Viral OTU vOTU-056489

vOTU: vOTU-056489

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-056489
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00227 → vGENUS-00662 → vSUBGEN-03938 → vOTU-056489
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-1370039
Biosample ID	N/A
Length	40,641 bps
CheckV Completeness	100.00% (Complete)
CDS Count	68
CDS Density	89.38%
tRNA Count	1
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1370039_2	COG1321	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370039_5	UniRef90_A0A8D9UHA6	162.0	0	Helix-turn-helix XRE-family like protein	N/A
structural_annotation	UHGV-1370039_5	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1370039_6	K14059	157.6	0	int; integrase	N/A
PHROG	UHGV-1370039_6	phrog_1	159.3	0	integrase	integration and excision
UniRef90	UHGV-1370039_6	UniRef90_A0A1C5W824	546.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1370039_6	445972.ANACOL_01797	295.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1370039_6	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1370039_6	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1370039_6	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370039_7	UniRef90_A0A843GWV6	115.0	2.05e-31	Rubrerythrin domain-containing protein	N/A
structural_annotation	UHGV-1370039_8	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_9	phrog_16490	63.6	3.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1370039_9	476272.RUMHYD_01770	54.3	0.00000269	N/A	N/A
PHROG	UHGV-1370039_10	phrog_22984	50.6	0.000000000000032	N/A	unknown function
KOfam	UHGV-1370039_13	K01448	64.3	1.7e-18	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1370039_13	phrog_435	94.2	1.6e-27	endolysin	lysis
UniRef90	UHGV-1370039_13	UniRef90_A0A3D5TEB1	434.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1370039_13	697281.Mahau_0053	162.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1370039_13	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1370039_13	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1370039_13	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1370039_13	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_14	phrog_881	91.5	4.2e-27	holin	lysis
UniRef90	UHGV-1370039_14	UniRef90_UPI001D0692FC	83.6	1.12e-19	phage holin	N/A
eggNOG-mapper	UHGV-1370039_14	476272.RUMHYD_01966	80.5	3.27e-19	Putative phage holin Dp-1	N/A
Pfam	UHGV-1370039_14	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1370039_14	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_15	phrog_1863	70.9	9.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1370039_15	718252.FP2_04900	115.0	7.04e-33	N/A	N/A
PHROG	UHGV-1370039_16	phrog_372	304.6	0	tail protein	tail
UniRef90	UHGV-1370039_16	UniRef90_A0A1C5RHT6	214.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-1370039_16	908340.HMPREF9406_0178	169.0	6.55948e-42	N/A	N/A
Pfam	UHGV-1370039_16	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1370039_16	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1370039_16	PF05895,MF_04116,NF010681,COG3291,COG5608	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_17	phrog_6616	105.6	2.8e-33	tail protein	tail
UniRef90	UHGV-1370039_17	UniRef90_A0A0V8CZK7	77.4	0.0000000000708	Gp58 domain-containing protein	N/A
eggNOG-mapper	UHGV-1370039_17	469596.HMPREF9488_01318	278.0	0	N/A	N/A
structural_annotation	UHGV-1370039_17	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_18	phrog_1194	129.9	7.7e-39	N/A	unknown function
UniRef90	UHGV-1370039_18	UniRef90_A0A1Z5ISU0	99.0	2.4e-24	N/A	N/A
eggNOG-mapper	UHGV-1370039_18	673837.D2IZU9_9CAUD	120.0	1.88e-33	N/A	N/A
Pfam	UHGV-1370039_18	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1370039_18	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_19	phrog_1535	160.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1370039_19	UniRef90_R6TDK7	182.0	1.21913e-43	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1370039_19	1121866.AUGK01000003_gene1437	348.0	0	phage tail tape measure protein	N/A
COG	UHGV-1370039_19	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1370039_19	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1370039_20	1121333.JMLH01000047_gene1011	50.8	0.00000182	N/A	N/A
UniRef90	UHGV-1370039_21	UniRef90_UPI0018999178	140.0	4.43006e-41	N/A	N/A
eggNOG-mapper	UHGV-1370039_21	469596.HMPREF9488_01311	92.4	6.28e-23	N/A	N/A
Pfam	UHGV-1370039_21	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1370039_21	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_22	phrog_158	61.0	2.2e-17	major tail protein	tail
UniRef90	UHGV-1370039_22	UniRef90_A0A1C6L0H9	216.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1370039_22	1232453.BAIF02000058_gene1634	98.6	1.84e-24	N/A	N/A
Pfam	UHGV-1370039_22	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1370039_22	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370039_23	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1370039_24	1298920.KI911353_gene2654	58.5	0.0000000259	N/A	N/A
eggNOG-mapper	UHGV-1370039_25	1298920.KI911353_gene2656	88.2	1.11e-20	N/A	N/A
UniRef90	UHGV-1370039_26	UniRef90_UPI001898B4B4	147.0	5.60519e-44	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1370039_26	1298920.KI911353_gene2658	56.2	0.00000000774	N/A	N/A
Pfam	UHGV-1370039_26	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1370039_26	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_27	phrog_1328	123.6	1.1e-36	major head protein	head and packaging
UniRef90	UHGV-1370039_27	UniRef90_UPI00164DD2D5	587.0	0	N/A	N/A
eggNOG-mapper	UHGV-1370039_27	665956.HMPREF1032_03619	226.0	0	N/A	N/A
Pfam	UHGV-1370039_27	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1370039_27	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_29	phrog_64	220.3	0	portal protein	head and packaging
UniRef90	UHGV-1370039_29	UniRef90_A0A6I2QXE1	691.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1370039_29	1123263.AUKY01000015_gene1609	417.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1370039_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1370039_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_30	phrog_38	147.9	5.60519e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1370039_30	UniRef90_A0A6I2QXZ5	880.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1370039_30	1298920.KI911353_gene2682	291.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1370039_30	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1370039_30	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370039_30	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
Pfam	UHGV-1370039_31	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-1370039_31	PF12869,MF_01959,NF009635,COG4085	N/A	N/A	N/A	N/A
