Viral OTU vOTU-051058

vOTU: vOTU-051058

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-051058
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-06637 → vGENUS-17039 → vSUBGEN-31316 → vOTU-051058
Host Lineage	Bacteria → Proteobacteria → Alphaproteobacteria → RF32 → CAG-977 → UBA2903 → UBA2903 sp900768875
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0360257
Biosample ID	SAMN10342682
Length	39,891 bps
CheckV Completeness	100.00% (Complete)
CDS Count	62
CDS Density	88.70%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0360257_1	phrog_64	215.6	0	portal protein	head and packaging
UniRef90	UHGV-0360257_1	UniRef90_UPI001C02F349	471.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0360257_1	1121866.AUGK01000003_gene1429	365.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0360257_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0360257_1	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_3	phrog_544	132.5	2.5e-39	major head protein	head and packaging
UniRef90	UHGV-0360257_3	UniRef90_A0A1C6B5R0	574.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_3	1232453.BAIF02000011_gene3359	361.0	0	N/A	N/A
Pfam	UHGV-0360257_3	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0360257_3	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360257_4	UniRef90_D7GNV9	87.0	3.95e-20	Phage QLRG family, putative DNA packaging	N/A
eggNOG-mapper	UHGV-0360257_4	1298920.KI911353_gene2658	52.4	0.00000025	N/A	N/A
Pfam	UHGV-0360257_4	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0360257_4	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360257_5	1121866.AUGK01000003_gene1432	72.8	0.00000000000001	N/A	N/A
eggNOG-mapper	UHGV-0360257_6	1298920.KI911353_gene2654	62.0	0.0000000011	N/A	N/A
structural_annotation	UHGV-0360257_7	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360257_8	1121333.JMLH01000047_gene1013	162.0	0	N/A	N/A
structural_annotation	UHGV-0360257_8	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360257_9	UniRef90_A0A843HLA7	115.0	3.25e-31	N/A	N/A
Pfam	UHGV-0360257_9	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0360257_9	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360257_10	469596.HMPREF9488_01312	49.7	0.00000272	N/A	N/A
PHROG	UHGV-0360257_11	phrog_1535	161.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0360257_11	1121866.AUGK01000003_gene1437	290.0	0	phage tail tape measure protein	N/A
COG	UHGV-0360257_11	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0360257_12	phrog_1194	96.1	2.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0360257_12	1121866.AUGK01000003_gene1438	93.6	5.44e-23	N/A	N/A
Pfam	UHGV-0360257_12	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0360257_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_13	phrog_6616	313.4	0	tail protein	tail
eggNOG-mapper	UHGV-0360257_13	445971.ANASTE_00088	157.0	1.96e-38	N/A	N/A
structural_annotation	UHGV-0360257_13	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_14	phrog_372	279.0	0	tail protein	tail
UniRef90	UHGV-0360257_14	UniRef90_A0A412AYA6	339.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_14	1445810.A0A0A0PIV5_9CAUD	77.4	0.0000000000125	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0360257_14	PF00041	N/A	N/A	Fibronectin type III domain	fn3
Pfam	UHGV-0360257_14	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0360257_14	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360257_15	1235797.C816_04174	162.0	0	N/A	N/A
Pfam	UHGV-0360257_15	PF11192	N/A	N/A	N/A	DUF2977
Pfam	UHGV-0360257_15	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0360257_16	phrog_937	73.4	2.9e-21	hemolysin	other
eggNOG-mapper	UHGV-0360257_16	411459.RUMOBE_01081	115.0	5.95e-32	N/A	N/A
PHROG	UHGV-0360257_17	phrog_1129	64.0	1.8e-18	holin	lysis
UniRef90	UHGV-0360257_17	UniRef90_A0A810PUU2	125.0	9.35e-36	Holin	N/A
eggNOG-mapper	UHGV-0360257_17	702450.CUW_0551	97.1	2.55e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0360257_17	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0360257_17	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0360257_18	K22409	88.4	8.7e-26	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0360257_18	phrog_435	105.3	7.5e-31	endolysin	lysis
UniRef90	UHGV-0360257_18	UniRef90_A0A413QH71	211.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_18	1540257.JQMW01000004_gene402	134.0	1.67e-35	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0360257_18	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0360257_18	PF01476	N/A	N/A	LysM domain	LysM
