Viral OTU vOTU-055642

vOTU: vOTU-055642

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-055642
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00045 → vSUBFAM-00741 → vGENUS-00694 → vSUBGEN-00326 → vOTU-055642
Host Lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Duodenibacillus → Duodenibacillus massiliensis
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1364596
Biosample ID	N/A
Length	39,513 bps
CheckV Completeness	100.00% (Complete)
CDS Count	65
CDS Density	96.54%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1364596_1	phrog_15127	290.1	0	head protein	head and packaging
UniRef90	UHGV-1364596_1	UniRef90_A0A1Y4GG87	384.0	0	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-1364596_1	1408428.JNJP01000012_gene1114	212.0	0	protein homolog of phage Mu protein gp30	N/A
Pfam	UHGV-1364596_1	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1364596_1	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_1	NF011418,COG1372	N/A	N/A	N/A	N/A
KOfam	UHGV-1364596_2	K09961	342.8	0	N/A	N/A
PHROG	UHGV-1364596_2	phrog_146	283.7	0	portal protein	head and packaging
UniRef90	UHGV-1364596_2	UniRef90_UPI001D0BAEDD	330.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364596_2	1408428.JNJP01000012_gene1113	329.0	0	N/A	N/A
Pfam	UHGV-1364596_2	PF06381	N/A	N/A	Anti-CBASS protein Acb1-like	Abc1-like
COG	UHGV-1364596_2	COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_2	PF06381,MF_04135,TIGR01555,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1364596_3	K06909	368.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1364596_3	phrog_3717	248.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1364596_3	UniRef90_A0A139K4Q1	577.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1364596_3	556268.OFAG_00321	468.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-1364596_3	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1364596_3	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1364596_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1364596_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-1364596_4	phrog_309	54.1	0.000000000000001	terminase small subunit	head and packaging
UniRef90	UHGV-1364596_4	UniRef90_UPI001F4FD8EF	129.0	3.92e-36	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1364596_4	742823.HMPREF9465_00949	147.0	1.23314e-43	N/A	N/A
structural_annotation	UHGV-1364596_5	PF06530,NF008895,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-1364596_6	K01160	49.3	0.00000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1364596_6	phrog_140	132.8	1.9e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364596_6	UniRef90_A0A3B9Q6M1	107.0	6.18e-27	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1364596_6	279238.Saro_3008	95.9	1.97e-23	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1364596_6	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1364596_6	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1364596_6	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_9	COG3201	N/A	N/A	N/A	N/A
KOfam	UHGV-1364596_12	K17680	140.7	9.90017e-42	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1364596_12	phrog_5482	172.3	0	N/A	unknown function
UniRef90	UHGV-1364596_12	UniRef90_A0A7U9FFB5	193.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1364596_12	398578.Daci_1933	180.0	0	DnaB-like helicase C terminal domain	N/A
Pfam	UHGV-1364596_12	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1364596_12	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1364596_12	PF03796,MF_04154,NF004109,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_14	phrog_1032	46.2	0.00000000000081	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1364596_14	1203554.HMPREF1476_00237	91.3	2.32e-18	Helix-turn-helix domain	N/A
Pfam	UHGV-1364596_14	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1364596_14	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
structural_annotation	UHGV-1364596_14	PF10007,MF_01909,NF040939,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_15	phrog_270	46.9	0.0000000000006	replication initiation protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1364596_15	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1364596_15	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
PHROG	UHGV-1364596_17	phrog_1281	62.1	8.2e-18	N/A	unknown function
UniRef90	UHGV-1364596_17	UniRef90_UPI00063DB241	100.0	2.38e-24	N/A	N/A
eggNOG-mapper	UHGV-1364596_17	393921.HQ45_06855	63.5	0.0000000000848	Phage-associated protein	N/A
COG	UHGV-1364596_17	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_17	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_21	phrog_2324	153.1	1.4013e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364596_21	UniRef90_A0A6J5KNV3	112.0	1.27e-27	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1364596_21	1209989.TepiRe1_1126	103.0	1.28e-24	ERF superfamily	N/A
Pfam	UHGV-1364596_21	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1364596_21	PF04404,COG5055	N/A	N/A	N/A	N/A
