Viral OTU vOTU-058097

vOTU: vOTU-058097

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-058097
Number of Genomes	4
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00178 → vSUBFAM-02478 → vGENUS-03031 → vSUBGEN-04007 → vOTU-058097
Host Lineage	Bacteria → Proteobacteria → Alphaproteobacteria → RF32 → CAG-239 → 51-20 → 51-20 sp001917175
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-0074709
Biosample ID	SAMEA2737776
Length	43,543 bps
CheckV Completeness	100.00% (Complete)
CDS Count	69
CDS Density	92.38%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0074709_1	563031.HMPREF0666_01114	111.0	4.6e-27	N/A	N/A
structural_annotation	UHGV-0074709_4	PF11195	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0074709_6	1120978.KB894087_gene426	80.1	1.89e-17	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0074709_6	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
KOfam	UHGV-0074709_11	K00558	250.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0074709_11	phrog_116	260.8	0	DNA methyltransferase	other
UniRef90	UHGV-0074709_11	UniRef90_A0A1H4YUP8	299.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0074709_11	620914.JH621248_gene3074	264.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0074709_11	MTase_II_00058	233.5	0	Type II methyltransferase	RM
Pfam	UHGV-0074709_11	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0074709_11	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0074709_11	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0074709_11	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074709_12	PF15731,NF041951,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074709_13	PF00210,MF_01441,NF006975,COG0783	N/A	N/A	N/A	N/A
KOfam	UHGV-0074709_14	K24217	50.3	0.000000000000053	mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]	N/A
PHROG	UHGV-0074709_14	phrog_3810	50.2	0.000000000000041	acetyltransferase	other
eggNOG-mapper	UHGV-0074709_14	675814.VIC_004133	53.5	0.000000879	FR47-like protein	N/A
Pfam	UHGV-0074709_14	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
COG	UHGV-0074709_14	COG1670	N/A	N/A	Protein N-acetyltransferase, RimJ/RimL family	N/A
structural_annotation	UHGV-0074709_15	PF04447,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_16	phrog_56	72.9	2.7e-34	DNA methyltransferase	other
UniRef90	UHGV-0074709_16	UniRef90_UPI00164C574E	265.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0074709_16	1236504.HMPREF2132_01695	134.0	1.27e-33	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0074709_16	MTase_II_00075	51.6	2.2e-25	Type II methyltransferase	RM
Pfam	UHGV-0074709_16	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-0074709_16	NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_17	phrog_2412	47.9	0.00000000000019	N/A	unknown function
UniRef90	UHGV-0074709_17	UniRef90_UPI0011CC13F5	58.5	0.0000000526	stress-induced protein	N/A
eggNOG-mapper	UHGV-0074709_17	742738.HMPREF9460_02504	55.1	0.000000136	N/A	N/A
PHROG	UHGV-0074709_18	phrog_38	234.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0074709_18	UniRef90_A0A843HLI4	412.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0074709_18	563192.HMPREF0179_00169	229.0	0	Terminase RNaseH-like domain	N/A
Pfam	UHGV-0074709_18	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0074709_18	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0074709_18	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0074709_18	PF17289,PF05876,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-0074709_19	K09961	274.9	0	N/A	N/A
PHROG	UHGV-0074709_19	phrog_146	279.0	0	portal protein	head and packaging
UniRef90	UHGV-0074709_19	UniRef90_E5Y1W1	372.0	0	HI1409 family phage-associated protein	N/A
eggNOG-mapper	UHGV-0074709_19	563192.HMPREF0179_00170	372.0	0	Phage-associated protein, HI1409 family	N/A
Pfam	UHGV-0074709_19	PF06381	N/A	N/A	Anti-CBASS protein Acb1-like	Abc1-like
COG	UHGV-0074709_19	COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074709_19	PF06381,MF_04135,TIGR01555,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_20	phrog_15127	175.2	0	head protein	head and packaging
UniRef90	UHGV-0074709_20	UniRef90_A0A357BWK1	300.0	0	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-0074709_20	563192.HMPREF0179_00171	197.0	0	Portal protein	N/A