Pfam	UHGV-0360257_18	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0360257_18	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0360257_18	PF01520,PF08230,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_19	phrog_5059	245.8	0	N/A	unknown function
UniRef90	UHGV-0360257_19	UniRef90_A0A417RL99	371.0	0	N/A	N/A
eggNOG-mapper	UHGV-0360257_19	632292.Calhy_0845	233.0	0	N/A	N/A
Pfam	UHGV-0360257_19	PF08861	N/A	N/A	N/A	DUF1828
Pfam	UHGV-0360257_19	PF08862	N/A	N/A	N/A	DUF1829
structural_annotation	UHGV-0360257_19	PF08862,PF08861,MF_00722,COG3372	N/A	N/A	N/A	N/A
KOfam	UHGV-0360257_21	K14059	88.6	1e-25	int; integrase	N/A
PHROG	UHGV-0360257_21	phrog_1	124.7	1e-36	integrase	integration and excision
UniRef90	UHGV-0360257_21	UniRef90_UPI000F051A1D	547.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0360257_21	693746.OBV_43340	421.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0360257_21	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0360257_21	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0360257_21	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0360257_21	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_23	phrog_20886	48.1	0.00000000000013	N/A	unknown function
UniRef90	UHGV-0360257_23	UniRef90_A0A357WUS8	76.3	1.46e-16	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_23	411462.DORLON_00820	47.8	0.0000062	N/A	N/A
structural_annotation	UHGV-0360257_23	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0360257_24	K22299	48.0	0.00000000000026	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0360257_24	phrog_8	76.9	3.5e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0360257_24	UniRef90_UPI000C7BE75B	125.0	8.08e-35	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0360257_24	428125.CLOLEP_02738	84.0	2.89e-19	SMART helix-turn-helix domain protein	N/A
Pfam	UHGV-0360257_24	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0360257_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0360257_24	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360257_25	UniRef90_A0A1Y4J3I8	96.7	8.52e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0360257_25	428125.CLOLEP_02737	77.0	7.99e-18	N/A	N/A
structural_annotation	UHGV-0360257_25	TIGR03070	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360257_28	UniRef90_UPI000F0633F9	89.0	1e-21	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0360257_28	693746.OBV_43260	81.6	1.36e-19	N/A	N/A
PHROG	UHGV-0360257_29	phrog_355	60.8	1.8e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360257_29	UniRef90_A0A810Q4L2	90.5	8.84e-21	N/A	N/A
eggNOG-mapper	UHGV-0360257_29	573061.Clocel_3558	77.0	3.52e-16	N/A	N/A
Pfam	UHGV-0360257_29	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0360257_29	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
PHROG	UHGV-0360257_31	phrog_801	72.4	8.3e-21	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0360257_31	UniRef90_D4LDT9	93.2	1.03e-22	N/A	N/A
eggNOG-mapper	UHGV-0360257_31	278963.ATWD01000001_gene4484	68.2	0.000000000000123	N/A	N/A
Pfam	UHGV-0360257_31	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0360257_31	PF18909	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360257_32	UniRef90_UPI001C3A10B1	64.3	0.0000000000363	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_32	1226322.HMPREF1545_00023	69.7	0.0000000000000605	N/A	N/A
eggNOG-mapper	UHGV-0360257_34	552398.HMPREF0866_03131	58.2	0.000000000109	N/A	N/A
PHROG	UHGV-0360257_35	phrog_2245	82.3	6.2e-24	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0360257_35	UniRef90_A0A4U9RLZ8	79.3	1.68e-17	N/A	N/A
eggNOG-mapper	UHGV-0360257_35	428125.CLOLEP_01814	112.0	8.52e-31	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-0360257_35	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360257_36	UniRef90_UPI001C3A10B1	76.6	0.00000000000000215	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_36	1226322.HMPREF1545_00023	51.6	0.000002	N/A	N/A
KOfam	UHGV-0360257_39	K19779	41.1	0.000000000019	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-0360257_39	phrog_599	47.4	0.00000000000037	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0360257_39	UniRef90_UPI0018983B82	62.0	0.000000000262	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0360257_39	10704.B4UTV4_BP163	51.6	0.00000135	N/A	N/A
