Viral OTU vOTU-048813

vOTU: vOTU-048813

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-048813
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vSUBGEN-33319 → vOTU-048813
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0211835
Biosample ID	SAMN09781787
Length	34,599 bps
CheckV Completeness	100.00% (Complete)
CDS Count	54
CDS Density	92.66%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0211835_1	phrog_5978	163.8	0	N/A	unknown function
UniRef90	UHGV-0211835_1	UniRef90_A0A372UZA0	439.0	0	Fic family protein	N/A
eggNOG-mapper	UHGV-0211835_1	479437.Elen_3019	310.0	0	Filamentation induced by cAMP protein fic	N/A
Pfam	UHGV-0211835_1	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-0211835_1	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-0211835_1	PF07183,MF_01911,NF040876,COG3177	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_2	K14059	218.4	0	int; integrase	N/A
PHROG	UHGV-0211835_2	phrog_1	194.0	0	integrase	integration and excision
UniRef90	UHGV-0211835_2	UniRef90_UPI001958A27A	207.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0211835_2	1203606.HMPREF1526_00215	165.0	9.80909e-45	Phage integrase family	N/A
Pfam	UHGV-0211835_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0211835_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0211835_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0211835_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_3	K06400	275.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0211835_3	phrog_95	285.7	0	integrase	integration and excision
UniRef90	UHGV-0211835_3	UniRef90_A0A417HSQ2	374.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0211835_3	1356854.N007_18555	187.0	0	Recombinase	N/A
Pfam	UHGV-0211835_3	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0211835_3	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0211835_3	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0211835_3	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211835_6	UniRef90_A0A4R1QMH6	87.0	3.93e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0211835_6	445972.ANACOL_00210	101.0	1.03e-27	N/A	N/A
Pfam	UHGV-0211835_6	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-0211835_6	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_7	phrog_1129	62.2	6e-18	holin	lysis
UniRef90	UHGV-0211835_7	UniRef90_A0A8J6J3M3	102.0	1.05e-26	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0211835_7	742740.HMPREF9474_03522	100.0	1.48e-26	N/A	N/A
Pfam	UHGV-0211835_7	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0211835_7	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_8	phrog_1863	62.3	1.6e-18	N/A	unknown function
UniRef90	UHGV-0211835_8	UniRef90_UPI001F223E8B	68.6	0.000000000000232	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0211835_8	1226322.HMPREF1545_04027	68.2	0.0000000000000539	N/A	N/A
KOfam	UHGV-0211835_9	K01447	66.5	5e-19	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0211835_9	phrog_5182	170.0	0	endolysin	lysis
UniRef90	UHGV-0211835_9	UniRef90_R5AZE6	440.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-0211835_9	397288.C806_00777	196.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0211835_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0211835_9	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-0211835_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0211835_9	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
Pfam	UHGV-0211835_10	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-0211835_10	PF18998,PF20328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211835_12	742733.HMPREF9469_05009	58.5	0.00000000155	N/A	N/A
PHROG	UHGV-0211835_13	phrog_13589	206.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0211835_13	742733.HMPREF9469_05009	228.0	0	N/A	N/A
PHROG	UHGV-0211835_14	phrog_31538	58.4	1.4e-16	N/A	unknown function
PHROG	UHGV-0211835_15	phrog_15594	96.3	1.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0211835_15	1118055.CAGU01000013_gene763	57.0	0.00000000284	N/A	N/A
structural_annotation	UHGV-0211835_15	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_16	phrog_24267	106.3	2.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0211835_16	742742.HMPREF9452_00376	132.0	3.92e-37	tail collar domain protein	N/A
COG	UHGV-0211835_16	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0211835_16	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_17	phrog_38190	62.6	6.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0211835_17	762211.BSTEL_0610	75.9	0.0000000000000878	N/A	N/A
PHROG	UHGV-0211835_18	phrog_6616	58.1	1.3e-17	tail protein	tail