KOfam	UHGV-1364596_22	K03111	154.3	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1364596_22	phrog_44	130.8	1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364596_22	UniRef90_R7C2Q7	125.0	3.18e-34	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1364596_22	1163617.SCD_n00654	117.0	1.65e-31	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1364596_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1364596_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1364596_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1364596_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1364596_22	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_23	phrog_253	44.9	0.0000000000023	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1364596_23	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
eggNOG-mapper	UHGV-1364596_31	742821.HMPREF9464_01810	52.4	0.0000000628	N/A	N/A
KOfam	UHGV-1364596_32	K08640	89.1	8.5e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1364596_32	phrog_894	84.1	2.1e-24	endolysin	lysis
UniRef90	UHGV-1364596_32	UniRef90_A0A3B9QA10	242.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1364596_32	641832.C3VVT1_9CAUD	90.5	1.35e-21	Peptidase M15	N/A
Pfam	UHGV-1364596_32	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
structural_annotation	UHGV-1364596_32	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_33	phrog_199	68.0	1.1e-19	holin	lysis
UniRef90	UHGV-1364596_33	UniRef90_UPI000A02732D	284.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1364596_33	742821.HMPREF9464_01076	103.0	6.02e-26	Bacteriophage holin family	N/A
Pfam	UHGV-1364596_33	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1364596_33	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1364596_33	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1364596_33	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_34	phrog_2143	112.3	4.5e-33	N/A	unknown function
UniRef90	UHGV-1364596_34	UniRef90_UPI00158AE458	97.1	3.34e-21	glucosaminidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1364596_34	742823.HMPREF9465_00917	160.0	0	N/A	N/A
PHROG	UHGV-1364596_35	phrog_19111	127.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1364596_35	1297617.JPJD01000034_gene670	69.3	0.000000000447	N/A	N/A
structural_annotation	UHGV-1364596_35	PF16756,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_36	phrog_134	52.4	0.0000000000000072	N/A	unknown function
UniRef90	UHGV-1364596_36	UniRef90_A0A7X9H6W0	72.4	4.34e-16	XkdX family protein	N/A
eggNOG-mapper	UHGV-1364596_36	697281.Mahau_0596	65.5	0.00000000000004	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1364596_36	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1364596_36	PF09693,TIGR01669	N/A	N/A	N/A	N/A
UniRef90	UHGV-1364596_37	UniRef90_R6HCD7	130.0	2.88e-37	RNA binding protein Jsn1 putative	N/A
PHROG	UHGV-1364596_41	phrog_4757	91.2	5e-31	N/A	unknown function
UniRef90	UHGV-1364596_41	UniRef90_A0A1Y0FDD5	87.4	1.49e-17	Cytochrome C biogenesis protein CcdA	N/A
eggNOG-mapper	UHGV-1364596_41	1121377.KB906398_gene1973	113.0	2.27e-28	Phage portal protein, lambda family	N/A
COG	UHGV-1364596_41	COG5511	N/A	N/A	Phage capsid protein	N/A
PHROG	UHGV-1364596_43	phrog_1084	86.5	2.5e-25	N/A	unknown function
UniRef90	UHGV-1364596_43	UniRef90_A0A516LND1	67.4	0.00000000000386	Putative L-shaped tail fiber protein	N/A
eggNOG-mapper	UHGV-1364596_43	742823.HMPREF9465_00200	122.0	1.71e-34	N/A	N/A
structural_annotation	UHGV-1364596_43	PF10651,NF032891,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1364596_44	742823.HMPREF9465_00923	145.0	1.14e-35	Membrane	N/A
Pfam	UHGV-1364596_44	PF11839	N/A	N/A	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
COG	UHGV-1364596_44	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1364596_45	phrog_12796	46.7	0.00000000000051	tail fiber protein	tail
UniRef90	UHGV-1364596_45	UniRef90_UPI0013F616D1	467.0	0	short-chain fatty acid transporter	N/A
eggNOG-mapper	UHGV-1364596_45	762966.HMPREF9439_01055	316.0	0	tail collar domain protein	N/A
COG	UHGV-1364596_45	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1364596_45	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_46	phrog_374	195.1	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1364596_46	UniRef90_C9KJA8	181.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1364596_46	500635.MITSMUL_03105	181.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
COG	UHGV-1364596_46	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
PHROG	UHGV-1364596_47	phrog_587	95.2	5e-29	structural protein	head and packaging
UniRef90	UHGV-1364596_47	UniRef90_UPI0013F5E2B1	260.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364596_47	742823.HMPREF9465_00926	255.0	0	N/A	N/A
Pfam	UHGV-1364596_47	PF11041	N/A	N/A	N/A	DUF2612
structural_annotation	UHGV-1364596_47	PF11041,TIGR02242,COG3948	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_48	phrog_6	157.8	0	baseplate protein	tail
