Viral OTU vOTU-058402

vOTU: vOTU-058402

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-058402
Number of Genomes	2
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00016 → vSUBFAM-00700 → vGENUS-03494 → vSUBGEN-25486 → vOTU-058402
Host Lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Succinivibrionaceae → Succinivibrio → Succinivibrio sp000431835
Viral Lifestyle	lytic

Representative Genome
Genome ID	UHGV-1465495
Biosample ID	SAMN02334056
Length	33,637 bps
CheckV Completeness	100.00% (Complete)
CDS Count	45
CDS Density	89.81%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1465495_1	phrog_184	241.8	0	DNA circularization	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_1	UniRef90_R5EKZ8	799.0	0	DNA_circ_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1465495_1	742821.HMPREF9464_01823	195.0	0	DNA circularisation protein N-terminus	N/A
Pfam	UHGV-1465495_1	PF07157	N/A	N/A	DNA circularisation protein N-terminus	DNA_circ_N
COG	UHGV-1465495_1	COG4228	N/A	N/A	Mu-like prophage DNA circulation protein	N/A
structural_annotation	UHGV-1465495_1	PF07157,TIGR01633,COG4228	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_2	phrog_8462	196.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1465495_2	UniRef90_A0A6M7VJ61	157.0	6.16e-37	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1465495_2	331869.BAL199_07943	95.1	2.71e-17	phage tail tape measure protein	N/A
Pfam	UHGV-1465495_2	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1465495_2	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1465495_2	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_3	phrog_166	40.4	0.000000000047	tail protein	tail
UniRef90	UHGV-1465495_3	UniRef90_R5EZ88	185.0	0	Putative bacteriophage protein	N/A
eggNOG-mapper	UHGV-1465495_3	1224136.AMFN01000003_gene3617	69.7	0.0000000000000226	Phage tail assembly chaperone proteins, E, or 41 or 14	N/A
Pfam	UHGV-1465495_3	PF10109	N/A	N/A	Phage tail assembly chaperone proteins, E, or 41 or 14	Phage_TAC_7
structural_annotation	UHGV-1465495_3	PF10109,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_4	phrog_185	105.8	2.4e-31	tail tube protein	tail
UniRef90	UHGV-1465495_4	UniRef90_A0A524BF51	136.0	3.75e-39	Phage tail protein	N/A
eggNOG-mapper	UHGV-1465495_4	343509.SG0718	116.0	5.51e-32	phage tail	N/A
Pfam	UHGV-1465495_4	PF10618	N/A	N/A	Phage tail tube protein	Tail_tube
structural_annotation	UHGV-1465495_4	PF10618,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_5	phrog_165	607.5	0	tail sheath	tail
UniRef90	UHGV-1465495_5	UniRef90_R5ELR7	950.0	0	Mu tail sheath family protein	N/A
eggNOG-mapper	UHGV-1465495_5	742821.HMPREF9464_01827	473.0	0	tail sheath	N/A
Pfam	UHGV-1465495_5	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-1465495_5	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
COG	UHGV-1465495_5	COG4386	N/A	N/A	Mu-like prophage tail sheath protein gpL	N/A
structural_annotation	UHGV-1465495_5	PF10758,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_6	phrog_209	90.9	1.3e-26	portal protein	head and packaging
UniRef90	UHGV-1465495_6	UniRef90_A0A8G2M0W4	84.7	7.23e-16	N/A	N/A
eggNOG-mapper	UHGV-1465495_6	754331.AEME01000001_gene210	84.3	1.28e-17	N/A	N/A
structural_annotation	UHGV-1465495_6	PF09646	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_7	phrog_879	48.7	0.0000000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-1465495_7	UniRef90_A0A088UAH4	59.7	0.0000000183	Bacteriophage HK97-gp10, tail-component family protein	N/A
structural_annotation	UHGV-1465495_7	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_8	phrog_25	42.2	0.000000000013	head closure Hc1	connector
eggNOG-mapper	UHGV-1465495_8	1221522.B723_10620	73.6	0.00000000000000746	Phage head-tail joining protein	N/A
COG	UHGV-1465495_8	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1465495_8	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_9	phrog_40	62.6	4.4e-18	head-tail adaptor Ad1	connector
eggNOG-mapper	UHGV-1465495_9	557598.LHK_01771	59.7	0.000000000502	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1465495_9	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1465495_9	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
PHROG	UHGV-1465495_10	phrog_10	187.9	0	major head protein	head and packaging
UniRef90	UHGV-1465495_10	UniRef90_A0A5B7ZMF6	240.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1465495_10	742821.HMPREF9464_01831	256.0	0	Phage capsid family	N/A
Pfam	UHGV-1465495_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1465495_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1465495_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1465495_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1465495_11	K06904	145.7	4.2039e-43	N/A	N/A