structural_annotation	UHGV-0211835_18	PF13550,PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211835_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_20	phrog_1535	119.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0211835_20	UniRef90_A0A810PX76	101.0	1.63e-18	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0211835_20	1235797.C816_04182	185.0	0	SLT domain	N/A
COG	UHGV-0211835_20	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_21	phrog_706	108.1	7.1e-32	N/A	unknown function
UniRef90	UHGV-0211835_21	UniRef90_UPI00164D7633	176.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0211835_21	693746.OBV_18170	169.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0211835_21	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0211835_21	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_22	phrog_11299	99.5	3.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0211835_22	1449050.JNLE01000003_gene3883	66.2	0.0000000000104	N/A	N/A
structural_annotation	UHGV-0211835_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_23	phrog_3099	86.9	2.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-0211835_23	693746.OBV_18150	227.0	0	N/A	N/A
structural_annotation	UHGV-0211835_23	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_24	phrog_3266	64.7	1.2e-18	tail completion	connector
eggNOG-mapper	UHGV-0211835_24	476272.RUMHYD_01781	119.0	5.44e-32	N/A	N/A
structural_annotation	UHGV-0211835_24	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_25	phrog_556	59.5	2.9e-17	minor head protein	head and packaging
UniRef90	UHGV-0211835_25	UniRef90_A0A1H7MNM8	145.0	9.98005e-42	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0211835_25	33035.JPJF01000106_gene3128	92.8	7.94e-22	N/A	N/A
Pfam	UHGV-0211835_25	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0211835_25	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_26	phrog_3366	52.9	0.0000000000000066	N/A	unknown function
structural_annotation	UHGV-0211835_26	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_27	phrog_541	67.3	1.9e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0211835_27	33035.JPJF01000106_gene3131	76.3	0.00000000000000192	N/A	N/A
PHROG	UHGV-0211835_28	phrog_267	54.9	0.0000000000000012	major head protein	head and packaging
eggNOG-mapper	UHGV-0211835_28	33035.JPJF01000030_gene2294	175.0	0	N/A	N/A
structural_annotation	UHGV-0211835_28	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_29	phrog_194	42.2	0.000000000012	head scaffolding protein	head and packaging
UniRef90	UHGV-0211835_29	UniRef90_UPI001C0EBA51	126.0	6.74e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0211835_29	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-0211835_29	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0211835_29	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_31	phrog_581	245.6	0	minor head protein	head and packaging
UniRef90	UHGV-0211835_31	UniRef90_A0A3D4T830	349.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0211835_31	476272.RUMHYD_01761	224.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0211835_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0211835_31	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0211835_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211835_31	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_32	phrog_533	213.6	0	portal protein	head and packaging
UniRef90	UHGV-0211835_32	UniRef90_A0A173TY48	345.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0211835_32	33035.JPJF01000106_gene3135	324.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0211835_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_33	K06909	395.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0211835_33	phrog_5653	146.5	1.49939e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0211835_33	UniRef90_A0A416S378	635.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0211835_33	33035.JPJF01000106_gene3136	597.0	0	Terminase small subunit	N/A
Pfam	UHGV-0211835_33	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0211835_33	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0211835_33	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0211835_33	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0211835_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0211835_33	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211835_34	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_35	phrog_36	60.5	3.2e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0211835_35	428125.CLOLEP_01806	105.0	6.6e-27	N/A	N/A
Pfam	UHGV-0211835_35	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0211835_35	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_36	phrog_5781	67.7	1.3e-19	N/A	unknown function
UniRef90	UHGV-0211835_36	UniRef90_A0A810Q4L2	109.0	3.68e-28	N/A	N/A
eggNOG-mapper	UHGV-0211835_36	1048834.TC41_1868	57.4	0.0000000142	N/A	N/A
Pfam	UHGV-0211835_36	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0211835_36	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_37	phrog_15609	371.9	0	N/A	unknown function