Pfam	UHGV-0074709_20	PF14890	N/A	N/A	Intein splicing domain	Intein_splicing
COG	UHGV-0074709_20	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_26	phrog_531	52.6	0.000000000000011	Rnase H	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0074709_26	PF00075	N/A	N/A	RNase H	RNase_H
PHROG	UHGV-0074709_28	phrog_374	198.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074709_28	UniRef90_G9B1F6	177.0	0	Gp55	N/A
eggNOG-mapper	UHGV-0074709_28	500635.MITSMUL_03105	177.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
COG	UHGV-0074709_28	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0074709_28	PF17375	N/A	N/A	N/A	N/A
KOfam	UHGV-0074709_29	K01185	76.8	4.3e-22	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0074709_29	phrog_7	117.2	1.9e-34	endolysin	lysis
UniRef90	UHGV-0074709_29	UniRef90_A0A1J0LP19	105.0	4.59e-26	Lysozyme	N/A
eggNOG-mapper	UHGV-0074709_29	755178.Cyan10605_3537	79.7	4.16e-16	PFAM Phage lysozyme	N/A
Pfam	UHGV-0074709_29	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-0074709_29	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0074709_29	PF00959,MF_04110,COG3772	N/A	N/A	N/A	N/A
KOfam	UHGV-0074709_35	K10906	42.2	2.9e-18	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0074709_35	phrog_412	165.3	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074709_35	UniRef90_A0A843HS31	288.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
Pfam	UHGV-0074709_35	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0074709_35	COG3857	N/A	N/A	ATP-dependent helicase/DNAse subunit B	N/A
structural_annotation	UHGV-0074709_35	PF12684,MF_03030,TIGR01896,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0074709_37	K09960	158.5	0	N/A	N/A
PHROG	UHGV-0074709_37	phrog_530	133.6	1.7e-39	head maturation protease	head and packaging
eggNOG-mapper	UHGV-0074709_37	563192.HMPREF0179_00172	202.0	0	N/A	N/A
Pfam	UHGV-0074709_37	PF09979	N/A	N/A	N/A	DUF2213
COG	UHGV-0074709_37	COG3566	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074709_37	PF09979,TIGR01543,COG3566	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_38	phrog_28344	45.8	0.00000000000044	N/A	unknown function
PHROG	UHGV-0074709_39	phrog_264	138.5	4.19997e-41	major head protein	head and packaging
UniRef90	UHGV-0074709_39	UniRef90_A0A7C9G8W4	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0074709_39	563192.HMPREF0179_00174	325.0	0	N/A	N/A
Pfam	UHGV-0074709_39	PF09950	N/A	N/A	N/A	DUF2184
COG	UHGV-0074709_39	COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074709_39	PF09950,MF_04113,TIGR01554,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_41	phrog_302	53.6	0.0000000000000041	virion structural protein	head and packaging
Pfam	UHGV-0074709_41	PF13262	N/A	N/A	N/A	DUF4054
structural_annotation	UHGV-0074709_41	PF13262	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_42	phrog_222	112.3	4.2e-33	tail protein	tail
UniRef90	UHGV-0074709_42	UniRef90_A0A1Y2S9M6	59.7	0.000000037	Bacteriophage protein	N/A
eggNOG-mapper	UHGV-0074709_42	1392838.AWNM01000071_gene627	68.6	0.00000000000195	N/A	N/A
structural_annotation	UHGV-0074709_44	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_45	phrog_205	141.3	7.00649e-45	virion structural protein	head and packaging
UniRef90	UHGV-0074709_45	UniRef90_UPI001642065D	112.0	1.17e-22	N/A	N/A
eggNOG-mapper	UHGV-0074709_45	563192.HMPREF0179_00180	246.0	0	N/A	N/A
Pfam	UHGV-0074709_45	PF11863	N/A	N/A	N/A	DUF3383
structural_annotation	UHGV-0074709_45	PF11863,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_46	phrog_280	44.0	0.0000000000034	virion structural protein	head and packaging
structural_annotation	UHGV-0074709_46	PF11681,TIGR02241,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-0074709_47	PF21822	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
PHROG	UHGV-0074709_48	phrog_8125	189.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0074709_48	UniRef90_A0A3D1C5V6	102.0	3.25e-19	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0074709_48	640511.BC1002_6556	97.8	1.57e-18	phage tail tape measure protein	N/A
COG	UHGV-0074709_48	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0074709_49	phrog_817	102.2	4.5e-30	tail fiber protein	tail
eggNOG-mapper	UHGV-0074709_49	395019.Bmul_1813	58.9	0.0000000335	N/A	N/A