UniRef90	UHGV-1364596_48	UniRef90_K1KI67	537.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-1364596_48	742823.HMPREF9465_00927	537.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-1364596_48	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-1364596_48	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_48	PF04865,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_49	phrog_120	63.1	4.3e-18	baseplate protein	tail
eggNOG-mapper	UHGV-1364596_49	1203554.HMPREF1476_01519	78.2	4.81e-17	N/A	N/A
structural_annotation	UHGV-1364596_49	PF10761,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_50	phrog_3216	53.5	0.0000000000000039	baseplate assembly protein	tail
UniRef90	UHGV-1364596_50	UniRef90_K1JIF5	219.0	0	Phage_spike domain-containing protein	N/A
eggNOG-mapper	UHGV-1364596_50	742823.HMPREF9465_00928	219.0	0	Baseplate assembly protein	N/A
Pfam	UHGV-1364596_50	PF18715	N/A	N/A	Phage spike trimer	Phage_spike
COG	UHGV-1364596_50	COG4540	N/A	N/A	Phage P2 baseplate assembly protein gpV	N/A
structural_annotation	UHGV-1364596_50	PF18352,TIGR01644,COG4384	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_51	phrog_196	107.6	1.6e-31	virion structural protein	head and packaging
UniRef90	UHGV-1364596_51	UniRef90_F3QJE9	225.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1364596_51	469610.HMPREF0189_01203	241.0	0	N/A	N/A
structural_annotation	UHGV-1364596_51	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_52	phrog_349	44.0	0.0000000000038	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1364596_52	1236501.BAJU01000020_gene2009	50.4	0.00000113	N/A	N/A
PHROG	UHGV-1364596_53	phrog_1830	66.2	4.5e-19	N/A	unknown function
UniRef90	UHGV-1364596_53	UniRef90_F3QJE7	87.0	2.28e-18	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1364596_53	469610.HMPREF0189_01201	91.7	6.3e-21	N/A	N/A
structural_annotation	UHGV-1364596_53	PF21821,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_54	phrog_58	56.7	2.8e-16	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1364596_54	742823.HMPREF9465_00932	138.0	8.75e-32	domain protein	N/A
COG	UHGV-1364596_54	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_55	phrog_1932	55.3	7.3e-16	tail assembly chaperone	tail
eggNOG-mapper	UHGV-1364596_55	742823.HMPREF9465_00933	92.0	5.6e-22	N/A	N/A
Pfam	UHGV-1364596_55	PF21822	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
structural_annotation	UHGV-1364596_55	PF21822	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_56	phrog_1964	102.0	5.2e-30	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1364596_56	762966.HMPREF9439_01045	100.0	2.58e-25	N/A	N/A
structural_annotation	UHGV-1364596_56	PF11681,TIGR01603,COG3157	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_57	phrog_205	165.7	0	virion structural protein	head and packaging
UniRef90	UHGV-1364596_57	UniRef90_UPI0013F5A4D1	513.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364596_57	742823.HMPREF9465_00935	493.0	0	N/A	N/A
Pfam	UHGV-1364596_57	PF11863	N/A	N/A	N/A	DUF3383
structural_annotation	UHGV-1364596_57	PF11863,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_58	phrog_1876	75.6	5.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-1364596_58	762966.HMPREF9439_01041	104.0	5.64e-26	N/A	N/A
structural_annotation	UHGV-1364596_58	PF16807	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_59	phrog_1912	47.0	0.00000000000041	head protein	head and packaging
eggNOG-mapper	UHGV-1364596_59	762966.HMPREF9439_01040	105.0	1.04e-26	N/A	N/A
structural_annotation	UHGV-1364596_59	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_60	phrog_222	104.1	1.4e-30	tail protein	tail
UniRef90	UHGV-1364596_60	UniRef90_A0A2G0Q633	84.7	8.03e-18	Bacteriophage protein	N/A
eggNOG-mapper	UHGV-1364596_60	1205683.CAKR01000013_gene1186	76.6	0.00000000000000152	N/A	N/A
PHROG	UHGV-1364596_61	phrog_302	74.7	1.2e-21	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1364596_61	469610.HMPREF0189_01191	101.0	1.85e-25	N/A	N/A
Pfam	UHGV-1364596_61	PF13262	N/A	N/A	N/A	DUF4054
structural_annotation	UHGV-1364596_61	PF13262	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_63	phrog_264	161.5	0	major head protein	head and packaging
UniRef90	UHGV-1364596_63	UniRef90_UPI0010350299	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364596_63	1205683.CAKR01000013_gene1189	264.0	0	Protein conserved in bacteria	N/A
Pfam	UHGV-1364596_63	PF09950	N/A	N/A	N/A	DUF2184
COG	UHGV-1364596_63	COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_63	PF09950,MF_04119,NF041155,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1364596_64	phrog_2122	73.3	3e-21	minor head protein	head and packaging
eggNOG-mapper	UHGV-1364596_64	1408428.JNJP01000012_gene1116	59.7	0.0000000151	N/A	N/A
KOfam	UHGV-1364596_65	K09960	277.6	0	N/A	N/A
PHROG	UHGV-1364596_65	phrog_2229	311.9	0	head maturation protease	head and packaging
UniRef90	UHGV-1364596_65	UniRef90_UPI001E52763D	234.0	0	N/A	N/A
eggNOG-mapper	UHGV-1364596_65	1408428.JNJP01000012_gene1115	216.0	0	N/A	N/A
Pfam	UHGV-1364596_65	PF09979	N/A	N/A	N/A	DUF2213
COG	UHGV-1364596_65	COG3566	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1364596_65	PF09979,TIGR01543,COG3566	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1364596	Yes	39,513	56	100	1