UniRef90	UHGV-0211835_37	UniRef90_A0A419G213	120.0	8.93e-28	N/A	N/A
eggNOG-mapper	UHGV-0211835_37	1378168.N510_01841	122.0	9.06e-29	N/A	N/A
Pfam	UHGV-0211835_37	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0211835_37	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0211835_37	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_38	phrog_8470	432.1	0	N/A	unknown function
UniRef90	UHGV-0211835_38	UniRef90_UPI001C1063FF	272.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0211835_38	1378168.N510_01842	226.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0211835_38	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0211835_38	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_39	phrog_38338	72.0	8.7e-21	N/A	unknown function
UniRef90	UHGV-0211835_39	UniRef90_UPI00137B3A8C	77.8	0.00000000000000121	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0211835_39	693746.OBV_25410	96.7	2.53e-24	N/A	N/A
KOfam	UHGV-0211835_40	K03700	84.6	1.2e-24	recU; recombination protein U	N/A
PHROG	UHGV-0211835_40	phrog_843	126.1	1.4e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211835_40	UniRef90_A0A1H0W5Y9	166.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0211835_40	537013.CLOSTMETH_01720	153.0	2.8026e-44	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0211835_40	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0211835_40	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0211835_40	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_41	phrog_3584	129.6	2.2e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0211835_41	411470.RUMGNA_02047	132.0	4.69e-34	N/A	N/A
structural_annotation	UHGV-0211835_41	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_44	K06284	125.0	3.4e-37	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0211835_44	phrog_4681	105.8	1.3e-31	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0211835_44	UniRef90_UPI000374C2E3	116.0	3.51e-32	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0211835_44	268407.PWYN_12320	112.0	1.39e-31	AbrB family transcriptional regulator	N/A
Pfam	UHGV-0211835_44	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0211835_44	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0211835_44	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0211835_44	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0211835_46	phrog_5663	80.8	4.6e-26	N/A	unknown function
UniRef90	UHGV-0211835_46	UniRef90_UPI001EDDD6D5	62.0	0.000000021	N/A	N/A
eggNOG-mapper	UHGV-0211835_46	390235.PputW619_1358	55.1	0.000000922	N/A	N/A
Pfam	UHGV-0211835_46	PF10386	N/A	N/A	N/A	DUF2441
UniRef90	UHGV-0211835_48	UniRef90_A0A357TPS2	73.6	0.00000000000000147	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0211835_48	1347392.CCEZ01000005_gene1206	51.2	0.000000124	N/A	N/A
structural_annotation	UHGV-0211835_48	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_50	K22300	56.8	5e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0211835_50	phrog_4	53.1	0.0000000000000073	transcriptional repressor	transcription regulation
UniRef90	UHGV-0211835_50	UniRef90_K1UM29	185.0	0	Helix-turn-helix domain protein (Fragment)	N/A
eggNOG-mapper	UHGV-0211835_50	903814.ELI_1263	135.0	2.01e-39	Helix-turn-helix domain	N/A
Pfam	UHGV-0211835_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211835_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0211835_50	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_52	K07729	58.1	1.9e-16	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0211835_52	UniRef90_R5AVU4	90.9	7.96e-23	CI-like repressor	N/A
eggNOG-mapper	UHGV-0211835_52	1120971.AUCA01000073_gene2914	58.5	0.0000000000964	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0211835_52	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0211835_52	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0211835_52	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0211835_53	K07448	132.8	2.5e-39	mrr; restriction system protein	N/A
PHROG	UHGV-0211835_53	phrog_19856	49.8	0.000000000000026	N/A	unknown function
UniRef90	UHGV-0211835_53	UniRef90_UPI001294DFE1	106.0	2.45e-23	restriction endonuclease	N/A
eggNOG-mapper	UHGV-0211835_53	1235790.C805_00010	149.0	6.59003e-41	Restriction endonuclease	N/A
PADLOC	UHGV-0211835_53	ZorD1_00005	76.1	3.5e-22	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0211835_53	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0211835_53	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-0211835_53	PF04471,MF_00722,NF040854,COG1787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211835_54	PF21227	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0211835	Yes	34,599	56	100	1
UHGV-0171918	No	34,780	56	100	1