PHROG	UHGV-1465495_11	phrog_80	150.4	1.4013e-44	head maturation protease	head and packaging
UniRef90	UHGV-1465495_11	UniRef90_A0A5B7ZLN2	140.0	1.1e-37	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1465495_11	742821.HMPREF9464_01832	135.0	7.13e-37	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1465495_11	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1465495_11	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1465495_11	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1465495_11	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_12	phrog_12	279.8	0	portal protein	head and packaging
UniRef90	UHGV-1465495_12	UniRef90_UPI001600F39C	291.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1465495_12	742821.HMPREF9464_01833	286.0	0	Phage portal protein	N/A
Pfam	UHGV-1465495_12	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1465495_12	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1465495_12	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1465495_12	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_13	phrog_9	435.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1465495_13	UniRef90_A0A6L6YGT4	593.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1465495_13	742821.HMPREF9464_01834	591.0	0	Terminase	N/A
Pfam	UHGV-1465495_13	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1465495_13	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1465495_13	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1465495_13	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_14	phrog_83	100.7	1.5e-29	terminase small subunit	head and packaging
UniRef90	UHGV-1465495_14	UniRef90_R5EL15	299.0	0	Putative phage terminase small subunit protein	N/A
eggNOG-mapper	UHGV-1465495_14	380358.XALC_2399	100.0	4.75e-25	Phage terminase, small subunit	N/A
Pfam	UHGV-1465495_14	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-1465495_14	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-1465495_14	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1465495_14	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-1465495_15	K07451	51.0	0.000000000000027	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1465495_15	phrog_144	110.6	1e-32	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_15	UniRef90_R5EZA4	262.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1465495_15	646529.Desaci_1289	136.0	5.63e-40	HNH endonuclease	N/A
AcrCatalog	UHGV-1465495_15	cluster_19695	66.6	7.68e-17	NA	N/A
Pfam	UHGV-1465495_15	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1465495_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1465495_15	PF01844,COG1403	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1465495_18	1410676.JNKL01000001_gene891	108.0	1.66e-26	Transposase DDE domain	N/A
COG	UHGV-1465495_18	COG5421	N/A	N/A	Transposase	N/A
PHROG	UHGV-1465495_19	phrog_6191	49.7	0.0000000000000058	N/A	unknown function
KOfam	UHGV-1465495_21	K01185	104.0	2.1e-30	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-1465495_21	phrog_7	123.5	2.1e-36	endolysin	lysis
UniRef90	UHGV-1465495_21	UniRef90_R5EL25	308.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1465495_21	243365.CV_0727	107.0	1.42e-27	Phage lysozyme	N/A
Pfam	UHGV-1465495_21	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-1465495_21	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
structural_annotation	UHGV-1465495_21	PF00959,MF_04110,COG3772	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_22	phrog_126	50.8	0.000000000000025	holin/anti-holin	lysis
UniRef90	UHGV-1465495_22	UniRef90_R5EZB5	197.0	0	Phage holin lambda family protein	N/A
Pfam	UHGV-1465495_22	PF05106	N/A	N/A	Phage holin family (Lysis protein S)	Phage_holin_3_1
structural_annotation	UHGV-1465495_22	PF05106,TIGR01594	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_23	phrog_5783	289.1	0	N/A	unknown function
UniRef90	UHGV-1465495_23	UniRef90_R5EXU3	459.0	0	NYN domain-containing protein	N/A
eggNOG-mapper	UHGV-1465495_23	1410676.JNKL01000034_gene1850	420.0	0	NYN domain	N/A
Pfam	UHGV-1465495_23	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-1465495_23	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-1465495_23	PF01936,TIGR00288,COG1432	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465495_25	PF06530	N/A	N/A	N/A	N/A
KOfam	UHGV-1465495_26	K01160	59.4	1.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1465495_26	phrog_140	116.8	1.6e-34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_26	UniRef90_UPI001C62ED2C	188.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1465495_26	742823.HMPREF9465_00230	96.3	1.61e-23	Holliday junction resolvase	N/A