KOfam	UHGV-1370039_32	K14060	141.6	5.59959e-42	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1370039_32	phrog_125	187.7	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370039_32	UniRef90_A6NXH6	231.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1370039_32	411467.BACCAP_02922	231.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1370039_32	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1370039_32	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1370039_32	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_35	phrog_6244	47.8	0.00000000000027	N/A	unknown function
eggNOG-mapper	UHGV-1370039_35	1354300.AUQY01000005_gene215	104.0	2.33e-28	N/A	N/A
UniRef90	UHGV-1370039_36	UniRef90_UPI001D07B715	114.0	9.02e-29	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1370039_36	1235793.C809_00539	56.6	0.000000195	N/A	N/A
Pfam	UHGV-1370039_36	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1370039_36	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1370039_38	693746.OBV_18010	128.0	1.18e-35	N/A	N/A
structural_annotation	UHGV-1370039_38	TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370039_41	UniRef90_A0A8D9PDT5	70.1	0.000000000000605	Hydrogenase/urease nickel incorporation protein	N/A
structural_annotation	UHGV-1370039_42	PF04570	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_43	phrog_3136	138.0	2.59997e-41	N/A	unknown function
UniRef90	UHGV-1370039_43	UniRef90_A0A6N7TMC2	135.0	3.71e-37	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1370039_43	642492.Clole_1416	54.3	0.000000404	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1370039_43	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1370039_43	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_44	phrog_38832	42.5	1.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1370039_44	665956.HMPREF1032_00143	61.2	0.00000000155	N/A	N/A
structural_annotation	UHGV-1370039_44	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_47	phrog_22529	118.1	3.8e-35	N/A	unknown function
UniRef90	UHGV-1370039_47	UniRef90_A0A810Q1V0	291.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-1370039_47	411463.EUBVEN_00667	105.0	8.59e-26	3D domain	N/A
Pfam	UHGV-1370039_47	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1370039_47	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-1370039_47	PF06725,NF040670,COG3584	N/A	N/A	N/A	N/A
KOfam	UHGV-1370039_50	K01160	69.2	9.1e-20	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1370039_50	phrog_34	58.1	1.6e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370039_50	UniRef90_UPI0018ABA1B6	157.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1370039_50	796940.HMPREF9628_00163	112.0	4.17e-30	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1370039_50	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1370039_50	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1370039_50	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370039_52	TIGR00122,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-1370039_53	K00558	169.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1370039_53	phrog_116	202.5	0	DNA methyltransferase	other
UniRef90	UHGV-1370039_53	UniRef90_A0A316NA61	340.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1370039_53	718252.FP2_16350	331.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1370039_53	oMTase_00004	243.8	0	orphan methyltransferase	RM
Pfam	UHGV-1370039_53	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1370039_53	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1370039_53	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1370039_54	K02315	122.3	5.1e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1370039_54	phrog_50	123.2	2.4e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370039_54	UniRef90_A0A810Q3X8	456.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1370039_54	445972.ANACOL_01829	181.0	0	N/A	N/A
Pfam	UHGV-1370039_54	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1370039_54	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1370039_54	PF01695,MF_01919,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_55	phrog_16304	132.9	2.5e-39	N/A	unknown function
UniRef90	UHGV-1370039_55	UniRef90_A0A810PZI8	387.0	0	N/A	N/A
eggNOG-mapper	UHGV-1370039_55	498761.HM1_0053	90.9	7.14e-19	HNH endonuclease	N/A
Pfam	UHGV-1370039_55	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1370039_55	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1370039_55	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1370039_57	K03111	112.0	8e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1370039_57	phrog_44	116.2	3e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370039_57	UniRef90_A0A810PUK9	241.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1370039_57	1203606.HMPREF1526_01880	106.0	7.31e-28	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1370039_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1370039_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1370039_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1370039_57	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1370039_57	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_59	phrog_72	50.8	0.0000000000000041	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370039_59	UniRef90_A0A8D9PDS2	269.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1370039_59	445972.ANACOL_01825	152.0	2.52234e-44	N/A	N/A
structural_annotation	UHGV-1370039_59	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1370039_60	phrog_434	40.9	0.000000000024	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370039_60	UniRef90_B0PAM4	157.0	1.4013e-45	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-1370039_60	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370039_61	UniRef90_A0A845QLQ8	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-1370039_61	33035.JPJF01000135_gene5082	125.0	3.43e-33	N/A	N/A
Pfam	UHGV-1370039_61	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1370039_61	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370039_62	PF00412	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370039_65	UniRef90_A0A8D9PDM8	73.2	0.000000000000001	Pyocin activator protein	N/A
structural_annotation	UHGV-1370039_65	PF11112,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370039_66	UniRef90_A0A810QCI5	55.8	0.00000000908	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1370039_66	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1370039_66	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1370039_66	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1370039	Yes	40,641	52	100	1