Viral OTU vOTU-053624

vOTU: vOTU-053624

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-053624
Number of Genomes	4
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00027 → vGENUS-00359 → vSUBGEN-26461 → vOTU-053624
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0854866
Biosample ID	SAMN04415497
Length	34,522 bps
CheckV Completeness	100.00% (Complete)
CDS Count	48
CDS Density	91.63%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0854866_1	K03546	63.9	1.7e-18	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0854866_1	phrog_1499	479.6	0	N/A	unknown function
UniRef90	UHGV-0854866_1	UniRef90_A0A2N0UXU2	752.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0854866_1	645991.Sgly_0320	504.0	0	domain protein	N/A
Pfam	UHGV-0854866_1	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0854866_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0854866_1	TIGR03185,COG5293	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_3	phrog_124	263.2	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0854866_3	UniRef90_A0A2N0UXR5	684.0	0	Phage nucleotide-binding protein	N/A
eggNOG-mapper	UHGV-0854866_3	1123304.AQYA01000037_gene196	438.0	0	AAA domain	N/A
Pfam	UHGV-0854866_3	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0854866_3	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_4	phrog_2698	176.6	0	N/A	unknown function
UniRef90	UHGV-0854866_4	UniRef90_UPI000F54335B	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0854866_4	742723.HMPREF9477_00927	139.0	7.44e-40	N/A	N/A
structural_annotation	UHGV-0854866_4	PF17426,NF005674	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_5	K17677	361.7	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0854866_5	phrog_16	296.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0854866_5	UniRef90_A0A412ULZ3	1040.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-0854866_5	1235792.C808_05388	838.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-0854866_5	mREase_IV_00005	134.2	1.1e-39	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0854866_5	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0854866_5	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0854866_5	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0854866_5	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_6	K07505	401.5	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0854866_6	phrog_2597	1165.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0854866_6	UniRef90_A0A2N0UXP7	1484.0	0	Regulatory protein RepA	N/A
eggNOG-mapper	UHGV-0854866_6	394503.Ccel_3304	967.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0854866_6	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0854866_6	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0854866_6	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0854866_6	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_8	K01160	40.5	0.000000000066	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0854866_8	phrog_140	94.5	1.1e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0854866_8	UniRef90_A0A2N0UXU6	274.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0854866_8	411462.DORLON_00806	206.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0854866_8	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0854866_8	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0854866_8	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0854866_9	PF02559,MF_00667,TIGR02861	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_11	phrog_757	141.5	3.89981e-42	DNA methyltransferase	other
UniRef90	UHGV-0854866_11	UniRef90_A0A417JTT5	249.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0854866_11	1235790.C805_00032	169.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0854866_11	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0854866_12	TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_13	K07474	87.0	4.3e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0854866_13	phrog_51	87.7	1.1e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0854866_13	UniRef90_A0A2N0UXP4	241.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0854866_13	1160721.RBI_II00483	106.0	1.18e-27	DNA packaging	N/A
Pfam	UHGV-0854866_13	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0854866_13	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0854866_13	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_14	K06909	111.2	1.1e-32	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0854866_14	phrog_2	81.1	2.1e-23	terminase large subunit	head and packaging
UniRef90	UHGV-0854866_14	UniRef90_A0A374N1S8	902.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0854866_14	1282664.H354_06621	646.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0854866_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0854866_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0854866_14	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_15	phrog_533	258.5	0	portal protein	head and packaging
UniRef90	UHGV-0854866_15	UniRef90_A0A3D0XB31	921.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0854866_15	742740.HMPREF9474_03501	450.0	0	N/A	N/A
structural_annotation	UHGV-0854866_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_16	phrog_581	237.5	0	minor head protein	head and packaging
UniRef90	UHGV-0854866_16	UniRef90_A0A2N0UXT6	723.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0854866_16	742740.HMPREF9474_03503	398.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0854866_16	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0854866_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0854866_16	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_18	phrog_2616	46.1	0.000000000001	N/A	unknown function
structural_annotation	UHGV-0854866_18	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_19	phrog_2303	131.8	5.6e-39	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0854866_19	1304866.K413DRAFT_0806	139.0	9.17e-39	N/A	N/A
PHROG	UHGV-0854866_20	phrog_422	282.4	0	major head protein	head and packaging
UniRef90	UHGV-0854866_20	UniRef90_UPI001C03381A	492.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0854866_20	445972.ANACOL_01845	382.0	0	N/A	N/A
structural_annotation	UHGV-0854866_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0854866_21	483218.BACPEC_01153	91.3	2.96e-22	N/A	N/A
PHROG	UHGV-0854866_22	phrog_8710	149.6	5.60519e-45	N/A	unknown function
eggNOG-mapper	UHGV-0854866_22	33035.JPJF01000093_gene2249	114.0	3.66e-31	N/A	N/A
structural_annotation	UHGV-0854866_22	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_23	phrog_556	59.6	5.3e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0854866_23	742740.HMPREF9474_03509	140.0	3.31996e-41	N/A	N/A