Pfam	UHGV-1465495_26	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1465495_26	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1465495_26	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1465495_27	K02314	246.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1465495_27	phrog_19	243.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_27	UniRef90_UPI001C62C367	174.0	1.4013e-45	replicative DNA helicase	N/A
eggNOG-mapper	UHGV-1465495_27	762983.HMPREF9444_01711	171.0	4.2039e-45	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	N/A
Pfam	UHGV-1465495_27	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1465495_27	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1465495_27	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1465495_27	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465495_28	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_29	phrog_270	48.5	0.00000000000017	replication initiation protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1465495_29	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1465495_29	PF05584,MF_01177,NF040939,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_30	phrog_8008	40.8	0.000000000026	DNA binding protein	DNA, RNA and nucleotide metabolism
KOfam	UHGV-1465495_31	K01356	52.1	0.000000000000012	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1465495_31	phrog_4	137.1	1.50001e-40	transcriptional repressor	transcription regulation
UniRef90	UHGV-1465495_31	UniRef90_R5EL49	246.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1465495_31	469610.HMPREF0189_01093	151.0	8.33773e-43	Peptidase S24-like	N/A
Pfam	UHGV-1465495_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1465495_31	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1465495_31	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1465495_31	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_32	phrog_6191	45.8	0.000000000000013	N/A	unknown function
UniRef90	UHGV-1465495_33	UniRef90_A0A2X0V9I1	68.9	0.0000000000000799	Predicted transcriptional regulator	N/A
Pfam	UHGV-1465495_33	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1465495_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1465495_35	phrog_434	217.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_35	UniRef90_A0A2X0VDL9	140.0	1.13e-34	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1465495_35	202956.BBNL01000011_gene2401	139.0	1.69e-35	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-1465495_35	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-1465495_35	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1465495_35	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1465495_36	phrog_4171	47.1	0.00000000000036	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1465495_36	940282.CADQ01000022_gene2093	55.5	0.00000451	N/A	N/A
PHROG	UHGV-1465495_40	phrog_1891	78.4	1.2e-26	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_40	UniRef90_R5EXZ0	469.0	0	N/A	N/A
eggNOG-mapper	UHGV-1465495_40	696281.Desru_1079	79.0	0.00000000000000771	HNH endonuclease	N/A
Pfam	UHGV-1465495_40	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1465495_40	PF13392,COG3415	N/A	N/A	N/A	N/A
KOfam	UHGV-1465495_41	K01520	106.3	3.3e-31	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1465495_41	phrog_135	101.4	8.3e-30	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465495_41	UniRef90_A0A316SBG7	182.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1465495_41	1282887.AUJG01000016_gene1113	105.0	1.99e-26	N/A	N/A
Pfam	UHGV-1465495_41	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1465495_41	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1465495_41	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
Pfam	UHGV-1465495_42	PF05930	N/A	N/A	Prophage CP4-57 regulatory protein (AlpA)	Phage_AlpA
COG	UHGV-1465495_42	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
PHROG	UHGV-1465495_43	phrog_3423	55.1	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-1465495_43	UniRef90_UPI000362C6BC	65.5	0.00000000000234	integrase arm-type DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1465495_43	696748.ASU2_00435	72.0	0.0000000000000705	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1465495_43	PF13356	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_3
COG	UHGV-1465495_43	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-1465495_44	phrog_177	121.8	0	tail protein	tail
UniRef90	UHGV-1465495_44	UniRef90_A0A524BF35	156.0	1.76999e-40	Baseplate protein	N/A
eggNOG-mapper	UHGV-1465495_44	742821.HMPREF9464_01822	168.0	0	Tail protein	N/A
Pfam	UHGV-1465495_44	PF21683	N/A	N/A	Mu phage baseplate assembly protein GpP-like, N-terminal	GpP-like_1st
COG	UHGV-1465495_44	COG4379	N/A	N/A	Mu-like prophage tail protein gpP	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1465495	Yes	33,637	37	100	1
UHGV-1379041	No	36,148	37	81	1