Viral OTU vOTU-060083

vOTU: vOTU-060083

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-060083
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00206 → vGENUS-08819 → vSUBGEN-09383 → vOTU-060083
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0211638
Biosample ID	N/A
Length	44,836 bps
CheckV Completeness	99.90% (High-quality)
CDS Count	68
CDS Density	91.09%
tRNA Count	2
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0211638_1	phrog_606	47.3	0.00000000000021	terminase small subunit	head and packaging
UniRef90	UHGV-0211638_1	UniRef90_UPI001C012D23	169.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0211638_1	931276.Cspa_c57180	61.2	0.00000000161	DNA-packaging protein gp3	N/A
Pfam	UHGV-0211638_1	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0211638_1	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_3	phrog_6244	44.6	0.0000000000031	N/A	unknown function
eggNOG-mapper	UHGV-0211638_3	1354300.AUQY01000005_gene215	116.0	6.28e-33	N/A	N/A
UniRef90	UHGV-0211638_6	UniRef90_UPI001C02D1DF	125.0	5.26e-36	winged helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0211638_6	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-0211638_6	PF20075,TIGR02612,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_7	K14060	111.5	1.1e-32	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0211638_7	phrog_125	130.5	1.2e-38	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_7	UniRef90_UPI001C023A41	303.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0211638_7	1211817.CCAT010000083_gene1704	163.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0211638_7	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0211638_7	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0211638_7	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211638_9	742738.HMPREF9460_00886	89.7	6.67e-20	N/A	N/A
structural_annotation	UHGV-0211638_9	TIGR03826	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_11	phrog_1233	80.3	2.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0211638_11	1232443.BAIA02000078_gene33	125.0	5.8e-36	N/A	N/A
PHROG	UHGV-0211638_12	phrog_38	190.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0211638_12	UniRef90_A0A810QA10	662.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0211638_12	1298920.KI911353_gene2682	430.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0211638_12	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0211638_12	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_12	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_13	phrog_3377	186.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_13	UniRef90_A0A3Q9RLP4	142.0	1e-38	Deoxyuridine 5'-triphosphate nucleotidohydrolase family protein	N/A
eggNOG-mapper	UHGV-0211638_13	397290.C810_05173	137.0	2.05e-37	N/A	N/A
PHROG	UHGV-0211638_14	phrog_64	200.7	0	portal protein	head and packaging
UniRef90	UHGV-0211638_14	UniRef90_UPI001C02F349	669.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0211638_14	1123263.AUKY01000015_gene1609	423.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0211638_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0211638_14	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_15	phrog_478	128.9	2e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0211638_15	UniRef90_A0A373Q857	169.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0211638_15	478749.BRYFOR_08526	98.6	9.84e-25	N/A	N/A
PHROG	UHGV-0211638_17	phrog_1328	114.5	7.7e-34	major head protein	head and packaging
UniRef90	UHGV-0211638_17	UniRef90_UPI00164DD2D5	551.0	0	N/A	N/A
eggNOG-mapper	UHGV-0211638_17	665956.HMPREF1032_03619	224.0	0	N/A	N/A
Pfam	UHGV-0211638_17	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0211638_17	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211638_18	UniRef90_UPI00164E20D5	156.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0211638_18	1298920.KI911353_gene2658	58.5	0.000000000976	N/A	N/A
Pfam	UHGV-0211638_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0211638_18	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211638_19	1121866.AUGK01000003_gene1432	80.5	1.18e-17	N/A	N/A
eggNOG-mapper	UHGV-0211638_20	1298920.KI911353_gene2654	77.8	0.00000000000000114	N/A	N/A
structural_annotation	UHGV-0211638_21	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_22	phrog_158	46.5	0.00000000000061	major tail protein	tail
UniRef90	UHGV-0211638_22	UniRef90_D7GNW1	132.0	6.41e-37	Phage tail protein	N/A
eggNOG-mapper	UHGV-0211638_22	1158607.UAU_01767	51.6	0.00000348	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0211638_22	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211638_23	UniRef90_A0A847YX95	105.0	2.87e-27	N/A	N/A
eggNOG-mapper	UHGV-0211638_23	1123263.AUKY01000015_gene1618	80.1	4.86e-18	N/A	N/A
Pfam	UHGV-0211638_23	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0211638_23	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211638_24	1121333.JMLH01000047_gene1011	83.6	1.34e-18	N/A	N/A
PHROG	UHGV-0211638_25	phrog_1535	266.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0211638_25	1121866.AUGK01000003_gene1437	375.0	0	phage tail tape measure protein	N/A
COG	UHGV-0211638_25	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0211638_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_26	phrog_1194	77.9	1.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0211638_26	1232443.BAIA02000078_gene17	73.2	0.00000000000000502	N/A	N/A
structural_annotation	UHGV-0211638_26	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211638_27	1232443.BAIA02000078_gene16	100.0	1.45e-22	N/A	N/A
structural_annotation	UHGV-0211638_27	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211638_28	1235797.C816_04179	72.8	0.0000000000444	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0211638_28	NF041249,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_30	phrog_30133	55.3	5.8e-16	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0211638_30	1445858.A0A060AN56_9CAUD	82.4	0.00000000000006	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-0211638_31	PF03425,NF038128,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211638_35	1519439.JPJG01000060_gene1892	60.8	0.0000014	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0211638_35	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0211638_35	PF10651,NF033814,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_37	phrog_1382	77.7	6.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0211638_37	33035.JPJF01000043_gene998	71.6	1.88e-16	N/A	N/A
structural_annotation	UHGV-0211638_37	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_38	K08640	81.8	1.3e-23	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0211638_38	phrog_1493	49.7	0.000000000000047	endolysin	lysis