Pfam	UHGV-0360257_39	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0360257_39	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0360257_39	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-0360257_40	phrog_8538	139.3	1.49995e-41	N/A	unknown function
eggNOG-mapper	UHGV-0360257_40	1196322.A370_02189	129.0	8.63e-37	N/A	N/A
eggNOG-mapper	UHGV-0360257_42	1232449.BAHV02000016_gene1829	116.0	1.35e-31	N/A	N/A
PHROG	UHGV-0360257_45	phrog_2872	160.5	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360257_45	UniRef90_A0A6N2R446	311.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_45	903814.ELI_1273	247.0	0	AAA domain	N/A
Pfam	UHGV-0360257_45	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0360257_45	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_47	phrog_18107	74.6	1.7e-21	N/A	unknown function
UniRef90	UHGV-0360257_47	UniRef90_UPI00058F46CC	99.4	7.73e-23	N/A	N/A
eggNOG-mapper	UHGV-0360257_47	476272.RUMHYD_02831	194.0	0	N/A	N/A
structural_annotation	UHGV-0360257_47	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_48	phrog_3490	97.7	1.2e-28	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360257_48	UniRef90_R6N0P8	214.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_48	476272.RUMHYD_01740	174.0	0	ERCC4 domain	N/A
Pfam	UHGV-0360257_48	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-0360257_48	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-0360257_48	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_49	phrog_2514	95.9	4.1e-28	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360257_49	UniRef90_UPI00190F4DCA	110.0	4.11e-27	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0360257_49	646529.Desaci_3039	129.0	3.31e-34	Transcriptional regulator	N/A
COG	UHGV-0360257_49	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
Pfam	UHGV-0360257_50	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
KOfam	UHGV-0360257_51	K17680	295.9	0	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-0360257_51	phrog_239	261.3	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360257_51	UniRef90_R6P3P1	613.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_51	476272.RUMHYD_02834	479.0	0	N/A	N/A
Pfam	UHGV-0360257_51	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0360257_51	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0360257_51	PF03796,PF19898,MF_04154,TIGR03877,TIGR01391,COG0467,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0360257_54	phrog_606	43.8	0.0000000000025	terminase small subunit	head and packaging
UniRef90	UHGV-0360257_54	UniRef90_UPI001D08D6B6	102.0	6.68e-24	DNA-packaging protein	N/A
structural_annotation	UHGV-0360257_54	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360257_55	991905.SL003B_3762	56.2	0.00000000387	N/A	N/A
KOfam	UHGV-0360257_57	K06400	205.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0360257_57	phrog_95	200.8	0	integrase	integration and excision
UniRef90	UHGV-0360257_57	UniRef90_A0A1Y4EQR6	463.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0360257_57	697329.Rumal_3466	359.0	0	resolvase	N/A
Pfam	UHGV-0360257_57	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0360257_57	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0360257_57	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0360257_57	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0360257_59	K07449	140.7	6.8005e-42	K07449; similar to archaeal holliday junction resolvase and Mrr protein	N/A
PHROG	UHGV-0360257_59	phrog_19856	70.9	1.5e-20	N/A	unknown function
UniRef90	UHGV-0360257_59	UniRef90_A0A2A7AAF6	152.0	8.47786e-43	Mrr_cat domain-containing protein	N/A
eggNOG-mapper	UHGV-0360257_59	483218.BACPEC_00447	124.0	4.56e-34	Restriction endonuclease	N/A
PADLOC	UHGV-0360257_59	ZorD1_00005	87.4	1.7e-25	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0360257_59	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0360257_59	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
PHROG	UHGV-0360257_60	phrog_38	180.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0360257_60	UniRef90_A0A810QA10	639.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0360257_60	1298920.KI911353_gene2682	445.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0360257_60	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0360257_60	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0360257_60	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0360257	Yes	39,891	45	100	1