A
PHROG	UHGV-0207534_41	phrog_22984	80.5	1.1e-23	N/A	unknown function
PHROG	UHGV-0207534_42	phrog_21718	126.5	1.6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0207534_42	397290.C810_05210	102.0	1.33e-25	N/A	N/A
PHROG	UHGV-0207534_43	phrog_3754	97.7	1.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0207534_43	1235790.C805_00054	114.0	2.79e-31	N/A	N/A
UniRef90	UHGV-0207534_45	UniRef90_A0A174XWS3	68.9	0.00000000000118	Bacterial regulatory proteins, luxR family	N/A
eggNOG-mapper	UHGV-0207534_45	485916.Dtox_2202	65.9	0.0000000000917	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0207534_45	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
PHROG	UHGV-0207534_46	phrog_13890	64.5	1.1e-18	N/A	unknown function
UniRef90	UHGV-0207534_46	UniRef90_UPI0008F8D321	52.4	0.000000159	N/A	N/A
eggNOG-mapper	UHGV-0207534_46	742741.HMPREF9475_00396	54.7	0.00000000693	N/A	N/A
structural_annotation	UHGV-0207534_46	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_48	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_49	phrog_15303	80.2	2.2e-23	N/A	unknown function
PHROG	UHGV-0207534_50	phrog_1863	79.0	3.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0207534_50	718252.FP2_04900	148.0	1.4013e-45	N/A	N/A
KOfam	UHGV-0207534_51	K07273	157.2	0	acm; lysozyme	N/A
PHROG	UHGV-0207534_51	phrog_291	120.8	1.2e-35	endolysin	lysis
UniRef90	UHGV-0207534_51	UniRef90_A0A564U0D3	314.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0207534_51	718252.FP2_04890	281.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0207534_51	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0207534_51	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0207534_51	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_52	phrog_35313	49.5	0.00000000000003	N/A	unknown function
UniRef90	UHGV-0207534_52	UniRef90_A0A3E0AFC2	226.0	0	Putative BNR repeat neuraminidase	N/A
eggNOG-mapper	UHGV-0207534_52	882082.SaccyDRAFT_3252	74.7	0.0000000000275	BNR repeat-containing family member	N/A
COG	UHGV-0207534_52	COG4225	N/A	N/A	Rhamnogalacturonyl hydrolase YesR	N/A
structural_annotation	UHGV-0207534_52	PF05096,MF_03141,NF035926,COG3823	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_53	phrog_3558	198.3	0	tail protein	tail
UniRef90	UHGV-0207534_53	UniRef90_A0A8B3ALT8	166.0	2.61999e-40	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0207534_53	411460.RUMTOR_00484	172.0	2.41023e-43	Prophage endopeptidase tail	N/A
Pfam	UHGV-0207534_53	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0207534_53	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0207534_53	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207534_54	UniRef90_A0A7G9WF98	97.4	7.08e-22	MtfA protein	N/A
structural_annotation	UHGV-0207534_54	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_55	phrog_9959	87.0	1.2e-25	tail length tape measure protein	tail
UniRef90	UHGV-0207534_55	UniRef90_UPI001C038824	636.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0207534_55	1492737.FEM08_12070	150.0	2.64e-35	tape measure	N/A
Pfam	UHGV-0207534_55	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0207534_55	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0207534_55	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0207534_55	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_58	phrog_885	65.6	6.2e-19	major tail protein	tail
eggNOG-mapper	UHGV-0207534_58	1111121.HMPREF1247_0789	152.0	4.06377e-44	N/A	N/A
structural_annotation	UHGV-0207534_58	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_59	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_60	phrog_17977	44.0	0.0000000000032	N/A	unknown function
UniRef90	UHGV-0207534_60	UniRef90_A0A844DHJ8	116.0	3.78e-31	Phage head closure protein	N/A
structural_annotation	UHGV-0207534_60	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_62	phrog_544	155.7	0	major head protein	head and packaging
UniRef90	UHGV-0207534_62	UniRef90_R0BKA1	456.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0207534_62	476272.RUMHYD_01776	338.0	0	N/A	N/A
structural_annotation	UHGV-0207534_62	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_63	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_64	phrog_374	240.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207534_64	UniRef90_A0A380IPI2	197.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0207534_64	1460635.JCM19038_3433	205.0	0	N/A	N/A
structural_annotation	UHGV-0207534_65	PF07342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207534_66	UniRef90_A0A3A9HXZ9	84.0	2.85e-20	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0207534_66	1235800.C819_00492	81.6	4.04e-20	N/A	N/A
structural_annotation	UHGV-0207534_66	PF01402,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_67	phrog_5	50.9	0.000000000000037	tail completion or Neck1 protein	connector
UniRef90	UHGV-0207534_67	UniRef90_A0A6N7TNP6	298.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0207534_67	1123309.AQYB01000018_gene814	96.7	1.24e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0207534_67	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0207534_67	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_69	phrog_8680	198.9	0	N/A	unknown function
UniRef90	UHGV-0207534_69	UniRef90_A0A844D688	454.0	0	N/A	N/A
eggNOG-mapper	UHGV-0207534_69	1423790.BN53_04265	183.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0207534_69	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0207534_69	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0207534_69	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0207534_71	phrog_2468	80.8	1.1e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0207534_71	UniRef90_A0A6N7TLR7	637.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0207534_71	1504822.CCNO01000013_gene286	113.0	5.27e-25	cell adhesion	N/A
Pfam	UHGV-0207534_71	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0207534_71	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207534_71	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0207534	Yes	42,390	53	100	1
UHGV-0138208	No	25,799	54	61	1
UHGV-1405200	No	25,799	54	61	1