UniRef90	UHGV-0211638_38	UniRef90_R5EEL2	194.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0211638_38	931626.Awo_c26840	122.0	3.49e-32	Peptidase M15	N/A
Pfam	UHGV-0211638_38	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0211638_38	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0211638_38	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_38	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_39	phrog_937	55.3	0.0000000000000013	hemolysin	other
eggNOG-mapper	UHGV-0211638_39	1007096.BAGW01000017_gene814	59.7	0.000000000251	N/A	N/A
PHROG	UHGV-0211638_40	phrog_10091	99.2	3.4e-29	holin	lysis
UniRef90	UHGV-0211638_40	UniRef90_A0A374DX82	131.0	2.42e-38	Phage holin	N/A
eggNOG-mapper	UHGV-0211638_40	97139.C824_05950	124.0	3.03e-36	Bacteriophage holin	N/A
Pfam	UHGV-0211638_40	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0211638_40	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0211638_40	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_40	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_41	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_44	PF02255,NF007156,COG1447	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_45	K06400	368.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0211638_45	phrog_95	366.8	0	integrase	integration and excision
UniRef90	UHGV-0211638_45	UniRef90_UPI00164E9A6A	480.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0211638_45	718252.FP2_29980	358.0	0	N/A	N/A
Pfam	UHGV-0211638_45	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0211638_45	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0211638_45	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0211638_45	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0211638_45	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_46	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_47	phrog_8	42.8	0.000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0211638_47	UniRef90_A0A8D9UHB1	76.3	7.91e-16	Repressor protein CI	N/A
eggNOG-mapper	UHGV-0211638_47	1507.HMPREF0262_00424	65.1	0.00000000000428	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0211638_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211638_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0211638_47	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211638_49	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_53	phrog_434	289.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_53	UniRef90_UPI001D078B74	272.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0211638_53	1121344.JHZO01000003_gene985	272.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0211638_53	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0211638_53	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0211638_53	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0211638_53	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_54	K07455	297.7	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0211638_54	phrog_148	278.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_54	UniRef90_U2SBP2	368.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0211638_54	1226322.HMPREF1545_00015	368.0	0	RecT family	N/A
Pfam	UHGV-0211638_54	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0211638_54	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0211638_54	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0211638_54	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_56	K03111	138.3	8.60005e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0211638_56	phrog_44	142.9	1.90016e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_56	UniRef90_UPI001C118A83	172.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0211638_56	1226322.HMPREF1545_04080	168.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0211638_56	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0211638_56	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0211638_56	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0211638_56	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0211638_56	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_57	K01160	55.1	0.0000000000000022	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0211638_57	phrog_140	132.9	1.6e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_57	UniRef90_A0A356Z6K2	125.0	3.27e-34	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0211638_57	665956.HMPREF1032_03604	121.0	2.09e-33	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0211638_57	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0211638_57	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0211638_57	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_58	phrog_1163	228.5	0	N/A	unknown function
UniRef90	UHGV-0211638_58	UniRef90_UPI001C4F8F6A	235.0	0	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0211638_58	324831.LGAS_0583	210.0	0	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-0211638_58	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0211638_58	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0211638_58	COG1846	N/A	N/A	DNA-binding transcriptional regulator, MarR family	N/A
structural_annotation	UHGV-0211638_58	PF09524,PF01475,TIGR02220,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0211638_59	K02315	119.6	3.4e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0211638_59	phrog_50	118.0	9e-35	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211638_59	UniRef90_A0A4Z0Y679	239.0	0	DNA replication protein DnaC	N/A
eggNOG-mapper	UHGV-0211638_59	1507.HMPREF0262_00302	205.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-0211638_59	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0211638_59	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0211638_59	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_61	phrog_757	178.3	0	DNA methyltransferase	other
UniRef90	UHGV-0211638_61	UniRef90_A0A3E2U1Y9	263.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0211638_61	748224.HMPREF9436_03069	248.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0211638_61	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0211638_61	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_62	phrog_1384	124.2	8.9e-37	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0211638_62	665956.HMPREF1032_03086	280.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0211638_62	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
Pfam	UHGV-0211638_63	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0211638_64	PF11998	N/A	N/A	N/A	N/A
PHROG	UHGV-0211638_68	phrog_3972	50.3	0.000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0211638_68	1158612.I580_01895	84.0	3.91e-18	N/A	N/A
dbAPIS	UHGV-0211638_68	APIS035	N/A	N/A	Broad-spectrum counter-defense.	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0211638	Yes	44,836	51	100	1