Pfam	UHGV-0074709_49	PF21821	N/A	N/A	Dit-like phage tail protein	Dit_like
structural_annotation	UHGV-0074709_49	PF21821,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_51	phrog_196	155.2	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0074709_51	1220714.L7TK18_9CAUD	79.3	0.0000000000000247	N/A	N/A
structural_annotation	UHGV-0074709_51	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0074709_52	UniRef90_A0A7C9G7N0	95.1	5.47e-20	Gp138_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0074709_52	291112.PAU_01574	72.4	0.00000000000261	Baseplate assembly protein	N/A
Pfam	UHGV-0074709_52	PF18352	N/A	N/A	N/A	Gp138_N
COG	UHGV-0074709_52	COG4540	N/A	N/A	Phage P2 baseplate assembly protein gpV	N/A
structural_annotation	UHGV-0074709_52	PF18352,TIGR01644,COG4384	N/A	N/A	N/A	N/A
KOfam	UHGV-0074709_53	K02314	250.1	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0074709_53	phrog_19	236.8	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074709_53	UniRef90_A0A3B9YW78	161.0	5.77994e-41	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0074709_53	1353537.TP2_02695	158.0	1.82001e-40	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	N/A
Pfam	UHGV-0074709_53	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0074709_53	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0074709_53	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_54	phrog_345	50.6	0.000000000000033	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0074709_54	1122971.BAME01000058_gene4477	54.7	0.00000199	HNH endonuclease	N/A
Pfam	UHGV-0074709_54	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0074709_54	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0074709_55	phrog_120	70.4	2.7e-20	baseplate protein	tail
UniRef90	UHGV-0074709_55	UniRef90_A0A0H3FH61	71.6	0.000000000000104	Putative bacteriophage protein	N/A
eggNOG-mapper	UHGV-0074709_55	741091.Rahaq_5012	71.6	0.0000000000000174	N/A	N/A
PHROG	UHGV-0074709_56	phrog_6	178.2	0	baseplate protein	tail
UniRef90	UHGV-0074709_56	UniRef90_A0A353T659	287.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-0074709_56	712898.Pvag_1689	164.0	9.66896e-44	homolog of phage Mu protein gp47	N/A
Pfam	UHGV-0074709_56	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0074709_56	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0074709_56	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_57	phrog_587	72.2	7e-21	structural protein	head and packaging
Pfam	UHGV-0074709_57	PF11041	N/A	N/A	N/A	DUF2612
structural_annotation	UHGV-0074709_57	PF11041,TIGR02242,COG3948	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0074709_58	563192.HMPREF0179_00197	74.7	0.00000000000583	tail collar domain protein	N/A
COG	UHGV-0074709_58	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0074709_60	PF14282	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_61	phrog_824	107.7	7e-32	N/A	unknown function
UniRef90	UHGV-0074709_61	UniRef90_A5ZE96	105.0	2.2e-26	VRR-NUC domain protein	N/A
eggNOG-mapper	UHGV-0074709_61	411901.BACCAC_01208	105.0	3.69e-27	N/A	N/A
Pfam	UHGV-0074709_61	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-0074709_63	K07455	184.4	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0074709_63	phrog_148	196.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0074709_63	UniRef90_A0A7C6P2G6	268.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0074709_63	1095750.HMPREF9970_1675	244.0	0	RecT family	N/A
Pfam	UHGV-0074709_63	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0074709_63	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0074709_63	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0074709_63	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0074709_66	phrog_5558	52.4	0.0000000000000079	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
KOfam	UHGV-0074709_67	K02313	52.5	0.0000000000000063	dnaA; chromosomal replication initiator protein	N/A
Pfam	UHGV-0074709_67	PF08299	N/A	N/A	Bacterial dnaA protein helix-turn-helix	Bac_DnaA_C
Pfam	UHGV-0074709_67	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0074709_67	COG0593	N/A	N/A	Chromosomal replication initiation ATPase DnaA	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0074709	Yes	43,543	44	100	1
UHGV-1381489	No	43,543	44	100	1
UHGV-1382676	No	43,303	44	100	1
UHGV-0188438	No	43,282	44	100	1