PHROG	UHGV-0854866_24	phrog_2595	99.3	3e-29	head-tail connector protein	connector
UniRef90	UHGV-0854866_24	UniRef90_UPI001D0627B3	134.0	6.71e-38	minor capsid protein	N/A
eggNOG-mapper	UHGV-0854866_24	1123263.AUKY01000051_gene1075	146.0	1.63952e-43	N/A	N/A
Pfam	UHGV-0854866_24	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0854866_24	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_25	phrog_820	111.2	6.6e-33	major tail protein	tail
eggNOG-mapper	UHGV-0854866_25	1282664.H354_06691	177.0	0	N/A	N/A
structural_annotation	UHGV-0854866_25	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_26	phrog_8300	74.7	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0854866_26	483218.BACPEC_01148	70.5	0.0000000000000231	N/A	N/A
structural_annotation	UHGV-0854866_26	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_27	phrog_8355	105.9	1.2e-31	N/A	unknown function
UniRef90	UHGV-0854866_27	UniRef90_UPI001C0B4BD8	90.9	3.6e-22	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0854866_27	1262449.CP6013_3207	82.4	6.82e-20	N/A	N/A
PHROG	UHGV-0854866_28	phrog_5319	63.5	2e-18	outer membrane protein	other
UniRef90	UHGV-0854866_28	UniRef90_A0A1Q6JN93	368.0	0	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0854866_28	1042156.CXIVA_15870	96.3	2.08e-20	sh3 domain protein	N/A
Pfam	UHGV-0854866_28	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-0854866_28	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0854866_28	PF03843,PF12773,MF_00984,TIGR00752,COG3065	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_29	phrog_58	134.5	1.2e-40	tail length tape measure protein	tail
UniRef90	UHGV-0854866_29	UniRef90_A0A2N0UYY1	1492.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0854866_29	1160721.RBI_II00528	331.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0854866_29	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0854866_29	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_30	phrog_1194	79.2	4.1e-23	N/A	unknown function
UniRef90	UHGV-0854866_30	UniRef90_A0A8D9PDT1	98.6	6.75e-24	YolD-like protein	N/A
eggNOG-mapper	UHGV-0854866_30	1304866.K413DRAFT_3047	113.0	1.55e-30	N/A	N/A
Pfam	UHGV-0854866_30	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0854866_30	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0854866_31	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_33	phrog_4105	79.0	4.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0854866_33	1291050.JAGE01000001_gene433	72.8	0.00000000000000539	N/A	N/A
PHROG	UHGV-0854866_34	phrog_881	87.2	9e-26	holin	lysis
UniRef90	UHGV-0854866_34	UniRef90_A0A4Q7P349	103.0	1.59e-27	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0854866_34	742740.HMPREF9474_02251	106.0	1.74e-29	Putative phage holin Dp-1	N/A
Pfam	UHGV-0854866_34	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0854866_34	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_35	phrog_21357	41.2	0.000000000017	endolysin	lysis
UniRef90	UHGV-0854866_35	UniRef90_A0A2N0UI19	524.0	0	Putative peptidoglycan binding domain protein	N/A
Pfam	UHGV-0854866_35	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0854866_35	COG3942	N/A	N/A	Surface antigen	N/A
structural_annotation	UHGV-0854866_35	PF01471,TIGR02594,NF038080,COG3409,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_36	K14059	209.7	0	int; integrase	N/A
PHROG	UHGV-0854866_36	phrog_1	185.0	0	integrase	integration and excision
UniRef90	UHGV-0854866_36	UniRef90_A0A2N0ULT2	788.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0854866_36	428125.CLOLEP_02743	317.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0854866_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0854866_36	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0854866_36	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0854866_37	UniRef90_UPI001D095173	90.5	3.14e-20	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-0854866_37	1031288.AXAA01000014_gene407	58.5	0.0000000112	Preprotein translocase subunit SecB	N/A
structural_annotation	UHGV-0854866_37	PF02556,MF_00821,NF004392,COG1952	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_38	K07729	45.6	0.0000000000014	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0854866_38	UniRef90_A0A412UNZ9	249.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0854866_38	1280688.AUJB01000009_gene1936	89.4	5.12e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0854866_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0854866_38	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
UniRef90	UHGV-0854866_39	UniRef90_UPI0007E1B082	64.7	0.00000000000311	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0854866_39	1232443.BAIA02000106_gene3117	71.2	0.00000000000000988	N/A	N/A
structural_annotation	UHGV-0854866_39	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0854866_40	K22299	67.8	2.3e-19	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0854866_40	phrog_8	68.7	1.2e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0854866_40	UniRef90_A0A412L7U4	212.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0854866_40	1111454.HMPREF1250_1028	90.5	6.27e-22	carbohydrate binding	N/A
PADLOC	UHGV-0854866_40	retron_type_VI_hth_cluster2_1	64.1	2e-18	N/A	Retron
Pfam	UHGV-0854866_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0854866_40	COG2390	N/A	N/A	DNA-binding transcriptional regulator LsrR, DeoR family	N/A
structural_annotation	UHGV-0854866_40	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0854866_44	phrog_2232	70.4	2.9e-20	N/A	unknown function
UniRef90	UHGV-0854866_44	UniRef90_A0A7X5IUG6	50.8	0.00000623	N/A	N/A
eggNOG-mapper	UHGV-0854866_44	748224.HMPREF9436_01448	58.5	0.0000000123	N/A	N/A
Pfam	UHGV-0854866_44	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
PHROG	UHGV-0854866_45	phrog_2232	136.8	1.50001e-40	N/A	unknown function
UniRef90	UHGV-0854866_45	UniRef90_UPI00164B82D7	303.0	0	N/A	N/A
eggNOG-mapper	UHGV-0854866_45	748224.HMPREF9436_01448	108.0	1.62e-26	N/A	N/A
Pfam	UHGV-0854866_45	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
UniRef90	UHGV-0854866_47	UniRef90_A0A2N0ULT9	132.0	2.02e-39	DNA binding domain, excisionase family	N/A
Pfam	UHGV-0854866_47	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0854866_47	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0854866_47	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
structural_annotation	UHGV-0854866_47	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0854866	Yes	34,522	42	100	1
UHGV-1338508	No	34,961	42	91	1
UHGV-0160524	No	30,600	42	80	1
UHGV-2143136	No	12,299	42	35	1